Larimichthys crocea (large yellow croaker): 104919970
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Entry
104919970 CDS
T04659
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00450
Selenocompound metabolism
lco00970
Aminoacyl-tRNA biosynthesis
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104919970 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104919970 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104919970 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104919970 (mars)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
104919970 (mars)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104919970 (mars)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104919970 (mars)
Prokaryotic type
Other AARSs
104919970 (mars)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_N_2
GST_N_3
GST_C_2
GST_N
GST_C
GST_C_5
HTH_23
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104919970
NCBI-ProteinID:
XP_010730412
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All DBs
Position
VI:complement(14632961..14648446)
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AA seq
931 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGAKCDVQYVNHEERVVPFLSRPALPALLLPSGLHLFSS
NAICRYLFEVNGQDSSELCNQWLEWEATELQPALLQALHMAVLQGKGSEVSKVLQGPLNY
LDQSLSKKNTPYLTGEAVSVADVVLWAALYPILSDSSLALGECKSVKIWFDHGAAMHSLQ
CAAQKVLQGKGLQGMKSYMQKQPAPQSSQCRDTQPCNSSPAESEEGERLVSEEEIEAAAL
TWSKSLNACPLVANRQHPILPQEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYG
RLRDWNVLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDYFGRTT
TEKQTEIAQNIFWRLHEHGFLVEDTVEQLRCESCQRFLADRFVEGTCPHCSYPEARGDQC
DKCGRLINAVELREPQCKVCRQTPVIRSSKHLFLDLPKLETQLEQWLDKSTSTGDWTANA
KQITRSWLRDGLKPRCITRDLKWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDKWET
WWKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSR
GVGVFGDMAKDTGILSDVWRFYLLYVRPEGQDSAFSWADMATKNNSELLNNLGNFINRAG
MFVTKFFEGCVPPMELQHEDKKLLALVGWELQQYIQLMDKVKIRDALKHILNISRHGNQY
IQVNEPWKKIKGGDTERQRAGTVTGVSVNISCLLSVMLFPYMPSVSQTIRDQLNAPQSCI
NTMLQGTGAFVCALSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPPKKKTAAQA
AASAQPATVPAPAAPAAAAEVVTVSGVDPEKAKQLTQAVAEQGEKVRALKAQKAEKAVIT
AEVAKLLDLKKQLALAEGKSPEPAPQKGKKK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgagggcaacccgcattgcctgaaggtgttggctgctttagaa
gtgactggagctaaatgtgacgttcagtatgtcaaccacgaagagagagtggtgcccttc
cttagccgtccagccttgccagccctgcttctgcctagtggactgcacctattcagctcc
aatgccatctgccgatacctgtttgaagtaaatggacaagactcaagtgaactatgcaat
cagtggcttgaatgggaagccacagaattacagcctgcactgctacaggcccttcacatg
gcagtgctgcagggaaaaggatcagaggtgtccaaggtcctccagggacccctaaactac
ttggaccaaagcttgagcaagaagaacacgccatatttaactggggaagccgtttcagtt
gctgatgttgttttgtgggctgcgctataccccattttatctgactcttctctagcattg
ggtgaatgcaagtctgtgaagatttggtttgaccatggagctgctatgcatagtctccag
tgtgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgaagagctacatgcag
aagcaacctgcccctcagagcagccagtgccgagacacacagccatgcaatagcagccct
gctgagagtgaggaaggtgagcgtttggtttcagaagaggagattgaggcagctgctctc
acctggagtaaaagtttgaacgcctgcccattggttgcaaacagacaacaccccattttg
ccacaagagggcaagcgaaacctgcttgtgaccagcgccttgccttatgtcaacaacgtc
ccccacttgggcaacatcatcggttgcgtcctcagcgctgacgtcttcagcaggtacggc
cgcctgcgagattggaacgtgctgtttgtgtgtggcacagatgagtacggcacagctacg
gagaacaaggccagagaggagggtctgaccccgcagcagatctgcgacaagtatcatgcc
gttcactccagcatctacaaatggttccagattgactttgactattttggcagaaccacc
accgagaagcagacggaaatagcccagaatattttctggcgactccacgagcatggtttc
ctcgtggaagacacggtggagcagctgcgttgtgaaagctgccagcgtttccttgctgac
cgttttgtggaaggcacctgtccccactgcagctaccccgaagctcgtggtgaccagtgt
gacaagtgtgggcggctcatcaatgccgtagagctcagggaaccccagtgtaaggtctgc
aggcagactcctgtcatccgctcctccaaacatcttttcctggacctgccaaagctggag
actcagttggagcagtggctggacaagtcaaccagcacaggagactggacagcaaatgcc
aaacagatcactcgctcctggctgagagatggactcaaacctcgctgcatcaccagggac
ctgaagtggggaacgccagtacctcatcctgactttaaagagaaggtgttctacgtgtgg
tttgacgcccccattggttatctgtccattaccgccaactacaccgacaaatgggaaacg
tggtggaagaatcctcatcaggtggagctatacaacttcatggccaaagacaatgtgcca
tttcacagtgtggtgtttccctgctccctactgggtgctcaagacaactacactctggtc
aaccaccttgttgccactgagtatctgaattacgaagacactaagttctccaagagccgt
ggcgtgggtgtgtttggtgacatggccaaggacacgggcatcctgtctgatgtgtggcgg
ttctacctcctgtacgtgcgtccagagggacaggattcagccttctcctgggccgacatg
gctacgaaaaacaactctgagctgctcaacaacttgggcaacttcatcaacagagctggc
atgtttgtcactaagttctttgagggctgtgttcctccgatggagctacagcatgaagat
aagaagctcctggctctggtgggctgggagctgcagcagtacatccagctcatggacaaa
gtcaaaatccgtgatgctctgaagcacatcctcaacatctctcgccacggcaaccaatac
attcaggtcaacgaaccttggaagaagataaagggaggagacacagaaaggcagcgtgcg
ggcacagtgaccggcgtgtctgtgaatatctcctgcttgctctcagtgatgctgtttcca
tacatgccatcggtcagccaaaccatcagggatcaactcaacgccccacagtcttgcatc
aataccatgttgcaaggcactggcgcctttgtgtgtgccttgagtgccggccaccgtatt
ggcactgtcagtccgttgttccagaagctggaggtggaccagattgaggctttgaagaag
agatttggtggacagcagcctgaagatgaaccacctaaaaaaaagacggcggctcaggct
gctgccagcgctcagcctgccactgtgccagctcctgctgctcctgctgctgctgctgag
gtggtgacggtgagcggagtggacccagagaaagccaagcagctcacacaggctgtggct
gagcagggggaaaaggtgcgagcactaaaagcccagaaggcagagaaggccgtgatcaca
gcagaggtggccaaactgttggaccttaagaaacagctggctctggctgaggggaagagc
cctgagcctgcacctcagaagggcaagaagaagtga
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