Larimichthys crocea (large yellow croaker): 104920270
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Entry
104920270 CDS
T04659
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104920270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104920270
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104920270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
API5
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
104920270
NCBI-ProteinID:
XP_010730780
LinkDB
All DBs
Position
III:complement(30324629..30350107)
Genome browser
AA seq
2546 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPVLLQTMLARNPGIFREKNVMQQAMVPP
YKITQNSMHSPAQSANFQPAAISPNPPSRFVSPQTGSSSRYMGQQNSPVPSPYTPQSPAT
GYIQPYPHQQPPSYNQHQQIQQVSVTSPMVPGGIRNIHEGKVSGQMGNAANHHSDRHGTE
DYLNIVHRLSNEDGDSAMRNPSFPLRSPQSGCSPAGSEGTPKPGSRPPLILQSPPPYAPS
PREGGPDQKQQLQQRKKTPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDTPGEVV
QGMDQNSDNMEAELGFQQVPVLQQNLGARLISQQAGGASGLQPPSSPYDEAELDALAEIE
RIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLT
PQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGQAAVE
GSDTALRLKPDGRPEVIKNRVDKHDSRREGRESSKHRHDDKSSDRRGDMPKSSNRGEHGR
DRDRESDRDRRHRSETGGRDRRSPDSRCRSDRDRSGYRASSTGEPGRSSNRQDGSKPASS
ASGAKLPDSFPAHLLGGHSGALKNFQIPKIKRDKDGSGSTESQVWGQPKVKLERLGLVKD
FEKRPKPVVLLKKLSVDQIQRIIRHSKSGKNRISSGKSGKSGMDPAVLKELPPELLAEIE
STMPLCERVKMNKRKRSTVNEKPKYAEVSSDEDFDANGESARKRQRRDKDRAWDFEERER
RGSGEHRKSGNRDSRRGSGSRYRDSSEEDSPPPSMSEVARKMKMKEKQKKRKAYEPKLTQ
EELMDSSTFKRFLASIDNILENLEDVDFTTMADDDEIPQELLLGKHQLNELGSESAKIKA
MGISSRIPSDKLVKLLNILEKNIQDGAKLSTLMNHDHDAEDEEKLWRDLIMERVTKSADA
CLTALNIMTSTHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKA
KRAKCSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSEL
QLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYIQMV
TALVLQLIQCVVHLPNDKDTFEECDKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQG
EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLG
TVAARLRKDAVTSKMDQRSIDRILQQSPGTDETQQLQKALLDYLEDNAETDASLVFARKF
YVAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEIETTGEIMQRAEKRKKFLRTIIKT
TPAHFATLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAM
KCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDML
IERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVNETFQKL
WFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQ
LVDNLVEHILKYEESLAENKGVNSQRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKC
NTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAV
VNKVTHNYKFVWACFNRFYNALNKLKIQHHEDPNSTTLVANKPFLLRSLFTVGALARHFD
FDLEEFKGTNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKSL
YNGILADSASSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMS
SSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMR
NKADQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQSIEGPSQSRRTIIRGFRQDETHSALC
SHLFTMIRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQSQEEPLFIMHH
IDITLSVSGSNLLQTFKELLLKEPRRKEKKVKKEWKNTSDGEDEEEKMNCDSPRSNDENS
NSDDDNDDEVVRRPKKARKPVADSSESESDLEDLDLEDAEKVMRLLPDNPMGLLDFANAV
QGILLLLVLKQHLKNQYGFSDSKIQKYSPTESAKVYDKAVNRKNNVHFHPRQTIDFISNN
MAHATLTNDIKRRIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPL
SGPSPRNQAGPETDDDDSDCDERTPGSSRRSRRAGDSSDPGRMSEVVEAMDVIALCCPKY
KDRPQIARVIQKTSNGYSIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKKIAL
TSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctacccctcccttcccctctcccggccaccaccactaagagcctc
ctatataatgggaggatcgcggaggaagttacctgcctactgggctgtcgggacgagaat
ttggcctcccagctagcccatggcctcaaccaggtctccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgctccagtgctactgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgtcatgcagcaggcaatggtaccgccg
tacaagatcacccaaaattccatgcatagccctgcccagtcggcaaatttccagccggcg
gcaatttctcccaatccaccaagccggtttgtgtcgccccagactggttccagtagtcgg
tatatgggccagcagaacagtccagtaccgagcccttacactccgcagagccctgccact
ggttacatacagccgtatccccaccaacaaccacccagctataaccaacaccaacagata
caacaagtgtctgtgaccagtccgatggttcctggtgggattcgaaatatccatgagggc
aaagtatcggggcagatgggtaatgctgccaaccaccactcagacagacacggcactgag
gactacctgaatattgtacaccgactgagcaatgaggatggtgactccgccatgaggaat
ccttctttccctctgagatctccacagtccggctgctctccagcagggagtgaaggaacg
cccaaaccgggctctcgtcccccgctgattctgcagtcaccacctccctatgcaccctca
ccgagggaaggaggacctgaccagaaacagcagctacagcaaaggaagaaaaccccggcg
gtaaaagaggagaaagatatgtacgacattgtaagctctccaaacaaggactctacgaaa
ctcaccctcaagctgtcgagggtcaagtcaaatgagtccgataccccaggtgaggttgtg
caaggcatggaccagaactctgacaacatggaggcagaactgggctttcagcaggtgcct
gttctccagcaaaatctaggagcccggctgatctcccagcaagccggtggtgccagtggt
ttgcagcctcccagttcgccttacgatgaggcagagctggatgctcttgctgaaattgaa
aggatagaacgagaggcagctagcgagaagtgctccaaggaggtgcaagataaagataag
cctctgaagaagagaaaacaggactcttttcccctggagccaggcgcagggggaccaggt
ggcccgacaggtgccccaggcagtggatcaacaggagggggcaatgctggcaaactgacc
ccgcaagaggccaccgcagctgggaacggtgccagccgccctcccctcatggtgagcatc
gacctccagcaggctggccgagctgatggccagctcgacccctgtctggctgcccctatt
ccagcccttgaggcccaacgctggcctgaagaaccagctagtgggcaagctgcagtggag
ggttctgacacggctttgcggttgaaacctgatggtcgaccggaagtcatcaagaacagg
gtcgataagcatgacagcaggagagagggtcgggagtcgtcaaagcaccgacacgatgac
aagtcctcggacagacggggagacatgccaaagtcatcaaaccgaggggaacatggacga
gacagggacagagagtctgacagagataggaggcatcggagcgagactggtggtcgagac
cgacgttcccctgactctcgctgccgaagtgaccgagataggtctggctaccgggcttct
tccactggagagcctggccggagcagcaataggcaagatggttccaaaccggcctcatct
gcttctggtgctaaacttccagattctttccctgctcatctcctgggaggccatagtggc
gcactgaagaacttccagatccctaagatcaaacgcgataaggatggcagcgggtcaact
gaaagtcaagtgtggggccaaccgaaggttaaactggagaggctgggtttggtgaaggac
tttgagaagaggcctaaacctgtagtgcttctgaaaaagctctctgttgaccagatccag
aggatcatccggcacagcaagtctggaaaaaacaggatctcctcaggaaagtctggcaaa
agcggtatggacccggcagttttgaaggagctgcctccagagctgctggcagagattgag
tcaaccatgcccctgtgtgaaagggtaaagatgaacaagaggaaacgaagcactgtaaat
gagaagcccaaatatgctgaagtcagctcggatgaagactttgatgcaaatggagagtct
gcaaggaaacgtcagcgtcgagacaaagacagggcctgggactttgaagaaagggagcgc
cgtggctcaggagaacatcggaaaagcgggaaccgggacagccgacgaggctcagggagc
cgctacagagactcctccgaggaagattcaccgccacccagcatgagtgaagttgccaga
aaaatgaagatgaaggaaaagcagaagaaacggaaagcatatgaacccaagctgacccaa
gaggagctgatggactcttccacgttcaagaggttcttggcgagcatcgacaacatactg
gagaatctggaggatgtggatttcactaccatggcggatgatgatgagatacctcaggaa
ttgttgcttggtaaacaccagttgaacgagctgggcagcgagtccgccaagattaaggcc
atgggcatctccagcaggatcccatcagacaagctggtgaagctgctgaacatactggaa
aagaatatccaagatggagccaagctctccaccctgatgaaccatgaccacgatgctgaa
gatgaggagaaactctggagagatctgataatggagcgagtcacaaagtcagcagacgcc
tgtctgacagctcttaacatcatgacctcgacgcacatgccgaaggctgtctatatagaa
gacgtcatagagcgggtgctacaatataccaagtttcatcttcagaacacactgtatcca
cagtacgacccagtctacagggtggacccacatggaggtggcctgttgagctcaaaagca
aagcgcgcaaaatgttccacacacaagcaacgcgtgatcatcatgttgtacaacaaagtg
tgcgacattgtcagcaacatctccgagctcctagagattcaactactcacagacaccacc
atcctccaggtttcctccatgggaatcaccccattctttgtggagaatgtcagtgagctg
cagctgtgtgccattaaactagttacagcagtgttctcacgttatgagaagcatcggcag
ctgatcttggaggagatctttacatctttggccagactgcccaccagcaaacgctccctc
aggaatttcaggctgaacagctcagacaaggatggagagccgatgtacatccaaatggtg
acggctctggtgctgcagctgatccagtgcgtggtccatctccccaatgacaaggacact
ttcgaggagtgcgacaaggtggatcaagatgtgttgataaccaactcatatgagacggca
atgagaacagcacaaaacttcctctcagtcttcctcaaaaaatgtggcagtaagcaggga
gaagaagattaccggccattgtttgagaactttgtccaggacctgctttcaacagtcaac
aaaccagagtggccagctgcagagcttctgctcagtctgcttggtagactactggtacac
cagttcagtaataagcagacagagatggcactgagagttgcatctctagactacctgggc
acagtggctgcccgtctgaggaaggacgcagtcaccagcaagatggaccagagatccatt
gatcgtatcctacaacagtctccaggtactgatgagacccagcagctgcagaaggctcta
ctggactacttggaagataatgctgaaacagatgcctcactggtgtttgctagaaagttc
tacgttgctcagtggttccgggacgccaccacagaggccgagaagtccatgcggaaccag
aatccgaaagatgaggactcatcggacggaccgcaacacgccaaggagatcgagaccacc
ggcgagattatgcagcgtgccgagaaacgcaagaagttcctgcgcaccatcatcaagacc
acgccggctcattttgccacactgaaaatgaactctgacactgtggactatgaggactcc
tgtctgatcgtgcgttatttggcctccatgaggccgttcgcccagagctttgatatttat
ttaacacagatcttgcgagtccttggggaaagcgccatcgctgtaaggactaaagccatg
aaatgtttgtctgaggttgtggctgtggaccccagcatactggcaaggtctgacatgcag
cgtggcgtccatggtcggttgatggacaactccaccagtgtgagagaggcggctgtagag
ctgctgggcagatttgtgctcagcagacctcagctcactgagcagtactatgacatgctc
atagagaggatactggacactggtatcagcgtaagaaaacgggtgatcaagatcctcaga
gacatctgtctggagcagccaaccttcagtaagattactgagatgtgcgtgaggatgatc
cgcagggtcaatgatgaggaaggtatcaagaaattggtgaatgagacattccagaagtta
tggtttactccaactccagcccacgacaaagagaccatgaccagaaaaatcctcaacatc
actgatgtggttgcagcgtgtcgagacaccggctatgactggtttgagcaacttcttcag
aatcttctcaagtctgaagaggatgcatcgtataagccagccaaaaaggcctgtgttcag
ctagttgacaatctggtcgagcacatcctcaaatacgaggagtctcttgcagagaacaaa
ggtgtgaactcccagcggctagtggcatgcatcaccaccttgtacttgttcagcaagatc
agggcccaactaatggtcaaacatgccatgaccatgcaaccctacctgaccacaaagtgt
aacactgccaatgatttcatggtcatctgcaatgtggcaaagatcttggagctcgtggta
cctctgatggagcaccccagtgaaacgttcctcgccaccatcgaagaagacctcatgaag
ctcatcatcaaatatggcatgactgtggtccagcactgtgtgagctgtcttggagctgtt
gtgaacaaagtcacgcacaactacaagtttgtctgggcttgcttcaacagattctataat
gcacttaacaagctgaagattcagcatcacgaggatcctaacagcacgacgttggtagca
aacaagcctttcctgctgcgatcgctcttcactgtgggagccctggcccgacattttgat
tttgatctggaggagttcaagggcaccaacaaggttgttatcaaggagaaagttctcgag
ctgctgctatacttcaccaaacacgaggacgaagaagtcaagaccaaagccatcattggc
ttaggcttccttgtgatcatgcatccgagccagatgtttatgccggaggtgaagtccttg
tacaacggcatcctggctgacagcgcctcttccatcaacctcaaaatccagatcctcaaa
aacctccagacgtaccttcaggaggaggacacgcggatgcaggaagcagacagagaatgg
aagaaactgtccaaacaggaggatctgaaggagatgggagacatctcttcagggatgagc
agctccatcatgcagctttacctaaagcaggtgttggaggcattctttcacacccagtcc
agtgtacggcactttgctctcaacgtcatagctctgacactcaaccagggtctcatccat
cctgtacagtgtgtaccctacctcattgcaatgggaacagacccagagcccagcatgagg
aacaaagctgaccagcagctggtggagattgacaagaagtacacaggattcatccatatg
aaggccgtcgctgggatgaagatgtcgtacaatttgcagcagtccatcgaaggtccatcg
caatctcgtaggaccatcataagaggtttcagacaggacgagacccactcagcactctgt
tcccacctcttcactatgatccgggggaaccggcaacaccggagggctttcctcatctcg
ctgttgaacctcttcgatgacagttctaagacggaagtaaacatgctgctgttcatcgct
gacaaccttgcctgtttcccataccagagccaggaggagcctctcttcatcatgcaccac
atagacatcaccttgtctgtttctggcagcaacttgttgcaaaccttcaaagagcttctg
ctaaaggagccgaggcgtaaggagaagaaggtaaagaaggagtggaagaacacgtcagat
ggggaggatgaagaggaaaagatgaactgcgactctccgaggagcaacgacgaaaacagc
aacagtgacgacgacaatgatgacgaagtggtacggcggcctaaaaaggccagaaaacct
gttgcagacagctccgagtcagagtctgatctggaagacttggatttggaggatgcggaa
aaagtaatgaggctccttccagacaatcccatgggtctcttggactttgctaatgctgtt
cagggcatcctgttgcttctggtgctcaaacagcatctgaagaaccagtatggattctct
gacagcaaaattcagaagtactctccaacggagtcagccaaggtgtacgacaaggcggtg
aacagaaaaaacaacgttcacttccacccacgacaaaccatcgacttcatctccaacaac
atggctcacgccacactgacgaacgatatcaagaggcgaatagtcagacagtacctagat
ttcaaggttctgatggaacatctggatccagacgaggaggatgaggagggagaagcgtct
gccagtgctaacatcagaaacaaagccataaacgccctactgggaggctccggccccttg
tcaggacccagtccgcgcaatcaggcaggaccagagacggatgatgatgacagtgattgc
gacgaaaggaccccagggtcctcgcgaaggtcaaggcgagcaggtgactcctcggacccc
ggccgtatgagtgaggtagtggaggctatggatgttatcgccctgtgctgccccaaatac
aaggaccggccgcaaatagctcgagtcatccagaagacctccaacggatacagcatccac
tggatggccggctcctactcggggccctgggcagaggccaagaaacgcgatggccgcaaa
ctggtgccttgggtggacactattaaggagtcggacatcatttacaagaagattgccttg
accagcaaccacaaactgagcaacaaagtagtacagactttacgctcactgtatgcagcg
cgggaaggaggggctagctaa
DBGET
integrated database retrieval system
