Larimichthys crocea (large yellow croaker): 104920456
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Entry
104920456 CDS
T04659
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04620
Toll-like receptor signaling pathway
lco04621
NOD-like receptor signaling pathway
lco04622
RIG-I-like receptor signaling pathway
lco04623
Cytosolic DNA-sensing pathway
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104920456 (irf7)
04621 NOD-like receptor signaling pathway
104920456 (irf7)
04622 RIG-I-like receptor signaling pathway
104920456 (irf7)
04623 Cytosolic DNA-sensing pathway
104920456 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104920456 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104920456 (irf7)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104920456 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104920456
NCBI-ProteinID:
NP_001290279
UniProt:
E5D5L7
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Position
XXI:complement(6620085..6624411)
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AA seq
431 aa
AA seq
DB search
MQSPPKPQFASWLIEQVETGQYTGLCYVDQNRFRVPWKHNSRKDCNEEDSKIFRAWAVAS
GKINEFPNDKARWKTNFRCALNNLSVRFKMIKDNSKNSDDPHKIYEIVNTEYNYESQAKQ
EDTNMIPDIYNSPTEYIPPGTEHNLLNNLMALDLGTNPAGEQLWADNYDPQNTAVLESYP
VASEIPPQLLPEQPVYCDVNPAQVLSSPLQPTIYDLEISIHYRKREMLNTRLSTNRLQLH
YRYEVPELNSHHLCFPSTEDLLDHKQIDFTNRILNSIQRGLLLEVRDTGIYASRQDRCHV
FASTSDPSVAHPDPRKLPQNTMVELLSFEKYVHELKQFKENNGGSPEYTINMCFGEKFPD
GKALEKKLIVVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLISSVFSLPTA
ELDSALAAELY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctcccaagcctcagtttgccagctggcttatagagcaggtggagacgggc
cagtacacgggcctgtgctatgtggaccaaaacaggttcagagtcccctggaagcacaac
tccaggaaggactgcaatgaagaggacagtaaaatattccgggcatgggcagtagcaagt
ggtaaaataaacgagttccccaatgacaaggccaggtggaaaaccaacttccgatgcgct
ctgaataacctctctgtgcgcttcaagatgataaaggataattccaagaattcagacgac
cctcataaaatctacgagattgtcaacactgagtacaactatgaaagtcaggcaaaacaa
gaagataccaacatgattccagatatctacaactcgcccacagagtacatccccccagga
actgagcacaatctgcttaacaatctcatggcattggatctgggaaccaatccagcaggg
gagcaactgtgggcagacaactatgatccacaaaacacagctgtcctggaaagctatcct
gtagcatccgagattcccccacagctgcttccagagcagccagtttactgcgacgtaaat
cctgcacaagtcctcagttcacctctgcagccaaccatatacgatctggagatctccatc
cactacaggaaaagagaaatgcttaacaccaggttgtcaacaaaccgtctgcagctccac
taccgctacgaggtccctgagctcaatagccatcatctctgcttcccctccactgaggat
ctactggaccacaaacagattgatttcaccaaccgcatccttaacagcatccagagaggt
ctactccttgaagtacgggatactggtatctatgcctcgaggcaggacaggtgccatgtg
ttcgcaagcaccagcgaccccagtgtggctcacccagatccaagaaaacttccccagaac
accatggtggagctccttagctttgagaaatatgtgcatgagctaaaacagtttaaagag
aacaatggtggttctccggagtacaccatcaatatgtgctttggagagaagtttcctgat
ggaaaagctttggagaagaaacttatcgtagtcaaggtggtccctctgatctgtcgacac
tttcacgagatggcccaaatggagggggcttcgtctcttcacagtgccaatgtcagccta
cagatctcgcacaacagcctctatgatctcattagctctgtctttagtctgccgacagct
gagctagactcagcactggctgctgagctttattga
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