Larimichthys crocea (large yellow croaker): 104920547
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Entry
104920547 CDS
T04659
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23369
ADAMTS-like protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104920547
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
104920547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
TSP1_CCN
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
104920547
NCBI-ProteinID:
XP_019109502
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Position
XIII:complement(15594384..15632112)
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AA seq
1199 aa
AA seq
DB search
MQLGLLFRLYVLWGFVVVTTSVTKAAKRKVAGRQSRQVFEVEPIEGVWSIWGEWSGCSQT
CGVGVSQRSRECLSPPPPQTPPLSHSPPNWAGYLPGGIGGPVVSPVRPYYPPHYPGQHPS
YHSPSIPTNHNPGLSLFRNTNTGGGGAPVQGQSNPSPPFYQPEFSPNNQEHVSVYRSPYH
APSHGYNQPARVIRRPTNPGAVRPGGGGSRRSVSSNREGLPARRSSNIRPGQFGYGRVPF
SLPLHRPNRQARHTGNGTDTATPEPGLAANEDDETNEKEEEEVWSNGEGREARRSEVEVE
EEGEGEERTDAPAVEELPTTTTTTGNPHRHVDRPSHTNTERGRARVPSSHHFSRSSSTSR
LPSRQRFDWHSVTAPPPPIPPLSRPNSPAAASPFSTSLHRSSHVHRDRELHQGFSPQVPP
AGNVYPLQHSHIPHLAVESGRDGGRGAPQVYRCPGPEKEYRKCFSQVCGGGALESRAEQC
AAFNTQEFMGRLYNWEPFTEVGADKQCELTCRPAGYRFYVRQAERVRDGTPCINVSSNDV
CVEGQCLTEGCDGVLGSGSVIDKCGVCGGRDASCRKVTGSFQNVTVPLGYHKILDIPSGA
TFINITERRASPNYLAMRSGTGASVVNGRWAVDPPGEYQAGGTTFAYTRPRAQAEGEEEK
GESLKAPGPTTTQLQLYIIFHKENPGIDYEFYVPVEKKEIERERLMERERETPRERHRER
EPARAPLRSPLTVSVEDPPPAPPPISVPSFPSSSSSSSSVFSPPSLDRWTPERSRPRGSA
PNRNARIPPRTDLPLDTQPPYVWRKGGLTECSASCGKGSQYRVILCIDRHADEEVPERKC
DSAAKPVPEEEPCNTHPCPPFWEANSWSECSVSCGPGVQQRQLQCRQSFGDRSTMVHPQR
CANLTPPESTQACQLALCSHWEVSSDWSMCSVDCGVGRRTRSVRCVSDQGSIVSDMECNS
RARPQGSEECNMGPCVTNWYFTTWSNTCSAQCGPGVQRREVVCLTRGGVRDGGGGGDCVV
EKPAEMKACNSGPCVPTSMWYSSPWSQCNVPCGNGTQRRDIICVEKTGNDFTVAAASECA
HLDKPAAVQKCEMGECQPQWFTTEWSACSRSCGKGLQMREVRCLTQDKKHSQDCDLTTKP
EQEQICNTIPCSPQVSDENCRDRRHNCVMVVQARLCVYSYYKSACCASCTQSAQRAKRH
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcggtttactattcaggctctatgtgctgtggggatttgtggtggtcacgacc
tccgtgaccaaggccgccaagaggaaggtggcaggccgacaatccagacaggtgtttgag
gtggagcctatagagggggtgtggtctatctggggggagtggtccggatgctctcagacc
tgtggcgtcggtgtctcacagaggagcagggagtgtttatcccctccacctccccaaacc
cctcccctctcccactctccacctaactgggcaggttatttgcccgggggcattggaggc
cctgtcgtctcacctgtgcgaccctactaccctccacattaccccgggcaacacccttct
tatcactccccttccatccccaccaatcacaacccaggattgtcactgtttaggaatacc
aacaccgggggaggaggagcacctgtacagggacagtccaatccatcacctcctttttac
cagccagagttctccccaaacaatcaagagcatgtatctgtttatcgatctccctaccat
gctccctcacatggctacaaccagccagctcgggtcatccgaaggccgaccaatccagga
gcagtgaggcctggaggaggcgggagcagaaggtctgtctcctccaatcgggagggttta
ccagcgaggaggtcttccaacatccgtccaggtcagtttgggtacggcagagtcccgttc
tctctgcctttacatcgtcctaaccggcaggctcgccacactggtaacggtactgacact
gcaacacctgaacctggactagccgccaatgaagacgacgagaccaatgagaaagaggaa
gaagaggtgtggagtaatggagaaggcagggaggcgaggaggagtgaggtggaggtggag
gaggagggggagggggaggagagaaccgatgcacctgctgttgaggagttgcccacaacg
accaccacaactggtaacccacaccgtcacgtggacagaccctcacacaccaacacagag
cgtgggagagcaagagtcccatcctctcaccacttctctcgctcctcgtcaacatcccgc
ctgcccagccgccaacggtttgactggcactccgtcaccgcgccgcctcctcccatccct
cccctctcccgcccaaactcccccgctgccgcttcacctttctctacgtctctgcaccgc
tccagccacgtgcacagagacagggagcttcaccaaggttttagtcctcaagtcccacca
gccggcaacgtctacccactacagcactcccacatcccgcatctggccgtcgaatcaggc
agggatggaggaagaggagctcctcaggtctatagatgccctgggccggagaaggagtac
cgcaagtgcttctcgcaggtgtgtggaggcggtgcgttggagtccagagcagagcagtgt
gcagcctttaacacccaggagttcatgggtcgcctctacaactgggaacctttcactgag
gttggtgcggacaagcagtgcgagctgacctgcagacctgctggctaccgtttctatgtt
cgtcaggccgagcgcgtccgagacgggactccctgcatcaatgtcagctcaaatgacgtg
tgtgtagaaggacaatgtctgaccgagggttgcgacggggttctgggctctggctctgtg
attgacaagtgtggggtgtgtggcgggagagacgcctcctgtcgaaaggtgacaggaagc
ttccaaaatgttacggttccccttggttaccacaagatcctggacatcccatccggagct
actttcattaacatcacggagagacgagccagccctaattacctggccatgagaagtggc
accggggcttcagtggtgaatgggcgttgggctgtggaccctccaggggagtaccaagca
ggagggaccactttcgcctacacccgacctagagcacaggcagagggggaggaagagaaa
ggcgagtccctcaaggctccaggacccaccacgacacagctacagctttatatcattttc
cacaaggagaacccgggcatcgactatgagttttatgtccccgtggagaagaaggagata
gagagggagaggctgatggagagagagcgggaaacacccagagagaggcacagggagcga
gagccggcgagggcaccacttcgcagtcctctcactgtgtcagtagaagaccctccccct
gcccctcctcctatttctgtcccttctttcccctcttcctcctcctcctcctcctctgtg
ttttctcctccttccttggaccggtggacacctgagaggtcacgtcctcgaggttctgca
cccaacaggaacgctcggatccctcctcgcactgacctgccgctggacactcagccgcca
tacgtgtggagaaaagggggactcactgagtgttctgcttcctgtggcaaaggttctcag
tacagagtcattctgtgtatagaccgccatgcagacgaggaagtccctgagaggaaatgt
gactctgcagccaaacctgtccccgaggaggagccttgtaacacacatccctgcccacca
ttctgggaggccaattcatggtcagagtgcagtgtgtcctgtggccccggggtgcagcag
aggcagctccagtgcaggcagagctttggggaccgctccaccatggtccacccacagcgc
tgtgccaacctcaccccgccagagtccacccaggcgtgtcagctcgccctctgctcccac
tgggaggtcagctccgactggagcatgtgctcagtggactgtggtgttggtaggaggaca
aggagcgtgcggtgcgtcagtgatcagggcagcatcgttagtgacatggagtgcaactcc
agggctcgcccgcaaggaagtgaggagtgcaacatggggccgtgtgtaaccaactggtac
ttcactacctggtccaatacttgttcagcgcagtgtggcccaggggtacagaggagggag
gtggtgtgtctgactcgaggaggggtcagggatggtggaggaggaggggactgtgttgtg
gaaaaaccggcagagatgaaggcctgcaacagcggtccgtgtgtgccaacatccatgtgg
tacagcagcccctggtcacagtgtaatgtcccatgtgggaatggaactcagcgacgagac
atcatttgtgtcgagaagactgggaacgattttactgtcgcggcggccagcgagtgtgca
catctggacaagcctgccgctgtgcagaagtgtgagatgggagagtgtcagccgcagtgg
ttcacaacagaatggagcgcgtgctcacgttcttgtggaaaaggcttacaaatgagggag
gtacggtgtctaacacaagacaaaaaacacagccaggactgtgatttgaccacaaaacct
gaacaggagcaaatctgcaacacaataccctgcagtccacaagtctcagatgaaaactgc
cgggacagacgtcacaactgtgtgatggtggttcaggccaggctgtgcgtctactcctac
tacaagagcgcctgctgtgcctcgtgtactcagagtgctcagcgtgccaagaggcactga
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