Larimichthys crocea (large yellow croaker): 104920045
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Entry
104920045 CDS
T04659
Name
(RefSeq) phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00564
Glycerophospholipid metabolism
lco00565
Ether lipid metabolism
lco01100
Metabolic pathways
lco04144
Endocytosis
lco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
104920045
00565 Ether lipid metabolism
104920045
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104920045
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104920045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104920045
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
104920045
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104920045
Endosome - Golgi transport
Others
Others
104920045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
DBD_HTH
Motif
Other DBs
NCBI-GeneID:
104920045
NCBI-ProteinID:
XP_019125460
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All DBs
Position
XXIV:397019..422933
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AA seq
1054 aa
AA seq
DB search
MLGKAPPTTSNLNLVNSEAFDNTVATDARNCINMADLVESLDTRELDMGEGEEMDYEGNS
IGDQRLQFSAVYNTVGFKEASAKVYLPTVPITARILEVERFTTAQDRFNLTHHRSVNKSL
PAVFRIELKHGEFTWVIKRKEKHFMELHRELRTYKTFMRIPLPSRSHTVRRRTVRKSEVR
EMPSLPRGGGDDLVRDEQVSSRRRQLEDYLNKLLRMAMYRKYHHTMEFIDVSQLSFIHDL
GPKGLEGMIYKRSGGHRIPGMNCCGHSQACYRWSKRWLVVKDSCLLYMKPDSGAISFVLL
LDKEFSIKMDSKDTETKHGVRIESLSRTLVFKCSSYRHARWWGQSIESFVRSHGKAFLRD
HRFGSFAQEQENIPAKWYVNGKTYMEDVADALEEAKEEIFITDWWLSPEIFLKRPVVEGN
RWRLDCTLRRKAQQGVRIFVMLYKEVELALGINSGYSKRTLMHLHPNIKVMRHPDHVSSS
VYLWAHHEKIVVIDQSVAFVGGIDLAYGRWDDREHRLTDVGSVTRSVALEQAATNNAPSS
KSVSSVDAISTSNGQGTPPSDPVDLPKLKGVGRNRKSRFSLYRHLHKHSLQHADSVSSVD
SAGSGSVQSLKTGVGELQGNTRFWHGKDYCNFVYKDWIQLEKPFDDFIDRYQTPRMPWHD
IASVVHGRAARDVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSHSTANELKYQVPDCVDA
KVQVLRSSADWSAGIKYHEESIHNAYIQVIAKSKHYIYIENQFFISCADNRMVFNKIGDA
IIERIIRAHKEGKKYRVYVVTPLLPGFEGDITTGGGNALQAVMHFNYRTMIRGDHSIISQ
LKKEMDDQWMNYISFAGLRTHAELEGRLVTELIYVHSKMLIADDNTVIIGSANINDRSML
GKRDSEVAVIIEDSEKVAAVMDGQEYEAGPYALQLRLECFRTILGGHTDTGIDLSDPISD
RFYKEVWMTTAGRNATIYEKVFRCLPSSLVRNMSELEQYQSKPGLAQTDKTRAQEELRKI
RGFLVQFPLDFLSEQNLMPSVGTKEAMVPTEIWT
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtaaggctccacccacgaccagtaacctcaacctggtgaactctgaagctttt
gacaacacggttgccacggacgcacgcaactgtatcaatatggccgaccttgtggagagc
ctggataccagagagctggacatgggagagggagaagagatggactatgaaggaaattcc
ataggtgaccagcgtctccaattttcagcggtgtataacacggtgggctttaaggaggcc
agtgctaaggtctacctgcccactgtgcccatcactgctcggatcctggaggtggagagg
ttcaccaccgcgcaagaccgcttcaacctgacgcaccacaggagtgtgaacaagtctctg
ccagcggtgtttcggatcgagctgaaacatggcgagtttacctgggtgatcaagaggaag
gagaaacatttcatggagctccacagagagctgaggacgtacaagactttcatgaggata
ccgctgccgtcacgcagccacacagtgaggagaaggacagtgaggaagagcgaagtgagg
gagatgccatccctgccgaggggagggggcgacgacctggtgcgagacgaacaggtttcc
agcaggaggagacaattagaagactatttgaacaagctgctgaggatggccatgtaccgc
aaatatcaccacactatggagttcattgatgtcagccagctgtcatttattcacgacttg
ggacccaaaggactggaagggatgatctataagcgttcaggcggacatcgcatccctggc
atgaactgctgtggtcacagccaggcctgctaccgctggtccaaacgctggctggtggtg
aaggactcatgcctgctgtacatgaagccggactctggggccatctcctttgtcctgctg
ttggataaagagttcagcatcaagatggactccaaagacacagagaccaaacacggagtc
cggattgagagcctttccaggactctggtgtttaagtgcagcagctacagacacgcacgc
tggtggggtcagagtatcgagagcttcgtgaggagccatgggaaagctttcctacgagat
caccgctttggatcgtttgcacaggaacaggaaaacatccctgccaaatggtacgttaac
ggaaagacttacatggaggatgtggctgacgccttggaggaggctaaagaagaaatattt
atcactgactggtggctgagtccagagatattcttgaagagacctgtcgtagagggcaac
aggtggaggctagactgcaccctcaggcgcaaagcacaacagggagttcgcatctttgtg
atgttgtataaggaggtggagctcgcgctgggcatcaactccggctacagcaagagaacc
ctcatgcacctgcatcccaacatcaaggtgatgcgtcatccagaccacgtctcctcctcc
gtttatctgtgggcgcatcacgagaagattgtcgtcatcgaccaatcggtggcattcgtg
ggcgggattgacctggcgtacggacgctgggatgacagagaacaccggctgacggatgtt
ggcagcgtgactcgttccgtggccctggagcaggccgccaccaacaacgctccatcctcc
aagagcgtgtcctccgtcgatgccatctccacgagcaacggacaagggaccccgcctagt
gatccggtggacttgcccaagctgaagggggtcggacgcaacaggaagtctcgcttcagt
ctgtacagacacctgcacaagcacagtctgcagcatgcggacagcgtcagcagcgtggac
agcgcagggagtggttcagtgcaaagcctgaagacgggtgttggagagttacagggtaac
acgcgcttctggcatggaaaagactactgcaactttgtctacaaggactggatccagttg
gagaaaccttttgatgacttcatcgacaggtaccaaactcccagaatgccctggcacgac
atcgcctcagtggttcatggcagagctgctcgggatgtggccagacacttcattcagcgc
tggaacttcactaagatcatgaagccaaagtatcgctctctgtcttatccattcctgctg
cccaagtctcactccaccgccaatgagctcaaataccaagtccctgactgtgtggatgcc
aaagtgcaggtgctgcggtcatcagcagattggtcggcaggcataaagtaccacgaggag
tccatccataatgcctacatccaggtcatcgctaagagcaaacactacatctacatagag
aaccagttcttcatcagctgcgccgacaacaggatggtcttcaacaagatcggagacgcc
atcatcgaaaggatcatccgagcgcacaaggagggtaagaagtaccgtgtctatgtcgtc
acccctctgcttcctggattcgaaggagacatcaccacgggaggagggaacgccctgcag
gctgtcatgcacttcaactacagaaccatgatcagaggagaccactccatcatctcccag
ctgaaaaaggagatggacgaccagtggatgaactacatctccttcgccggtctgcggact
cacgctgagctggagggacgcctggtgacagagctcatctacgtccacagcaagatgctc
atcgctgacgacaacacagtcatcatcggttctgctaacatcaacgacaggagcatgctg
ggtaaacgcgacagcgaggtggcggtgatcattgaggactcggaaaaggttgccgcggtg
atggacggacaggagtatgaagccggaccctacgcacttcagcttcgcctcgaatgcttc
aggactatcctaggaggccacacggacaccggtattgacctgtctgaccccatcagtgat
cgcttctataaggaggtgtggatgaccacagctggccgcaatgccaccatttatgagaag
gtgtttcgctgccttccttcgtccctggtgaggaacatgtccgagctggagcagtaccag
tccaaaccgggtttggcccagaccgacaagactcgcgctcaggaggagctgcgcaaaatc
cgtggcttcttggtccagtttcctcttgacttcctgtctgagcagaacctcatgccctct
gttggaacgaaggaggccatggtcccaactgagatctggacataa
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