Larimichthys crocea (large yellow croaker): 104920806
Help
Entry
104920806 CDS
T04659
Symbol
smyd1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00310
Lysine degradation
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104920806 (smyd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104920806 (smyd1)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
104920806 (smyd1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
104920806 (smyd1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104920806 (smyd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
Motif
Other DBs
NCBI-GeneID:
104920806
NCBI-ProteinID:
XP_010731479
UniProt:
A0A6G0IKC2
LinkDB
All DBs
Position
III:complement(37595609..37601468)
Genome browser
AA seq
489 aa
AA seq
DB search
MENVAIFDSPGKGRGLKATKEFWAGDVIFSEPSFAAVVFDSLAERICHSCFRRQDKLQRC
GQCKFAHYCDRTCQRAGWAEHKQECGAIKTYGKIPNENIRLVARIMWRIDKEGYVVSDMQ
LTTLDELEDHIPDMQEDELQELKVDIHNFLDYWPRTSKQHTIDVISHIFGVVNCNGFTVS
DQKGLQAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTMFHSQRRIEIRSLGKISEG
EELTIAYVDYLNLSEERQRLLKTQYFFDCTCEHCKNHLKDDLKLGGTEVDGVKPSEEEVK
ETTDYCFQMLEKMDKARLNADYHEVVKICKECIAKTEPILADTHIYQLRIWSTLSEVQAY
LQYFNDAADYSRKMVDGYVKLYHPNNAALGMSAMRAGVTHWQAGEIEVGHGMICKAYAIL
MVTHGPTHPITKDLEAMRMQTEMELRMFKQNEYVYHSMRDAALKNKPMAMMHEPRSMEEG
IKNLFHRKK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggcaatatttgactcacctggaaaggggaggggtctgaaggctaccaag
gagttttgggccggagatgtgattttttctgagcccagtttcgcagctgttgtgtttgac
agtctagcagaacgtatttgccacagctgtttccgaagacaagacaagctacagaggtgt
ggccagtgcaaatttgcccattactgtgaccgaacctgtcagcgtgctggctgggctgaa
cacaagcaagaatgtggtgccatcaaaacctatggcaaaataccgaatgagaacatccgt
ttggtggcccgcatcatgtggcgtattgacaaggaggggtacgtggtgtctgacatgcag
ctgaccacactggatgaactagaggaccacattcctgacatgcaagaggatgagttgcag
gagttaaaagtggacatccacaacttcctggactactggcctcgtaccagcaaacagcac
acgattgacgttatctcacatatttttggagtggttaactgtaatggtttcactgtcagc
gaccagaagggccttcaggcagttggagttggtcttttccccaatttgtgtctagtgaat
catgactgctggccaaactgcaccgtgatcctcaaccatggcaatcaatcggctgtgaat
actatgtttcattctcaacggaggattgagattcgttctctaggtaagatctcagaggga
gaggagctgacaatcgcatatgtggactacttgaatttgtcggaagagagacaaagactg
ctgaaaacacaatacttctttgactgcacatgtgagcactgcaagaaccacctcaaagat
gacttgaagttggggggaacggaagtggatggagtcaagccctcagaggaggaggtgaaa
gagacaacagattactgtttccaaatgctggagaagatggacaaggctcgattaaatgcc
gactaccatgaggtggtaaaaatctgcaaggagtgcatagcgaaaactgagccaattttg
gctgacactcacatctaccagttgaggatatggagcacattaagcgaggtgcaagcttac
ctgcagtactttaacgatgctgcagactattcccgcaaaatggtggatggatacgtgaaa
ctgtaccaccccaacaatgcagctctcggtatgtctgctatgcgagcaggagtgactcat
tggcaagctggggagatagaggttggccacgggatgatctgcaaggcctacgccattctc
atggtcacccacggcccaacacaccccatcaccaaggacttggaggcgatgcgcatgcag
acagaaatggagctgaggatgttcaagcagaatgagtatgtctaccacagtatgagagat
gctgctctgaagaacaaaccaatggccatgatgcatgaacccagatctatggaggaggga
atcaagaatctcttccaccggaagaagtaa
DBGET
integrated database retrieval system
