Larimichthys crocea (large yellow croaker): 104920003
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Entry
104920003 CDS
T04659
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03420
Nucleotide excision repair
lco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104920003
09124 Replication and repair
03420 Nucleotide excision repair
104920003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104920003
03400 DNA repair and recombination proteins [BR:
lco03400
]
104920003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104920003
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104920003
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104920003
TCR (transcription coupled repair) factors
Cul4-CSA complex
104920003
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104920003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
104920003
NCBI-ProteinID:
XP_010730455
UniProt:
A0A6G0J102
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Position
VIII:complement(26094491..26103618)
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AA seq
764 aa
AA seq
DB search
MAEDTRQDKRDRASFSAITEHNTNGMARTSSTSSAAVASSKTGASKKLVIKNFKDRPKLA
ENYTEDTWLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQ
AQIHQFREESLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGL
ELFRTHIVSDSAVQKRTVDGILEQIELERNGETIDRSLLRSLLGMLSDLQVYKDSFEERF
LIETNRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRIMSYLDQSTQKPLVSCVEKQLL
GEHMTAMLQKGLSTLLDENRVTELTLLYQLFNKVKGGLPTLLQFWRDYIKSFGGEIVCTP
EKDKDMVQDLLDFKDKMDNVAQSCFTRNEGFINAMKEAFETFINKRPNKPAELIAKYVDS
KLRAGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSM
LSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYIQNQSEPSNIELTVNILTMGYWPS
YTPMEVHLPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHSVLKAEFKEGKKELQVSLFQ
TLVLLMFNEGEEFSMEEIRTATGIEEGELKRTLQSLACGKARVLNKNPRGKDVEDGDRFN
FNNDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLL
VSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacacccgacaggacaagagagacagagccagcttctctgccataacggag
cacaacaccaacgggatggccaggacctcctccacctcctcggctgctgtggcctcaagc
aaaactggagcttcaaagaaattagtcatcaaaaatttcaaagacaggccaaaactagcc
gagaattacaccgaggacacgtggctgaagctacgggatgcggtgggtgccatccagaac
agcacctcgatcaagtacaatctggaggagctctatcaggcggtagagaacctctgctcg
tataaagtctccccgacgttgtacaagcagctacggcaggtctgtgaagatcatgtgcag
gcccagattcaccagtttagagaagagtctttggacaacctttccttcctgaagcgaatg
aatcgctgctggcaggaccactgcagacaaactataatgatccgaagtatctttctcttt
ctggatcgcacatatgtacttcagaactccctactcccctccatctgggacactgggctg
gaactgtttcgtacccacattgtgagtgacagtgcagttcagaagcgtacagtagatggc
attttggagcagatagaacttgagcgcaatggagagacgatagaccgcagcctgctcaga
agtctgctgggcatgctgtcagacctacaggtttacaaagattcctttgaggagagattt
ttgattgagaccaatcgcctgtatgcagcagagggacagcggctgatgcaggagagagat
gtgcccgagtacctgcatcacgtggctcgtcgactggaggaggagaatgatcgcatcatg
agctacctcgaccagagcactcagaaaccacttgttagctgtgttgagaaacaactttta
ggagaacatatgactgcaatgctacaaaagggtctgagcaccctgctggatgagaaccgt
gtgactgagctgaccctcctctatcagctcttcaacaaggtgaagggaggacttcctaca
ctgcttcagttctggagagattacataaagtccttcggtggagagattgtatgtactcca
gagaaagacaaggacatggtacaagacctgctggacttcaaggacaagatggacaacgtg
gcacagagctgttttacacggaacgagggattcatcaacgccatgaaggaagcctttgag
acctttataaacaagaggcccaacaaacctgctgaacttatcgctaaatatgtggattca
aagttaagagcagggaacaaggaggctacagaggaggagctggagaggatcctggacaag
ataatgataatcttccgtttcatacatggaaaagatgtgtttgaagctttttacaagaag
gacttggccaagcgtctgctggttggcaagagtgcttctgttgatgctgaaaagtctatg
ctctccaagctcaaacacgaatgcggagctgcatttaccagtaagctagaggggatgttc
aaggacatggagctgtccaaagacataatgatccagttcaaacagtatatacagaaccag
agtgaaccgagcaacatagaacttactgtcaacatcctcaccatgggttactggccttca
tacacacccatggaggtccacttgcccccagagatggtaaaactccaggaagtgttcaag
ctgttctacctggggaagcacagtgggaggaagctgcagtggcagcccacgctgggccac
tctgtactaaaggcagagtttaaagagggtaagaaagagctgcaggtctccttgttccag
acactggtgctactgatgttcaatgagggagaggaattcagcatggaggagattcgcact
gccactggcatagaggaaggagagctcaagcgtacgctgcagtccctggcctgtgggaaa
gcacgcgtcctcaataagaaccctcgtgggaaagacgtggaggatggagaccgtttcaat
ttcaacaatgatttcaaacacaaactcttccgcatcaagatcaaccagatccaaatgaag
gaaacggtggaggagcaggtcagcaccacggagcgtgtgttccaagacaggcagtatcag
attgatgctgctgtggtgcgcatcatgaagatgaggaagaccctcagtcacaacctgctc
gtatcagagctctacaaccagctaaagttccccgtcaagccgggggatctgaagaagcgg
atcgagtcgcttatagacagagactacatggagcgtgacaaggagactcctaatcagtac
cactatgttgcctga
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