KEGG   Larimichthys crocea (large yellow croaker): 104920353
Entry
104920353         CDS       T04659                                 
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lco04121]
    104920353
   03400 DNA repair and recombination proteins [BR:lco03400]
    104920353
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    104920353
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104920353
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4 UBA_7 Methyltransf_32
Other DBs
NCBI-GeneID: 104920353
NCBI-ProteinID: XP_019113065
LinkDB
Position
III:29443864..29457559
AA seq 1192 aa
MMTSVVSNQARGTRDRTLPTTTQTTQPQKQIQATAEQIRLAQMIYDKNDADFEDKVKQLI
EVTGKTQDECMVALHDCNEDVNRAINFLLESTSDTNSWETVGKKRSLGKEGGPSEIKESR
EKRGGERETSRGRGGSNRRGRGISRGREGRIEENGFEVAPGERGGDRGRRGRGRGAGGRG
RGRAAAGNRFSSQGMGTFNPADYTANSGARQETWEGDGNEPAEGTGTWGGNLEDWTSEDW
NEDLSETKVFTASSAPANHVTPGHNVDLTGLLPKAGVGVPGSVDSDLGAIVDGPSAEDLG
QSLVFTNSHHNGRTATHSYAHATANSYAHAASAGTTYAHAALSSVLGSGFGSLNAPKHSP
ASDMRTPDQLNGPRLGQRASQTLATTSNSAVSKDAGPPPMQNPVPACSPSVEAKAQRVDN
GPVTAQHLEMKLQPEPSAVLSQLAQRQQSSILSTTEPLGMSQLHAPQVPTPPGHESSMAP
VRDGASPGMKLSGMEPPITEPPQRQLKTQRRRVPPPTKIPSSAVEMPGSADISGLNVQFG
ALDFGSEAASGSVDMAQAESVREQAPAQASAPAAMPVPTAVPTQQPQSSLFSKPGSMSEH
MSSLPPLPSAVSDPSFPSPSLGLPSATPSPSLGLPSAATPPSSTAPTAASRVDNSGPRSL
PPHLGFSQSKDVPSAAALTNGYSGMKTQSTQDTTSSTSRTVKTDSPIMTSDSGPSHHIPS
PAVTPSHSTPIPSLSSHVTNTHSSGSALTTSSSLTISNEESSGSGNLHAFSTSSSSQAVN
PSPSVPQAVSSSTTNGLHPSGAPGLTPNGTNTTLSAAGGRPAPLLTNTSGKAPPNLAQGV
PPLLANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPMDYYGVTFPGTTATMPGRDGLANN
PYSGEATKFGRNDSSSPAPPTSLSTAGVQSQPQQAPQAGTQGQGQGQSQGQQTQNQAFLN
PPLPPGYGYTGLPYYAGVPGVPSAFQYGPTVFVPPASAKQPAMGLANPSNQYHQQHQPSY
GQHAYGTAFDDLSQAHGEYNKGGYGGSAQSQAKSAGSGPGKDDSTVKSVLEKAPGLSGSG
TSGGVPDMGGSIYSKTQSFDKQGFHTGTPPPFSLPSALGGTGPLNPGGAPGYAPAPFLHI
LPPHQQPHSQLLHHHLTQDGQGGPGQRSQSSSMQQKTQGSKSSYGSSPYWAN
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatcaagcccgggggactcgggacagaacgctgcccacc
accacacaaacaacacagccacagaaacagatacaggccacagcagaacagattcgttta
gcccaaatgatctacgacaaaaatgatgctgactttgaagacaaagtcaaacagctgatt
gaggtaactggcaagactcaagatgagtgcatggtagccctgcatgactgcaacgaagat
gtaaacagagccatcaatttcctgctggagagcacctctgacacaaactcctgggagact
gtggggaagaagcggagccttggcaaagaagggggaccctcagagataaaagagagcaga
gagaagagaggaggagagagggagaccagtcgtggacgcgggggctccaacaggaggggc
agaggcatcagccgagggcgtgaaggtcggatagaggagaatgggtttgaggtggctcct
ggagagagagggggagaccgtggacgtagggggcgaggcagaggggcagggggtcgcggt
agaggaagagcagctgctggtaacaggttctcctcccagggaatgggcaccttcaatcct
gctgactacacggctaattctggagcccgccaggagacctgggaaggggatggcaacgaa
cctgctgagggaactggaacatggggaggcaatctggaagactggacttcagaagactgg
aatgaggatttgtctgagaccaaagtattcactgcctcttctgctccagcaaaccacgtt
acacctggacacaatgtggacttgactggcttactgcctaaggctggagtgggtgtaccg
ggttctgtggactctgacttgggggcgatagttgatggcccctcagctgaggatttaggc
caaagcctggtgtttaccaattcccaccacaatggacgcactgcaacacacagctacgca
cacgccacagccaacagctatgcccatgccgcctctgctggtaccacctacgcgcatgct
gcactgtcctcagttctgggttctggttttgggtccttgaatgcacctaagcattcgcct
gcctctgacatgaggacaccagatcagctcaatgggcctcggcttggtcagagagccagt
cagacgttggctaccaccagcaacagtgctgtttccaaagatgcagggccaccaccaatg
cagaaccctgttcctgcctgctctccctctgttgaagccaaggctcagagagttgacaat
ggccctgttactgcccaacacttggagatgaagcttcagcctgagccatcagcggtgctc
agccagctggcccagaggcaacagtcctccatcctttccaccacagagcctctgggcatg
tctcagttgcatgctccacaggtccccacaccgccaggtcatgagtcctccatggctcct
gtaagagatggagcttctccgggaatgaagctgtcaggcatggagcctcccatcacagaa
ccccctcagcggcagctaaagacacagagacgcagagtacctcctcccacaaagataccg
tcgtcagcagtggagatgccgggctcagcagatatatctggcctcaatgttcagtttgga
gctcttgactttgggtctgaggctgctagtggatcggtagacatggcgcaggcggagtcg
gtcagggagcaagccccggctcaggcttcagctcctgcagccatgcctgtccctacagct
gttcccacacagcagccacagagcagtctgttctccaagccaggatctatgagtgaacac
atgagcagcttaccccctctaccttcagccgtatcggatcccagcttcccttcaccatcc
ctgggcttgcccagtgccacaccttctccctcccttggtcttcccagtgcagccactcca
ccctcttctacagcccctacagcagccagtcgtgtggataacagtggcccaaggtccctg
ccacctcacctgggcttctctcagagcaaagatgtcccctcagctgctgctctcacgaat
ggctacagtggcatgaagacgcagagtacacaggacactacgtcatctacgtcaagaact
gtcaaaacagactcccccatcatgacgagtgacagtggccccagccaccacatcccctcc
cctgcagttacaccttcccattcaacacccatcccctcgctcagcagtcacgtgaccaat
actcactcatctggatcagccctcaccacaagctcctcgttaactataagtaatgaggag
agcagcggtagtggcaacctccacgccttttcaacatcgtcaagcagccaagctgtcaat
cccagtccttcagttccccaggctgtcagcagctcaaccaccaatggcctgcacccatct
ggagcaccaggactaacccctaatggcacaaacacaacactctcagctgcaggcggccgc
ccagctcccctgctcaccaacacttccggtaaagctcctcccaacttggcccaaggagtg
ccgcctctcctggccaaccagtacatcatgggccctggtggcttgctccctgcttatccg
cagatctatgggtacgaggacttgcaaatgctgcagtctcgccttcctatggactattat
ggtgtaacattccctggtactacggctactatgcccggaagagatggcctagccaataat
ccatactctggtgaggcgacaaagtttggcaggaatgactcttcatctccagctccccca
accagcctgtctacagccggggttcagtcgcagccccagcaggctccacaggcaggaaca
caggggcagggccagggacagagccagggtcagcaaacacagaaccaggccttcctcaac
ccacctctgccccctggctacggatacactggtctgccgtactacgctggtgtgccaggg
gttccttcagccttccagtacggacccaccgtctttgtgcctcctgcttcggccaaacaa
cctgcaatgggcctggcaaacccttccaatcagtaccaccaacagcatcagcccagttac
ggacagcatgcgtatggcacagcctttgatgacctgtctcaagcccacggggagtacaat
aagggagggtacggaggctcggcccagtcacaggccaagtcagcgggcagcggcccaggg
aaagatgattctacagtcaagagtgttctggagaaagcaccaggactgtcagggtcaggt
accagtggaggagtacctgacatgggaggttcaatctacagcaaaactcagtcgtttgac
aagcagggcttccacacggggacaccacctcccttcagcctgccttcagcactgggtgga
acagggcccctgaaccccgggggtgctcctggttacgcccctgctcccttcctgcacatc
ctgccaccgcaccaacagccccactcccaactgctgcaccatcacctcacacaggacgga
cagggtggtcctggtcagcgcagtcagtccagcagcatgcagcagaagacccaaggcagc
aagtccagctacggcagctccccctactgggccaactga

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