Larimichthys crocea (large yellow croaker): 104920234
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Entry
104920234 CDS
T04659
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
lco
Larimichthys crocea (large yellow croaker)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
104920234
NCBI-ProteinID:
XP_010730731
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Position
VIII:1860047..1880306
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AA seq
1109 aa
AA seq
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MGQRAALLLSELLLLLLTASRTLLAVSFPEDTVPLDVVDAHFARRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADKEMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVWT
PYPEEKLPKPRPGCCAGHGPAASFKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKILAKTSSMSLNDSLLLEEIDVFNKA
KCLSNHEDDKRVLSLHVDKDAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
KPHGACERIQPGVLTEYEQDIELGNTAHLGDCQAFLGTTSAPDYKSFGDPTSDMEFSSAP
VTVHPSEPIHPPVLIPTQSPSSGPGPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDIQA
GETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAESAPSCSDSTG
SFVKLNGLFDSPVKEYQTNIDSPKLYTNLLSNGKDLNAPNSDTKTMILRDGCQPPELAAL
PTPESTPVLQQKGLQPIKNQWERAQGSSGPRKEANSSAKSPQFLPSSPAPPNANSHQPHL
TLGHSHIPSAVVLPNATHEYPNLDNGEDTLPHSSEKKLKNSDSKGSRKEQKRSVDARNTL
NDLLKHLNDSVANPKAILQEGSGPRPRQHLALEPMEELTEVPPRVPSREASLYSPSSSLP
RHSPTKRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRHSLSTSPNAVTMGVS
VSRQHSMNRGGYIPPTPPSRLDSHGGVMGAGMHSPHPPSLSRQSSYSGHCSLPRTGLKRT
PSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgcttctgctcagtgagctgcttctgctgctgctgacagcctca
cgcactctcctcgcagtcagcttcccagaggacaccgtacccctcgacgtcgttgacgca
cactttgcacggaggtaccctgtgttcagaggcaggccctctggcaacgagtcacagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcatcgctggcagagat
caggtgtacctcgtcagtctgagagaatcctacaggaatgagatcattccttaccggaag
cttacatggcgatcgggccaagctgacaaagagatgtgtgccgtcaaaggaaaacacaga
gatgagtgccacaacttcatcaaagtactggttcccagaaacgatgatctggtgttcatc
tgtggtaccaacggcttcaatcccatgtgcagatactacaggctggataacctagagttt
gatggcgaggagatcaatggactggcacgatgcccatttgactccaagcaaaccaacgtt
gcccttttcgctgaggggaagctgtattctgcaactgtagctgacttccaggccagtgat
tcggtcatctatcgcagtatgggtgatggatcagccttgaggaccatcaaatatgactcc
aagtggctgaaagaacctcatttcctgcatgcagccgagtatgggaattatgtgtacttt
ttctaccgggagattgctgtggagcacagcaatctgggcaaggttgtgtattctcgtgtg
gcccggatctgtaagaacgatgtcggagggtcacagcgagtgctggagaagcactggacg
tcttttgtgaaggcgaggctgaactgctccgtgccaggggagtctttcttctacttcgat
gtgcttcagtccatcactgacatcatcaacatcaacggagttccctctgtggtgggagtg
ttcacgacacagatgaacagtatcccagggtcagcagtgtgtgccttctccatggccgac
atcgagaaagtattctggggtcggttcaaagaacagaagacccctgactctgtgtggacg
ccatatccagaggagaagctgcccaaacctcgacccgggtgctgtgcaggtcacggtcca
gctgcatccttcaagagctccatcgagttcccggacgataccctgcagttcatcaagtcc
caccccctcatggacacagctgtgccttctattggggatgagccatggttcaccaagact
cgcgtcaggtacagactgacagcactggctgtggacaatgaagcaggacctcacaagaac
tacacagtggtgtttatcggggctgaatcaggggtcgtcctcaagattttggcgaagact
tcctccatgtccctgaatgacagcctgcttttagaggagatagatgtcttcaacaaggca
aagtgcctgtctaaccatgaggatgacaagcgtgtcctctcgctgcacgtggacaaagac
gcacacagcctgtatgtcgccttttcaagctgtgtcatccgcattcccctgagtcgctgt
gaaaggcattcttcctgccacaagtcctgcattgcatcaagggatccttactgtggctgg
aagcctcacggagcctgtgagaggatacagcctggtgttttgactgaatatgagcaggac
attgaattaggaaacacggcccacctgggagactgtcaagcgtttttgggcactacatca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatcagcgcca
gtcactgtccaccccagtgagcccatacaccccccagtactcatacccactcagagcccc
agctctggacctggtccagagctctacggctcaggctttgtgctgcaggatgacccagcc
acctcccattctttagactctatcccaggggggcaagagggtgtttgggatatccaagca
ggcgagaccaaccagatggtccacatgaacatcctcatcacctgcgtgtttgctgctttt
ctcatgggcgctctcctggctggtctgattgttttctgctatcgagattcattcctccgt
aagccaagacgtgtccacaaggatgcagagtcggcaccgtcctgctcagactccactgga
agctttgtcaagctcaacggcctctttgacagccctgtaaaggagtaccaaaccaacatc
gattctcccaagctgtacaccaatctgctgagcaatggcaaagacctgaatgcacccaac
agtgacaccaagaccatgatcctacgggacggttgtcaacccccggagctggctgctctg
ccaacacctgagtcaacccctgtgcttcagcagaaaggcctgcagcccatcaaaaaccag
tgggagagggctcaagggtccagtgggccccgtaaggaggccaactcatcagccaagagt
cctcagttccttccttcttctcctgctcctcctaacgccaactcccaccaacctcacctc
accctgggacactcccacattccgagtgcggtggtcctgcccaatgccacacatgagtac
cctaatcttgacaatggagaggatacactgccacattcgtctgaaaagaagctaaagaat
tcagattctaagggaagtaggaaagaacagaagaggtctgtggatgccagaaatacccta
aatgaccttttaaaacacctcaatgactctgtggccaaccccaaggccattcttcaagag
ggatcagggccccgcccaagacagcacctcgcactggagcccatggaggaactgactgaa
gtaccccccagggtgcccagccgtgaggcttccctatactccccctcctcttccctgcca
cggcacagccccaccaagagggttgatgtgcctatgcccaccactcctactacaccaacg
ggcagcctgagcatggggggcaccctggagaggcaaagaggggggtatcaactccatcgg
agtgcctctcacaggcactccttatccacctcaccaaatgcggtaaccatgggggtttct
gtgtctcgccaacacagtatgaacagagggggttacattcccccaacacccccctccaga
cttgactcccatggtggagtgatgggggcaggaatgcactcacctcacccaccctctcta
tcccgacagagcagctacagtgggcattgctcactccctcgcacggggcttaaaaggacc
ccatcgctgaagccagatgtgccccctaaacccaacgggttttcaccacagactccacag
atgcgagtggtcaacaagtacagttattaa
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