Larimichthys crocea (large yellow croaker): 104920371
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Entry
104920371 CDS
T04659
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104920371 (sart3)
03036 Chromosome and associated proteins [BR:
lco03036
]
104920371 (sart3)
Spliceosome [BR:
lco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104920371 (sart3)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104920371 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
RRM_11
PRP6_TPR
HAT_Syf1_M
FAT
Lsm_interact
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
104920371
NCBI-ProteinID:
XP_019130887
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All DBs
Position
III:28537014..28544875
Genome browser
AA seq
952 aa
AA seq
DB search
MAASSNAEQTQLQDMEEEEDAGMEEREMESDGEEEGGGGEGEEGEEGMGEENSDDEEDES
SEDEKENEAEIQRLEEQLSINAFDYNCHVDLIKLLKQEGELFRLRKARQKMSELFPLTEE
IWLDWLKDEIRLTEEEPNREKVYELFERAVKDYLCPDIWLEYAQYSIGGMGSPGGIDKVR
AIFERAVTAVGLHMTKGQTVWEAYREFENAILSTVQPPPGRIPSREEQELLNTQLGRIHT
LFRRQLAIPLMDMEATYAEYEEWSDSGVSENVISQYKKASQQMEKCRPFEESLLAAEPPK
LAEYQTYIDFELKEGDPARVQITYERTLAENCLVPDMWAKYTTYLDRQLKVKDLVLSTHE
RAVRNCPWTMGLWKSYVLALERHGADHHTVSDVFEKALNAGFIQATDYVEIWQAYLDYLR
RRVDFSKESSKELEELRGAFSRSLDYMKQDVEERFGESGDPSCIIMQIWARIEAHHCKNM
QKARELWDSIMTKGNAKYANMWLEYYNLERSYGDPLHCRKALHRAVQCTSDYPEHVSEVL
LTFERVEGSLEDWDVAVQKTETRLNRINEQRAKAAEKEANLARQEEERADQRRKGKSEKK
AQKKFQKGTRTGEKRKAEQDDYHDEWNDDADQAPKRHRGNGDQAKEEYMETETGLFGRNA
PPGFKPPPPGAKRAQQGDDKPELRNDNSSVFISNLAYTLEEPEAKLRTLFETCGPIKQIR
PVFSNKGNFKGYGYVQFESTVSVAEALKLDRREVEGRPMFVSPCVDKNKNPEFKVFKYNA
SMEKQKIFISGLPFSCTKEQLDELCKSHGTLKDVRLVTYRSGKPKGLAYVEFAEEAQAAQ
AVQKMDGMEVDGNKISVAISNPPRRNMMDKPGSNRPTTDMMPRQVFGSRGRGRTQLSLLP
RSLHRQSGPVSKVENGNSAEPVPTTASAAAANAAGETKPLSNSDFARMLLSK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcgagcaacgcagagcaaacgcagttgcaagacatggaggaggaggaagat
gcgggaatggaggagagggagatggagtcggacggagaagaagaaggaggaggaggagaa
ggagaggagggagaagagggcatgggggaagaaaattcagacgacgaagaggatgaatcg
tcggaggacgagaaagaaaacgaagccgagatccaacggctggaggagcagctgtcaatc
aatgctttcgactacaactgccacgtggatctcatcaaactactcaagcaggagggagag
cttttccgcctgcgaaaggcaaggcagaagatgagcgaacttttcccgctcactgaagag
atctggctagactggctcaaagatgagatccgtctgactgaggaggagccgaaccgggag
aaagtatatgaactttttgagagagctgtaaaagactatctctgtccagatatttggctt
gaatatgctcagtattcaattggtgggatggggtcaccaggtggaatagacaaggtgaga
gccatctttgagagagctgtgacagctgtggggcttcacatgacgaagggacagacggtg
tgggaggcgtacagagagtttgagaacgccattctgtccacagtgcagcctcctcctggc
aggattcccagccgtgaggagcaggagctgctgaacactcagcttgggcgcatccataca
ctgtttcgtcgccagctggccatccccttaatggacatggaagccacgtatgcagagtat
gaggagtggtctgacagcggggtgtctgagaacgttataagtcagtacaaaaaggcttcg
cagcagatggagaagtgcagacctttcgaggagtcactgctggcagcagaacctcctaag
ctggcagagtatcagacctacatcgactttgaactaaaagagggcgacccagcacgggtc
cagataacctatgagcggactctggcagagaactgcctggtaccagacatgtgggcaaaa
tacaccacatatcttgatcgtcagctgaaggtcaaagacttggttctttcgactcatgaa
cgtgccgtcaggaactgcccctggacgatgggtctgtggaagagctacgtgctagctctg
gagcggcatggagctgaccatcacaccgtctccgatgtttttgaaaaggcgctgaatgca
ggtttcattcaagcgacggactatgtggagatctggcaggcgtacctcgactacctgagg
aggcgtgtggatttcagcaaagaatcgagtaaagaattggaggagctacgaggagctttc
tcacgatctctggactacatgaagcaagatgtagaagaaaggtttggtgaaagtggagat
ccttcttgtatcataatgcagatctgggcaaggatagaggcccaccactgcaagaacatg
caaaaagcccgagaactctgggacagcatcatgacaaaagggaatgccaaatatgccaac
atgtggctggagtactataaccttgaaaggtcttacggagatccacttcactgtcggaaa
gctctgcacagagcagttcagtgcacctcagactaccctgagcacgtgtctgaagtcctg
ctcacgtttgagagagtggaaggttctctggaggactgggacgtggcagtgcagaagacg
gagacccggctgaacaggattaatgagcaacgtgcaaaggcggctgagaaagaagccaac
ctggctcgccaagaggaggagagagctgatcagcgacgaaaaggcaagtcggagaagaag
gcacagaagaagttccagaagggaactcgaactggggagaagaggaaagcggagcaggat
gattatcacgatgagtggaatgatgatgcagatcaagctcctaaaaggcacagaggaaat
ggggaccaagccaaagaggaatacatggaaactgagacgggactctttgggaggaacgct
ccccctggctttaaacctcctccacctggcgctaaaagggcccagcagggagatgacaag
ccggagcttcgcaacgacaacagcagcgttttcatcagcaacctggcatacacgctggag
gagccagaggcaaagctcaggactctgtttgagacctgtggtcccatcaaacagattcga
cctgtcttcagcaacaaagggaacttcaaaggctacggctacgtacagtttgaatctaca
gtgtctgtcgccgaagccctgaagctggacaggcgagaggtggagggcaggcccatgttt
gtgtcgccgtgtgtggacaaaaacaaaaatcctgagtttaaggtgtttaagtacaacgca
tccatggagaaacagaagatcttcatctctggactgccgttctcttgcactaaagagcaa
ctggatgaactctgcaaaagtcacggcaccctcaaagatgttcgtctggtcacgtatcgc
tcaggaaagcccaagggtctggcatatgttgagtttgcagaagaagctcaagcagctcag
gcggttcagaaaatggacggcatggaggtggacggcaacaaaatctctgttgctataagc
aacccgcctcgcaggaacatgatggataaacctggttccaacaggcccacaacagacatg
atgcctcgccaggtcttcggatcgagaggacgaggacgcacccagctctcattactccct
cgatctctgcaccgacaaagtggacctgtaagcaaagtggagaacgggaactcagctgag
ccggtcccgacaacagccagcgcagcagcagcgaacgcagctggagagacgaaacctttg
tcaaattcagactttgccaggatgcttctcagcaagtga
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