Larimichthys crocea (large yellow croaker): 104920632
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Entry
104920632 CDS
T04659
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104920632
Membrane trafficking [BR:
lco04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104920632
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
Ig_2
ig
LRR_RPS2
LRR_Zer-1
LRR_9
LRR_LRWD1
Ig_C17orf99
V-set
LRRNT
Ig_5
Motif
Other DBs
NCBI-GeneID:
104920632
NCBI-ProteinID:
XP_010731256
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Position
VIII:4857374..4874404
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AA seq
623 aa
AA seq
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MTVLVKSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNAQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKNLGPEEFINYPQLEELQLNENIISSIEPGAFSNLM
NLRILGLRNNQLKLIQLGVFTGMTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLQLRYLNVTVIRDYSFKRLY
RLRVLEISHMPALDTMTPKCLYGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
HTVEGNQLSNLQKLQAFHLAGGRLAAIEPYSFRGLNHLRVLNVSDNSLSTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIVDYKVQESHVDEGTTVHFACQAEGDPVPVIMWLSPKKDYITTKTVGSRLSVSN
DGTLEVRYSQIQDNGTYTCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPND
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDSTKSSIEVEYV
PRKEETEEASPTEASVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaaaaagtaggatggtgtcgggggaggcaggagggcacagctacttg
gttgcgtgctggcagcccatcctgatcctgatgctgggcaccgtcctttctggatctacc
accggttgcccctcccgatgcgactgcaacgcccaggagcgttcagtcgtgtgccatcgc
cggagactggcagcacttcctgagggtattccgactgaaacgaggctgctagacctcagc
aaaaaccgtctcaagaatctgggacccgaggagttcattaattaccctcagctggaagag
ctgcaacttaacgaaaacataatttcatccattgagcccggggcttttagcaaccttatg
aaccttcgaattctaggtttgcgcaacaaccaactgaagctcattcagcttggggtgttc
acaggcatgaccaacctcacccagctggatattagtgagaacaaaattgtcattctgctt
gactatatgttccaggagctgtataacctgagggcactggaggttggtgacaatgaccta
gtattcatctctccccgatcttttcatggcctcagcaaccttgaaagcctcaatattgag
ggatgcaacctggcctctgtgcccactgatgcacttagccatctgcataacctgttgtca
cttcaattacgctatctcaacgtcactgtcataagggattactcctttaagaggctgtat
cggctcagagtgctagagatttctcatatgcctgccctggataccatgaccccaaaatgc
ttgtatggactcaacctcacatcactgtcaatcacaaactgtaatcttaccgtcatcccc
taccaagctatcagtcacctgagatatcttcggtttttgaatctgtctttcaatcccatt
catactgtggaaggaaaccaactttctaatctacagaagctccaggcttttcatttggct
ggtggaagattagctgccattgagccctattcttttcgaggactcaaccacctccgtgta
ctcaatgtatccgataatagcttgagcaccctggaagagtccgtcttccactcagtcgga
aacctggaaaccctggctttgtatgacaacccattggcctgtgattgtcgcttgctctgg
gtgttccgccggcgatggaggctcaacttcaacagacaacagcccatgtgtgcttcgcct
gaggttgtgcaaggaaaagagttcaaggacttcccagacatccttccctctgactatttc
atctgccagaaatcaaaaatcgtggattataaggttcaagaaagccatgtagatgaagga
actacagttcattttgcttgccaggctgagggtgatccagtccctgtgataatgtggctg
tcccctaaaaaggactacatcactaccaaaactgtggggtcaagactttctgtgtctaat
gatggcacattggaggtgcgttactcccaaatccaggacaacggcacctacacgtgcatt
gcaagcaatgcagccggcaatgacaccaaagctgcccacctatttgtgcatagttactcc
cccaattggccccaccagccaaacaagacatttgcctttatctccaaccagcccaatgat
gaaggtgctaatgtgacccgggccacagttccatttccatttgatgtaaagacactcatc
attgcaaccaccatgggatttatctctttccttggagttgtcctcttctgtcttgtaata
ttattcctctggagtagagggaaagacagcactaagtcaagtatagaggttgaatatgtg
ccacgtaaagaggaaacagaggaggccagtccaactgaggcatccgtacaattcaacatg
aaaatcatgtga
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