Larimichthys crocea (large yellow croaker): 104920461
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Entry
104920461 CDS
T04659
Symbol
itga11
Name
(RefSeq) integrin alpha-11 isoform X1
KO
K06587
integrin alpha 11
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104920461 (itga11)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104920461 (itga11)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104920461 (itga11)
04810 Regulation of actin cytoskeleton
104920461 (itga11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104920461 (itga11)
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104920461 (itga11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
104920461
NCBI-ProteinID:
XP_010731036
UniProt:
A0A6G0J1B5
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Position
VIII:3008090..3075662
Genome browser
AA seq
1200 aa
AA seq
DB search
MHACTGKHMEYYCFLLLWICSQQLGFHDCFNIDTKRHRIIKGPKQAQFGYTVQQHVAAGG
EKWLLVGAPYEMNGPYQTGDVYKCSLNRRTNGNGCSKLNLGRISLTNVSERKDKMRLGMT
LTSNPKDNSFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIV
LDGSNSIYPWYEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKR
AHNINQRGGEETNTALGINVARSQAFKQGGRRGAKKVMIVITDGESHDSVDLQQAIEDSE
KDGITRYAIAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALKDIVDALGER
IFSLEGTSKNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPPKS
SYTQEFPEELKNHGAYLGYTVTSVVSARNGRLLVAGAPRFNHTGKVIIFTLKNSGNLTIL
HSLKGQQIGSYYGSEIAPVDIDGDGITDNLLVAAPMFFSGGLEKGKVYIYRVTELNRFIL
EGALEIHNGGQNARFGSALAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRIIRK
YKQRVAAVDLAPGLQYFGRSIHGTMDMNNDGSVDLAVGSLGAVVLLWSQSVVRIYTTVRF
EPSKINIFVKDCQRGGKDVTCMSAIVCFNITARTAITPTQEIGIKYNVSIAERRFNPRAM
LDNLTMLQPQNLTLFPGEETCEHIYFHVMETTDYARPIVFSVQVGLQDPDQGPVLDDSWP
TVVRTELPFWNGCDEDDRCIPDLALQSMTDLMTRNQFCAQPVQSRGAFCRHLSEGGTEGS
LRVIEGNRRRMVVDVRLENKGENAYSARLNITYTPNLHFSSLIVKDNSDIKIECYIEDKL
RNEKICNVSAPFMRAKTQVSFRLEFEFSRNVFLHHVRVILEAGSDGEEITTMDNFNDIYY
SLKYEADLLFTRDSNPTRYDIKSELALEEPGVIGPPFNFTFQIQNLGYFPVRALQLNIEI
PEMTKNGNQLLQISDFYIDQRDGTHCLPPQHVAQSRSSPEDLSRFSRLNQSNTLTLPIQC
TVNVASYREIAVRITGALRLDTLHALKFKILELVTSASVELPSSSPMFLHEERPVRHIIL
EIRKEGDYRIPTWIIIGSTLGGLLLLALLSLALWKLGFFRRQKRRDEDEQETNGKVAEER
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttgcaccggcaaacatatggagtactactgcttcctcctgctctggatctgc
agccagcagttaggattccatgactgcttcaatatcgacacaaaaagacacaggatcatc
aaaggccccaaacaagcccagtttggatacactgttcagcagcacgtggcagctggagga
gaaaagtggttattagttggtgccccgtatgaaatgaatggcccttaccagacaggagat
gtttataaatgctcactaaacagacgaaccaatggcaatggttgctccaagctcaactta
ggaaggatatctctgaccaatgtgtcggagcgaaaggacaagatgaggctgggtatgact
ctcacatctaatcctaaagacaacagttttgtggcctgtgggccgctatggtcctatgag
tgtggcagctcttactacagcactggcatttgctccagagtcaatgcaagcttcaagttc
tccagaacgattgcccctgcctttcagagatgtgagacctatatggacatagtgatcgtg
ctggatggctcaaactccatctacccctggtatgaagtgcaggcttttctcatcaacatt
cttcagaagttctatattggaccaggtcaaatacaggttggagtcgttcagtatggtgag
aaggtagtccatgaattcaaactcagcgactacaaatctgtggaggaagtggtgaaaaga
gcacacaatatcaaccaacgcggtggagaggagaccaacacagctcttggcatcaatgta
gcacgctcacaagctttcaaacaaggaggtcgacgcggtgccaagaaggtgatgatagtg
ataactgatggagagtcacatgacagtgtggatctccaacaagccattgaggacagcgaa
aaggacggcatcacccgttatgccattgctgtccttggctactacaaccgtagaggaata
aaccctgaagcctttctcaatgaaatcaagtacatcgccagcgacccagatgacaaacac
ttctttaatgtgacggatgagtcggcgctgaaggatattgtggatgcacttggagagcgc
atcttcagtttggaaggaaccagtaaaaatgggacagcgtttggcctccagatgtctcag
gctggattttccgcacacaacgtcgaggatggtattctggtgggcgctgttggggcttac
gactggaatggagcagtgctgaaggaaacacgacagggcaaggtggtccctcccaagtct
tcctacacacaggagttccctgaagagctcaaaaaccatggtgcctacttgggttacact
gtgacgtctgtggtgtcagccagaaatggtcgtctacttgtagcaggagctccgcgattt
aaccacaccggcaaagtcatcatcttcactctgaagaactccggcaacctcaccatcctg
cactccctcaaagggcagcagatcggctcctactatggcagtgagattgcacctgtggat
attgatggagacggtataaccgacaaccttttggtggcagcacccatgtttttcagtgga
ggcttggagaagggaaaagtctacatctacagagtgacagagctgaatcgtttcatcctt
gaaggggcgttggagatccataatggtggccagaacgctcgctttggatcagcgctggct
cctgtccctgatctgaacggcgatggcttcaatgacttggtggtgggagccccattggaa
gatgatcacaaaggagccatttatgttttcttcagccagcacaacagaataatacgcaaa
tacaaacagagggtagcagcagtagatttggctcctggcctgcagtattttggccgcagt
atccatggcacgatggatatgaataatgatggttcggtggatctggcagttggatctctt
ggtgctgttgttctcctttggtcacagagcgttgtccggatatataccactgtcaggttt
gagcccagtaagatcaacatctttgtgaaggactgtcagagaggtggcaaagacgtgacc
tgtatgtcagccattgtatgtttcaacatcactgccaggacagccattactcccacacag
gaaattggaatcaaatataacgtctccattgcggagagacgtttcaatcctcgggccatg
ctggacaacttgaccatgctgcagccacaaaacctgaccctctttcctggagaagagacc
tgcgagcacatctacttccacgtcatggagaccacagattatgcaaggcccatagtgttt
tctgtacaagtggggcttcaagatccagaccaaggaccagttctagatgacagctggcct
actgttgtgaggactgagctgcccttctggaacggctgtgacgaggatgaccgctgcata
cccgaccttgcattgcagagtatgaccgacctgatgactcgaaatcagttttgtgcgcag
cccgtacagtctcgtggtgctttctgccgccatctaagtgaaggagggacagagggatct
ctgcgggttatagagggaaacaggaggaggatggtggtggatgtccgattggagaacaaa
ggagagaacgcctacagtgcacgcctaaatatcacttacacacccaacctacacttctca
agcctcatagtgaaggacaactccgacatcaaaatagagtgttacattgaggacaaactg
aggaatgagaagatctgcaatgtcagtgctcccttcatgagggctaaaactcaggtatca
tttcgtctggagtttgagttcagtcgtaacgtcttcctacaccacgtcagggttatcctg
gaggctggcagcgatggcgaggaaattaccacaatggataatttcaatgatatctattat
tcactgaaatacgaggcagaccttctcttcactagggattcaaatccgactcggtatgat
atcaaatcagagctggcgctggaggagcctggagttataggtcccccttttaacttcact
ttccagatccagaaccttggatactttccggtgagggctctgcagctgaacattgaaatc
ccagaaatgacaaaaaatgggaaccagctcctgcagatatcagatttttatattgaccag
agggacggtacacactgtttaccacctcagcatgtggcacagagcagatcgtcacccgag
gacctttcccgcttctcccgcttgaaccaatccaacactctcacgctgccaatccaatgc
actgtcaacgtggcctcctacagagaaatcgcagttcgaatcacaggagcacttcgatta
gataccttacacgcactgaagtttaaaatcttggaactggtaaccagtgcatcggtggag
ctcccctcctccagccccatgtttttacacgaagagaggcctgtcagacatataatattg
gagatcaggaaggagggagattacagaatccctacctggattatcatcggtagcacgctg
ggaggactcttattgttagccctgctcagtctcgctctgtggaagcttggctttttccgg
aggcagaagaggagagacgaggacgagcaggagacaaacgggaaagtggccgaagaacgg
taa
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