Larimichthys crocea (large yellow croaker): 104920523
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Entry
104920523 CDS
T04659
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104920523 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104920523 (stau1)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104920523 (stau1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104920523 (stau1)
mRNA cycle factors
Stress granule specific factors
104920523 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
104920523
NCBI-ProteinID:
XP_010731107
UniProt:
A0A0F8AWW1
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All DBs
Position
VI:11653872..11660979
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AA seq
692 aa
AA seq
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MSQIQFQCPASPMPAASAPLQLGQPQPGYSIPCPSGTLPSESASQPIRSSSLPAGSATPY
NTTPVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALAETTLPKPTMRTPRNSPADGMTHSMELNALCMKLGKKPMYKPV
EPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPVGPMLYHMELSIGGQQFIGKGRTRQL
AKHDAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEVLKE
EGPPHMKSFVVCVTVGEFTGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPRIKK
KTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVTVCG
QSAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVTFFE
PGSVEDAALGSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGACQGSQAKDYSRPMPNPG
KATITAMIANELLYAGTSLTAETILKNKNNMNQLPHGPLTRPSEQLSYLASVQGLQVEYK
DFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQLNERTGNG
PVSRCGKQEIEGDLHLKQANSSTLAQTLDGTV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagatccagtttcagtgtccggctagccccatgcctgctgcctctgccccactg
cagctcgggcagccacagcctggctacagcatcccttgtccctcgggcaccctgccctcg
gagagtgccagtcagcccatcaggagctcctctctccccgcgggctcagccactccctac
aataccaccccagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagatccaacctgagtataagctgctttgtgagcaagga
ccagctcactccaagattttctcagttagactcacactgggagatcagcactgggaagca
gaggggaccagcatcaagaaagcccagcattcggctgctgcatctgccctcgctgagaca
acacttcccaagcccaccatgaggaccccccgtaacagcccagccgatggcatgacacat
agcatggagttaaatgcactatgcatgaagcttggtaaaaaacctatgtataaaccagtc
gagccctacccggggatgagaccaccaaacttcaactacaatgttcgggctccaggacct
taccagcgctctatgcaacagtactactacccttttcctccagtgggaccaatgttatac
cacatggagctttccatcggaggccagcagtttattggtaagggacgcacacggcagtta
gccaaacacgacgctgctgccaaggccctgaaagtgctgcacaaggagccaatattgcaa
cagttgccagtgatgaacggggagccagaggaggagaacctcaacaaatcagaaatcagc
caagtgtttgaaattgcacttaaacgcaacttacctgtcaactttgaggttttaaaggaa
gaaggccctccccacatgaagagttttgtagtgtgcgttacagtcggggagttcactgga
gagggtgaaggaaagagtaaaaagattgccaagaagctggcagcagcagcagtgctgggg
gagttgaagaggctaccccacatacccagtgtggaaaagacgctgccacgcatcaaaaag
aaaaccaaatccatcatcaagctgcagaccagcccagaatacggtcagggaatgaacccc
atcagccgcctggctcagatccagcaggccaaaaaggagaaagagccagagtacagcatg
gtgacagagagaggtctacctcggcgcagggagtttgtcatgcaggtgacagtgtgcggc
cagtctgcagagggaatgggacctagtaagaaggtggccaagaggaacgcagcggagaaa
atgcttgagctcttgggatataaagtgcctcaacctcagccccctaaaccggcactcaaa
actgatgaaaagaccccggtgaaaaagcctggtgatgggcgcaaagtgaccttctttgaa
cctggctctgtagaagatgcggctttgggttccaaggaggaggacttccgcctgccttac
ctgagccaccagcagctgcctgcaggcatcctgcccatggtcccagaggtggctcaagct
gtcggggcctgccaaggatcccaggccaaggactacagtcgacctatgcccaacccaggc
aaggccactatcactgccatgattgccaacgagctgctttatgcagggacatccctaact
gctgagactatcctaaaaaacaaaaataacatgaaccaactgccccacggacccctcacc
aggccttcagagcagctcagctaccttgcatctgtgcaaggcctgcaggtggaatacaaa
gattttcccaaaaacaataagaatgagtttgtgtcactgattaactgctcctcccagcca
ccgctcatcagtcatgggattgggaaagatgtagaatcctgtcatgatatggctgcactg
aatatactgaagttactttctgaattggaccagcagctaaatgaaaggacaggaaatgga
ccagtctctcggtgtggcaagcaggaaatcgaaggtgacttgcacctcaaacaggctaac
tcaagcacattggcacagaccctggatggcactgtttag
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