Larimichthys crocea (large yellow croaker): 104920009
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Entry
104920009 CDS
T04659
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4 isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04080
Neuroactive ligand-receptor interaction
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104920009
04082 Neuroactive ligand signaling
104920009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104920009
Ion channels [BR:
lco04040
]
Ligand-gated channels
GABA-A
104920009
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
104920009
NCBI-ProteinID:
XP_027129050
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Position
XXII:15233531..15424309
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AA seq
519 aa
AA seq
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MLGRQEDKLCGISSALAALSFLCFVQSSSTGSTGMSVAKTTVDKLLKGYDIRLRPDFGGP
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFFWQGGDDAVTGVDKLELPQFSIVDIRLVSRAVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKINERLNKANNERTRYEEK
PLREQDSISVPFQTNTFRSFTQRRNLYHEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSHHSLDRSAMRSRANCRLRRRSSK
LKLKIPNLSDVSTIDKWSRVIFPITFGFFNLIYWLYYVN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgtcaagaagataaattatgtggaatttcctctgctctggcggctttgtcc
ttcttatgctttgttcaaagctcctccactggaagcaccggaatgtctgtggccaagact
accgtggacaagttgctgaagggatatgacatccgtttaaggcctgattttggaggtcct
ccagtcatcgtaggaatgagcatcaacatagcaagcatcgactccatctcagaagtaaac
atggactacaccatcacaatgtatttccagcagagctggcgagataagcgtttggcgtat
ggtgagctgaaactaaacctgactctggacaaccgtgtagcagaccagctttggctccct
gacacctacttccttaatgacaagaagtcctttcttcacggcgtgacagtaaaaaatcgt
atgatccgactgcaccctgatggcaccgtcttatacgggctgagaataactaccactgct
gcttgcatgatggacttgaggaggtaccctcttgatgaacagaactgcaccctggaaatt
gaaagctacggatataccacagatgacatcgtattcttctggcaaggaggagacgacgct
gtgacgggagttgacaaattagagttacctcagttctccatcgtagacatccgcttggtg
tccagggcggtcaggtttactacaggttcatatccaagactttcgctgagtttcaggatt
aagaggaacattggatatttcatcctgcagacatatatgccctccatcttgatcaccatc
ctctcctgggtctctttctggatcaattatgatgcctctgcagctcgggtggccctgggt
gtgacaacggtgcttaccatgacaacaattaacacccaccttagggagactctcccaaag
attccgtatgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctg
gccctgctcgaatatgcctttgtaaattacgtgttctttggccggggccctgcgcaacag
aagaaaatcaatgagaggctgaacaaagccaacaacgagcgcacaagatatgaagagaag
cccctgagggaacaggactccatttccgtgccgtttcaaaccaacaccttcaggtcattt
acacagcgaagaaatctgtatcacgaggaacaaagaaaagttggggtggatgcttacgga
aacatcctcctcaccacgctggaaatgaacaacgaagtgatgccttctgacgtgggaagc
agcgtcagtgactctcggaattcagtcatgtccttcgacagctccggggtccaattcagg
aagccgatggcgccccgagatggcttcagccaccactcgctggaccggagccaccactcg
ctggaccggagcgccatgcggagccgggccaactgtcggctacggcgacgctcctccaag
ctcaagttgaaaatcccaaacctgtcagatgttagcaccattgacaagtggtcccgggtc
attttccctatcacctttggatttttcaacctaatctactggttgtactatgtgaattga
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