Larimichthys crocea (large yellow croaker): 104920238
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Entry
104920238 CDS
T04659
Name
(RefSeq) fibrillin-2
KO
K23342
fibrillin 2/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104920238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104920238
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104920238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
104920238
NCBI-ProteinID:
XP_019112398
LinkDB
All DBs
Position
XVII:21000323..21062676
Genome browser
AA seq
2891 aa
AA seq
DB search
MGSGKLAQVLLGWAAVCVSVFHVACVQTGDGPYQASRFTGTVDQREVQRVRRRGQETLRG
PNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSSGQLSPSCGAGA
GVQTCNVRCMNGGSCAEDSCSCPKGYTGSHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEQCPAQPHPCRRG
FIPNIRTGACQDVDECQAVPGLCAGGNCINTVGSYECKCPAGHRQSETSHKCEDIDECST
IPGVCDGGECTNTAGSYVCTCPRGYISSTDGSKCVDQRVGTCFSALSNGRCAGELTGQYT
KMQCCCDTGRCWALGQIPEMCPVRGSDEFRRLCIVGVPQGHGLPHGYPNGHFPSTNGNGF
NYGYKFPNGNGNGGIGGNGGGSFGGNGGSFGGNGGTFGGNGGGLLNNAHIGTVSVNDSID
VCKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCINGDCVNTAGSY
HCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTEGSFQCICNAGFELTPDGKNCI
DHDECATTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECLTPGICMNGRCINS
EGSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCANPEHG
FGEPCHPCPSRNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICN
IGYESDTSGKNCVDINECLVNRMLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINEC
LSSPCINGECRNVAGSFHCDCTHGSKLDSTNTICVDSMKSTCWLTIQDNRCEVNINGATL
KSECCSTLGAAWGSPCDPCEIDTACSRGFARMKGVICEDINECEVFPGVCTNGRCMNTQG
SFRCECAEGLTLDSTGRTCVDMRSEQCYMKWHEDECGQPLPGRYRVDMCCCSVGAAWGID
CEECPKPGTPEYRTICPRGHGFANRGDILTGRPFYKDVNECKVFQGLCTHGNCRNTIGSF
KCRCNNGFALTAEERNCTDIDECRISPDLCGHGSCVNTPGSFECECFEGYESGFMMMKNC
MDIDECERNPLLCRGGTCLNTEGSYECECPTGHSLTSDGSACEDVNECQLSDNLCKHGQC
VNMPGTYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCETHCTNSEGSYECSCSEGYALMP
DLRTCADIDECEETPDICDGGQCTNIPGEYRCLCYDGFMASMDMRTCIDVNECDLNPNIC
LHGDCENTKGSFICHCQLGYFVKKGSTGCTDVDECEIGAHNCDMHAACINVPGSFKCRCR
DGWVGDGIKCVDQDECSAEEHNCNPNADCVNTPGSYRCTCKEGFNGDGFSCSDMDECADN
VNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCV
CDDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPADFELNPTGVGCVDTRI
GNCFLDSLQRGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPAPNSTEYKTLCPGG
EGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDEC
TTHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNM
TKKMCCCAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPIDIDECREIP
GICANGVCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRC
ECSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDID
ECDRHPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALQGQVCRNGRCINGLGS
FQCLCHEGFENTPDGKNCVDINECVSLPGTCSPGTCDNLDGSFRCICPPGYEVKNDQCID
INECDVEPNNCQFGTCTNTPGSFQCTCQQGYVLSDNKRRCYDTRESFCFTKFEAGKCSVP
KASNTTKAKCCCSKMPGEGWGLPCELCPRMTEAAFNTLCPFGHGVLPGPGDAREDMNECL
DNPGICQNGICINTDGSFRCECPFGYNLDYTGVKCVDTDECSIGNPCGNGTCTNVVGGFE
CSCQEGFEPGPMMTCEDINECSQNPLLCAFRCVNTFGSYECMCPAGYVLRDDQRMCRDQD
ECSEGLDDCDSKGMTCKNLIGTFMCICPLGMQRRPDGEGCMDLNECRAKPGICKNGRCVN
TVGSYRCECNDGFEPSSTGTECIDNRKGYCYTEVLQTMCQQSSTNRNSVTKSECCCNMGR
GWGSQCELCPLPGTVQYKKMCPLGPGFTTDGRDINECHVMPDLCRNGQCINSIGSFRCQC
NVGYKADFTTTSCVDMDECALSPKPCNFLCKNTEGSYLCSCPRGYSLQPDGKTCKDLDEC
STKQHNCQFLCVNTIGGFTCKCPPGFTQHQTACVDNNECSGQNSACGSRASCVNTPGSFN
CECSKGFSLDSTGIECEDVDECGSNHRCQHGCQNMLGGYRCGCPQGYVQHYQWNQCVDEN
ECQAGTVCGSASCYNTLGSFKCVCPSGFDFEQTAGGCQDVNECSTGSNPCIYGCSNTDGG
YLCGCPGGFYRAGQGHCITGSGFSGQFTEGDDEDSLSPEACYECKINGGGKPGRHRRNAD
ENEITQDSAVSMASVDTQDSIYMNLTRSSLLNKEPLLELLPALQPLENHVRYVITHGNVN
EHFRLLERRDGKSVLRLGKRLPPPGSYRLEIASLRLFGPRRLHQLEEQHDSDYLQGEIGD
ALRIKLNIHLH
NT seq
8676 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagggaagctggctcaggtgctgcttggatgggcggccgtgtgtgtttcggtg
ttccatgtggcttgtgttcaaactggggatggaccgtaccaagctagccgattcactggc
actgtggaccagagagaggtgcagcgggttcgacgccgtggccaggagacactgagaggg
cccaatgtgtgtggctctcgcttccattcatactgctgtccaggctggaagactctgcca
ggaggaaaccagtgtattgtcccaatttgcaggaattcatgtggcgatggcttctgttcc
agacccaacatgtgtacctgttcaagtggtcagctctctcccagctgtggagcaggagca
ggagttcagacctgtaacgtcaggtgtatgaatggaggcagttgcgctgaggactcctgc
tcctgccctaagggttacacaggcagccactgtggacagcctgtgtgtgagaatggctgc
cagaacggtgggcgctgcatcggacccaacagatgtgcctgtgtctacggtttcactggc
ccgcagtgcgagagagactacaggactggaccatgtttcacccaggtgaacaaccagatg
tgtcaaggccagctcagtggaattgtctgcaccaaaaccctctgctgcgctaccattggt
cgagcttggggccacccctgtgagcagtgtcctgcccagccacacccatgcagacgaggc
ttcatccccaacatccgcaccggggcctgccaagatgtggacgagtgccaggcagtgcca
ggtctttgtgctggaggtaactgcatcaacactgtgggatcctacgaatgtaaatgtccc
gctggacaccgtcagagtgaaaccagccacaaatgtgaagatattgatgaatgcagcacc
atccctggtgtgtgtgatggaggagaatgcaccaacactgcaggtagctacgtgtgcacc
tgtccacgaggttacatctcgagcacagatggctccaaatgtgttgatcagcgtgttggc
acctgtttctctgctctgtctaacggccgctgtgctggcgagctgactggtcagtacacc
aagatgcaatgttgctgcgacacaggacgctgctgggctttgggacagattcctgagatg
tgccctgtcaggggatcggacgagttcaggcgtctgtgtattgtgggtgttccccaagga
cacggcctccctcatggctaccccaacggacacttccccagcaccaacggcaacggtttc
aactatggttacaagttccctaatggtaacggtaatggaggcattggtggcaacggagga
ggaagctttggagggaacggtgggagctttggaggtaatggaggaacctttgggggcaat
ggaggaggacttctgaacaatgcacatattggcacggtttctgtcaacgactccattgat
gtgtgcaaacatttcaccaacctctgtctgaatggacgctgcattcctacacccacaagc
taccgctgcgagtgcaacatgggctatagacaggatgttcgcggggagtgtatcgatgtg
gatgagtgtgtgagtaacccatgtataaatggagactgtgtcaacacggctggatcatac
cactgcaagtgccatgaaggctaccaaggaacccctaccaaacaagcctgcattgatatt
gatgagtgtattgtgaatggagtgatgtgtcgcaacggccgctgtgtaaacacagaggga
agctttcagtgtatctgcaacgctggctttgagcttactcctgatggaaagaactgcatt
gatcatgacgagtgtgccaccaccaacatgtgtctcaatggcatgtgtatcaatgaggat
ggcagctttaagtgtatctgcaagcccggcttcgctttagcgcctaacggacgctactgc
accgacatcgatgagtgtctgacacctggcatctgtatgaacggccgttgcatcaactct
gagggctccttccgctgtgagtgccccccgggccttgctatcgatgtagacgggagagtg
tgcgtggacacacacatgaggaccacctgctacggcgccataaagatgggcacatgctcg
cggccgttccccggtgcagtgaccaaatctgagtgctgctgtgccaatcctgaacacggt
tttggagagccttgccatccttgcccctccagaaactcagcggagttccaggctgtatgc
agtagtggtattggcattacagctgatggcagagacatcaatgagtgtgccctggacccg
gacatttgccagaacggcatgtgtgaaaacctgagaggaagctaccgctgcatctgtaac
atcggttatgagtctgacacaagtggaaaaaactgtgttgacatcaatgagtgtctggtg
aaccgtatgctttgtgacaacggtctgtgcagaaacactcctggctcttacacctgctcc
tgtcctaaaggatttgtcttcaaacccgactctgagacatgcgaagatatcaatgaatgt
ctctctagcccatgcatcaatggagagtgtcgcaacgtggctgggtccttccactgcgat
tgcacacacggcagcaagctggactccaccaacaccatctgcgtggatagcatgaagagt
acgtgctggctgactatacaagacaaccgctgcgaggtcaacatcaacggagccacactg
aagtcagagtgctgctccacactgggagctgcctggggcagtccttgtgatccctgcgag
atcgataccgcctgctcccggggttttgctcgtatgaagggcgtaatctgtgaagacatt
aatgagtgtgaggtgttccctggagtgtgtacaaacggccggtgtatgaacacccagggc
tcgttccgctgtgagtgtgccgagggtctcaccttggacagtactggacgcacatgtgtg
gatatgcgcagtgagcagtgctacatgaagtggcatgaggatgagtgcggccagccgctg
ccaggaagataccgtgtggacatgtgctgttgttcagtgggtgctgcctggggtatcgac
tgcgaggagtgtcccaaaccaggcacacccgagtacaggaccatctgtcccagagggcac
ggcttcgccaacagaggagacattctgacaggcaggccgttctacaaagatgtcaatgaa
tgtaaggtgttccagggtctgtgtactcatggaaattgcagaaacaccatcggcagtttc
aagtgtcgctgcaacaacggctttgctctgactgcagaagagagaaattgcacagatatt
gatgagtgccgaatctccccggacttgtgcggtcatggttcctgtgtgaacacacctggc
agctttgagtgtgaatgtttcgagggctacgagagcggcttcatgatgatgaagaactgc
atggacattgacgagtgtgagagaaaccccctgttgtgtcgtggaggaacctgcctgaac
acagaagggagttatgagtgtgaatgccccacgggacactcgctcacctccgatggatct
gcctgtgaagatgtgaatgagtgccagctgagtgacaacttgtgcaagcatggccagtgt
gtcaacatgcctggaacctaccagtgctcctgtgacaccggctaccaggtcacaccagac
cgtcagggctgcgtggatattgatgaatgtaccattatgaacggaggctgtgaaacccac
tgtaccaactcagagggaagctatgagtgcagctgtagtgagggatacgctcttatgccc
gacctcaggacctgtgcagatattgatgagtgtgaagagactccagacatctgtgacgga
ggccagtgtaccaacattcccggggaataccgctgcctgtgttacgatggcttcatggct
tctatggacatgaggacatgtattgatgtgaacgagtgtgacttgaacccgaacatctgt
ctccacggtgactgcgagaacaccaaaggctccttcatctgccactgtcagctgggatac
tttgtcaagaaaggatccacgggctgcacagatgttgatgagtgtgagattggggctcat
aactgtgacatgcatgctgcctgcatcaacgtgcctggaagctttaaatgtcgctgtcga
gacggctgggtgggagacggcatcaagtgtgtggatcaggatgagtgctctgcagaggaa
cacaactgcaaccccaatgcagactgcgtcaacacaccagggtcctacaggtgtacgtgc
aaggagggtttcaatggagatggattttcctgctctgacatggatgagtgtgcagacaac
gtgaacctatgtgagaacggccagtgtctgaatgctccaggtggttaccgctgcgaatgt
gagatgggcttcactccaacagaagacagcaaggcctgtcaagacattgatgaatgtaat
ttccagaacatctgtgtgtttggaacatgccagaatcttcctgggatgttccgttgtgtg
tgtgatgatggttacgaactggaccgcagtggaggaaactgcactgacatcaacgaatgt
gctgaccctgtgaactgcatcaacggactgtgtgtgaacactcctgggagctacttgtgt
aactgcccggctgactttgagctcaaccccactggagtgggctgcgtggatactcgtatt
ggcaactgcttcctggatagcttgcaacgtggtgatggtggaatctcctgcagtgcagag
atcggagtcggagtgacccgagcttcctgttgctgctctctgggaggagcatggggaaac
ccctgtgaactgtgccctgcccccaactccacggaatataagactctttgtccaggagga
gagggattcagacccaaccccatcaccgttatcctggaagatattgatgagtgccaggag
ctgccaggtctctgccagggtggaaactgtgttaacacctttggtagtttccagtgtgag
tgtccagcaggctactatctcaatgaggagactcgcatctgtgaggatattgatgagtgc
acaacccatattgggatctgtggacctggtacctgctacaacactctgggcaactacacc
tgtgtgtgtcccccagaatacatgcaggtcaatggaggaaacaactgcatggacatgagg
aagagtgtgtgttaccgtaactttaacgacacgtgtgagaacgagctgtccttcaacatg
accaaaaagatgtgctgctgtgcatacaatgtggggaaagcctggaataagccatgcgaa
gcctgtccaactcctgctacctctgagtatcagttactgtgtggtaatcaggctcctggc
ttcatcattgacatccacaccggcaagccaattgatattgatgagtgcagggagatccct
ggtatctgtgccaatggagtgtgtatcaaccagattgggagcttccgctgtgaatgtccg
atgggtttcagctacaacaacatactgctcatttgtgaagatattgatgagtgcaacagt
ggggacaacctgtgccaacgcaacgccaactgtatcaacattccaggcagctaccgctgc
gagtgctcgccaggcttcaaactgtcccctagcggggcctgtgtggaccgtaatgagtgc
caggagattcctaatgtttgcagccatggggagtgcatcgatacacagggaagctatcgc
tgtctctgccacaatggcttcaaggctactgctgatcagaccatgtgcatggatattgat
gagtgtgacagacatccatgcggtaacggtacctgcaaaaacacagtgggatcctacaac
tgcctctgcttccccggtttcgagctgacacacaacaacgactgcatggacatagatgag
tgcagtgccctccagggccaagtgtgcaggaatggacggtgtatcaatggacttggctct
ttccagtgtctttgccatgaaggttttgagaatactccagatgggaagaactgtgtcgat
atcaatgagtgtgtgagcctacccggcacctgctctccaggaacttgcgataatctggat
ggatctttcagatgtatctgccctcctggctatgaggtgaaaaatgaccagtgtatagat
atcaatgaatgtgatgtggagcccaacaactgtcagtttggcacctgcaccaacaccccc
ggcagcttccagtgtacctgccagcagggctacgttctctctgacaacaaacggcgctgc
tatgataccagagagagcttctgtttcaccaaattcgaggcaggtaaatgctccgtcccc
aaagcttcgaacaccaccaaggccaagtgctgctgcagcaagatgcctggcgagggctgg
ggacttccctgtgagctgtgcccacgaatgaccgaagctgctttcaacactctgtgtccc
ttcggtcacggagtcctgcctggaccaggcgacgctcgtgaagatatgaacgagtgtctg
gataacccaggaatctgccagaatggtatctgcatcaacacagatggttcgttccgctgt
gaatgtcccttcggatacaacctggattacactggagtcaaatgtgttgacactgatgag
tgctccataggaaacccatgtggaaatggaacctgcaccaatgtggtgggaggtttcgag
tgttcctgccaggagggtttcgaacccggacccatgatgacctgtgaagacatcaatgaa
tgttcccagaatcctctgctgtgtgccttccggtgtgtaaacacctttggttcctatgag
tgtatgtgtcctgctggctacgtgctgagagatgatcaacgcatgtgcagagaccaggac
gagtgttctgagggtctggacgactgtgactccaagggtatgacctgtaagaatctgatt
ggtaccttcatgtgcatctgccctcttggcatgcaacgcagaccagatggagagggatgt
atggacctgaacgagtgccgtgccaaacctggcatctgtaagaacgggcgttgtgtcaac
acagtgggaagctaccgctgtgagtgcaacgatggttttgagccgagctccactggaacc
gaatgtattgacaaccgaaagggctactgttacacagaggttctgcaaacaatgtgccag
cagtcatccaccaacaggaacagcgtgaccaagtctgagtgctgctgtaacatgggccga
ggctggggttcacagtgtgagctctgcccattgcccggcaccgtacaatacaagaagatg
tgcccacttggacctggcttcaccacagatggtagagatatcaacgagtgccatgtgatg
ccagatctgtgccgaaacggtcaatgcatcaacagtatcggatccttccgctgtcaatgt
aacgtgggctacaaagctgacttcactacaacctcctgtgttgatatggatgagtgcgcc
ctgtctccgaagccttgtaacttcctgtgtaaaaacacagaaggcagttacctctgctcc
tgccccagaggctacagcctacagccggatggaaagacttgcaaagatcttgatgaatgt
tcgacaaagcagcataactgccagttcttgtgcgtcaacaccattggaggtttcacctgc
aagtgtccccctggtttcacacagcaccagactgcctgcgtcgacaacaacgagtgttcc
ggtcagaacagtgcatgtggttcccgtgcctcttgtgtcaacacgcctggtagcttcaac
tgtgaatgctctaaaggtttctccttggacagcacaggcatagagtgtgaagatgtggat
gaatgtggcagtaatcaccgctgtcagcacggctgtcagaacatgctaggaggttaccgc
tgtggctgtccacagggctacgttcagcactaccagtggaaccagtgtgtggatgaaaac
gagtgtcaggcaggaactgtctgtggctctgcctcctgctacaacacactgggaagcttc
aagtgtgtgtgcccctctggctttgactttgagcagaccgctggtggctgccaagatgtg
aatgaatgtagcacaggcagcaacccttgtatctacggctgctccaacaccgatggaggc
tacctgtgtggctgtcctggaggtttctacagagctggacaaggtcactgtataacaggc
tcgggtttctcaggccagtttacggagggtgacgacgaagacagtctgtctcctgaagcc
tgctacgagtgtaagatcaacggaggaggaaagcctggacgacacagacgcaatgctgat
gaaaatgagatcacccaggattcagcagtgagtatggccagcgtggacacccaggattcc
atctacatgaatcttactcggtcctcgctgctcaacaaggagcctttgctagagcttctg
cctgccctgcagcccctggagaatcacgtacgctatgtcatcacccatggcaacgttaat
gaacacttccgcctgctggaacgccgcgatggaaagagcgtgctccggcttggcaagagg
ctccctccaccgggatcctaccggctagagatcgccagcctgcggctgtttgggccccga
agactgcaccaacttgaggagcagcacgacagtgactacctacaaggggaaataggagac
gcccttcgcatcaagctcaacatccacctgcactga
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integrated database retrieval system
