Larimichthys crocea (large yellow croaker): 104920284
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Entry
104920284 CDS
T04659
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
lco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104920284 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
104920284 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104920284 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104920284 (gtf2h3)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104920284 (gtf2h3)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104920284 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
PUB62-63_C
Motif
Other DBs
NCBI-GeneID:
104920284
NCBI-ProteinID:
XP_010730807
LinkDB
All DBs
Position
III:complement(29425228..29429262)
Genome browser
AA seq
300 aa
AA seq
DB search
MAAEDEISLLVIVVDVNPIWWGQQAQREPEFTLSKCLDAVMVLGNSHTAMTRTNKLAVIA
SHCQDSHFLYPSKNWRGGDNVGDDACSSGDGKYELLSVANNLIAEEIRNVMSKTEVRGNS
TDTLLAGSLAKALCYINRVSKELEVGQDLKSRILVIKAAEDCALQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPHKLALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQAT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaggatgaaatcagcctgctggtcatcgtcgtggatgtaaatccgatatgg
tgggggcagcaagctcaacgtgagccagagttcaccctgtccaagtgtctggatgcggtc
atggtgttagggaactcccacacggccatgaccaggaccaacaagctggctgtcatcgct
agccactgtcaagacagtcacttcctgtatcccagtaagaactggagaggcggggacaac
gttggagatgatgcatgttctagcggggatggaaaatatgaactcctgtcggtcgctaat
aatctcattgctgaagagatcaggaatgtcatgtcaaaaactgaagtgcggggaaattca
actgataccttgttggctggatctcttgccaaagctctctgctatattaacagggtctct
aaagagctggaagttggacaggatttaaaatcaagaatactggtgataaaagcagccgag
gactgtgccctccagtacatgaacttcatgaatgtcattttcgctgcccagaaacagaac
atcctgatagatgcctgtgtgttggactcagactcaggtctccttcagcaggcttgcgat
ataactggaggactgtacctcaagataccacataaacttgccctggcacaataccttctg
tgggtgttcctgcctgactctgagcaacgttcacagctggtgctgccaccgcctgcacat
gtagactacagagctgcatgcttctgccatcgtaacctcattgagattggttacgtgtgc
tcagtttgtctgtcaatattctgcaacttcagccccatctgtacaacatgcgagactgcc
ttcaaaatccaactaccacagatggtcaagcccaaaaagaagaaactcaagcaagctaca
tga
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