Larimichthys crocea (large yellow croaker): 104919978
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Entry
104919978 CDS
T04659
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00260
Glycine, serine and threonine metabolism
lco00630
Glyoxylate and dicarboxylate metabolism
lco00670
One carbon pool by folate
lco01100
Metabolic pathways
lco01200
Carbon metabolism
lco01230
Biosynthesis of amino acids
lco01240
Biosynthesis of cofactors
lco04981
Folate transport and metabolism
Module
lco_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
104919978 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104919978 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104919978 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104919978 (shmt2)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
104919978 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
104919978
NCBI-ProteinID:
XP_010730423
UniProt:
A0A6G0J436
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Position
VI:14973197..14995705
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AA seq
500 aa
AA seq
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MLSFALRQLTRPLCHRAPVRLSVRGQQSHAARSVDEDRPWTGQESLAQDDPEMWDLLQKE
KDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKRA
LEAFDLDPALWGVNVQPYSGSPANFAAYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKRI
SATSIYFESMPYKLNIKTGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCTE
IKAYMLSDMAHISGLVAAKAIPSPFEYSDLVTSTTHKSLRGARAGLIFYRKGVRSVDKKG
KEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALKQAQSPMFKEYIAQVLKNSKAMAAA
LLSKGYTVVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGL
RLGAPALTSRQFKEADFEHVVEFMDEGFKIALDVKKKTAKLQDFKNFLLEDPETVARIAD
LRHRVEAFARPFPMPGFHDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctttgagacaactcacacggccactgtgccaccgagccccagttcgt
ctcagtgtacgtggccagcagtcccatgctgctcgttcagtggatgaagatcgaccatgg
acaggccaggaaagcctggctcaggacgaccccgagatgtgggatctgctgcaaaaggag
aaggacaggcagtgccgcggcctggagctcattgcatctgagaatttctgcagtcgagca
gctctggaggctcagggctcctgtctgaacaacaaatattctgaaggctacccagggaga
agatactatggtggagcagaagtggtcgaccaaattgagctgctgtgtcagaaacgagcc
ttggaggcctttgacctggacccagctctgtggggcgtcaacgtccagccatactccgga
tcccccgctaactttgcagcctacaccgccgtgctgaagccccatgaccgcatcatgggc
ctggacctgcctgacggtggacatctgacccatggctacatgtccgacgtaaagaggatc
tcagcaacttcaatctattttgagtccatgccgtacaagctgaatattaaaacaggactc
atagactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatcgct
ggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtaccgag
atcaaggcctacatgctatctgacatggctcatatcagtggcctggtggcagcaaaagcc
atcccctctcccttcgaatattctgacctggtcacctctaccacacacaaatccctcaga
ggagccagggctggtctcatcttctaccgtaagggtgttcgctcagtggacaagaagggt
aaggagatcatgtacgacctcgaggacaaggtcaacttctccgtcttcccctccctgcag
ggtggacctcataaccatgccatcgccggtgtggctgtggcactcaaacaggcacagtct
cccatgttcaaggagtacatcgcccaggtgctgaagaactccaaggctatggctgcagct
ctcctcagtaaaggctacacagtagtatcaggtgggaccgaaaaccacctggtcctggtg
gacctgcggcctaagggcattgacggcgctcgggctgagagggtgctggagctcgtgtca
atcactgccaataagaacacctgccccggggacaagagcgccctgactcctggtggcctc
aggctaggtgctccggccctaacctccaggcagttcaaagaagctgacttcgagcatgtt
gtcgaattcatggatgagggcttcaagattgccttggatgtcaagaaaaagacagccaag
ctccaggacttcaagaacttcctccttgaggacccagagactgtggctcgcattgccgat
ctgcgtcacagagttgaagcttttgccagacccttccctatgccaggcttccatgaccat
tag
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