Larimichthys crocea (large yellow croaker): 104920819
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Entry
104920819 CDS
T04659
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104920819 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104920819 (dmxl1)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104920819 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
104920819 (dmxl1)
RAVE complex
104920819 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104920819
NCBI-ProteinID:
XP_010731494
LinkDB
All DBs
Position
III:complement(37172640..37223400)
Genome browser
AA seq
3105 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLTKVNCQWQKTGQFVLKSMVRNLAW
HPTGSTLLTGSSSLQLWSNVDGVKDEAEEEVTQTEMTIRDSHSAWRCIWESKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSSVSRLFTPPEHSVGVQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGVVCNVLLTCCKDSVCRLWAETLLPGDSLLSGHHNNHIAGQHSD
TLRCAGSSRKNTCNGKTQGRTAQELSFQESLYTSFYRDGPQPSLTGCLPHHQNRHYNHKK
SSSSMPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELHFT
LAMEVFLQQLRGSLEHQNECSQEEPEDEDNFDEEDNGSRPNDPQGPEAAELPLAAVKHQV
DVLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDA
ISLSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYGGQGKAAPSSSLRLSIFT
PNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLT
TSHHNALRTPEVDNILATPCSSGFSHSTSLPRGSRPSRASLGAVSQDPNAIYSELILWRV
DPVGPLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGAYCNSPSACFVASDGHSL
RLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDTITGFQGKETQLL
HVFEEDLILGSERTESTQETPDSPHSALSEPAFSARFFLVVVELTPTGRSLLHMWHLHLA
AQPVTMEDAMTEKGATPASSCNSSQFNFDTFSSPVTPKSKPCTSNLQSACRLTLTTHRLY
SQEMALPEGVEAISITPSAGHLSASCSLPAGRVPYLLATSCSDGKVRFWRCNVIVTKPSN
VDNLVYQWEEWPLLVEEMLPNSSVVSVPGRPIEVTCCHAGRIAVAYRQMPNTPQNSTPHL
NSHGLLTFPPTLASSPNVHYNNTFLTPTLTVQRSPNLANTREPLVHIGIFQCESTGGSQW
ILEQIIVLDGTDPTSNCDISSSTTGSASTPCNMDFSIPIENCLGSTTKNLVHLDWVSQEN
GSHVLTVGIGTKIYMYGCLSGKPPELCLSSDASRDQSSSRLVLLRSVDLVSSVEGSLPIP
VSLSWVRDGILVVGMDCEMHVYSQWQPPAPPKPTVTIAQDTDISSSISSIISAVRQSQEE
GLSPGVPLSSLAPPKRALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTLPQ
YHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVTLKDSSITNPEKRVRSRTISAGGSTA
RDRKMFSKAENSTPDYTEISSIPPLPLYALLAADEDMSPKPDKVGSVSGDSGHGSRHSDA
YDELFQTPSIADLDPLDNDQEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTR
MEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRA
QLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTDKLRRCI
EKVARASLQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAAL
KNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFETASTYK
KILRRHVLGQDKQIQAQQDPFLRSMAHWVLEDYSRALDTLLEQPGNSASCGSTVSQCDTG
SSPVSTCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERRLFFTA
AYTHLQAGCPMLALEVLSKMPKVRKHSKLTNQEDTGISTELSVGSKNGQTSDPDWSQQTL
NGYESNGNSLSDSVLSFDWSQPSLTLPDESLELKWDSDKNDEEDDEDEEETKNDKSGTTS
EGILPVLEHAVSPLTELVTGEDSEDSDDFIEPSDDILAAQLKFTACLKIMTNELRTLSTG
YELDGGKLRYQLYQWLEREVVALQRCCSYKPCLPELSVQGDGPVSGLVEEEQPGSPRGDN
QRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSTQSAVTPCC
QQTSIPLLMACTANVKTVVANPIVYLTNLTHDILQTINALDSPPHPDIVNNEIYVLHTLA
ASLSACIYQCLCDGHTHSHVNHFTGTVYQSVLLSQKQPVRTVSMDESVQPNTSPAQWPGI
ASLVRLLSSAGEESQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIMAHPLNSKLWV
TVFGGGARIPVIEKPSSPTRTPPPASPSGSERKSRRFRLLSSRSGSREDSGMERESPSSP
KHCPVVEQEAASIFKERFIPPDLSIWDYFITKPLLPPSQSRIEYDSEESQGSQDEEDEDD
DYEDVFDPNSPQREHSSHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCH
AVLKTLQRWEQVLQKRLEIFGGPPSQYISTHLQDESTAPGPALLRHKALFEPSNTPFRTS
HPSALPVKRLWQFLVKQDEVQETFIRHIFTKKRDPNESGEDQTDFMKCSGMEETGNHQTE
SDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDD
DEAETKGVGGDDFLVIHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRGASVMIKR
NINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKF
GIVDADGGLSLWQTNTSGNAPKPYLTVQCHNKTAHDFVFVGSSSLIATAGLSADNRNVCL
WDTLVTPANCLVHAFCCHESGATVLAMAPRQQLLITGGRKGWISVLELCHRHQRQSFQAH
DSPVKALAVDPTEDCFISGSSEGNIKVWSLATQCPLYTFPNEHARQSLFRNLGTGVMQIE
VGPANHIFSCGADGTMKMRILPNRFSVVNNNNNHGNLKNDVKFII
NT seq
9318 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcactggggctgtcaaccctggagacaattgtttctctgta
ggcagcgtcaacaatgtgccattcacggcctatgcgtcaggttgtgacgtggtgattttg
ggcagtgactttgagcgactgcagatcatcccaggggccaaacatggcaacatccaggtc
ggctgtgtcgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg
tgtgtctttgagcctgttcagcacccagatcagaaagacacatcgctgactaaggtgaac
tgccaatggcagaagactggtcaatttgtattaaagtctatggtacggaacctggcctgg
caccccacaggcagcactctcttaacgggctctagtagcctccagttgtggtctaatgtt
gatggagtgaaagatgaagctgaagaagaggtaacacagacagagatgaccataagagac
tctcattctgcctggaggtgcatctgggagagcaagacggcctctccagtcagtttaatg
aagttctcacctgatggggaattctttgctactgctggacaggacgactgccttgtaaag
gtgtggtacagcacaagtaagtggaagtcaagtgtttccagactcttcacacctccagag
cacagtgtcggtgtccagggagagctggccttttcctttgtctacctggcccatccccgc
tctgttaccggcttctcttggcggaagaccagcaagtacatgccacgaggtgtagtgtgt
aacgttttgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacacttttg
ccaggtgatagcctcctgtctggtcaccataacaaccacatcgctggccaacacagtgac
acactcagatgtgctggttcttctaggaaaaacacctgcaatgggaagacgcaaggaaga
acagcacaggaattgagttttcaagaatcgttgtacacatccttctatcgggacgggccc
caaccctctctgaccggctgcctgcctcatcatcagaacagacactataaccacaagaag
agcagcagcagcatgccccacgccaatgctctttgccacttccatattgcagcaagcatc
aaccctgccacagacattcctcttctgccctcgatctcttctctgagtgctgtggatgac
gaggaacctggtggcccctttactgtccactggctcaacaacaaagaacttcatttcact
ttagcaatggaagtcttcctgcagcagcttcgaggcagcttggagcatcagaatgaatgc
tcccaggaagagcctgaagatgaggacaactttgatgaagaagataatggtagcaggcca
aatgacccccaaggacccgaggctgcagagcttcctttggcagcagtgaagcaccaggtg
gatgtgctgttagaggagtggaataaaggagcggacatgttgttcagcatccatcctatg
gacggctctctgttagtctggcatgtggactggttagatgaataccagccaggcatgttc
agacaagcacaggtgtcatttgtgtcccgtatacctgtagcgttccctacaggtgatgca
atctccttgagccacagtgtggttatgtatgcctgcaacaagaacgtggatctggctatc
caacatggcagacagcgaccacctgggagcacgttacctcaaacaaaatcggctctaata
agctacggaggtcaaggaaaagctgcgcctagcagcagtcttcgactaagcattttcacc
cccaatgtccttatgatctccaaacatgctgatggctccctgaaccagtgggcagtcagc
ttcgctgaggactctgcgttctccactgtgctcagcgtctctcacaagtcacggtactgt
ggccaccgcttccacctcaatgacctagcttgtcattcattactccctctcctcctcacc
acctcacaccacaatgccttgaggacaccagaggtagacaacatcctggctactccttgc
tcttctggtttctctcattcaacatctctgccacgtgggtcacggcccagccgggcgtcc
cttggtgcagtttcccaggatcccaatgcgatctacagtgagctgattttatggagagtg
gatcctgtcggcccactgtccttgtcaggaggggtctccgagctagctcggattaattct
ctccatgcatcagcgtttgctaatgtagcctggctgcccacgctcattcccagcagctgt
ttaggtgcgtactgcaactctcccagcgcttgctttgtggcaagtgacggccactcactc
agattgtatcaggctgttattgaagcaaagaaacttctcagtgagctctccaatcctgag
atatcaaaatatgttggggaggtgttcaacatcatcagtcagcaatccacagcaaagcca
ggatgtattatcgagctggacaccatcactggctttcaggggaaggagacgcagctcctg
catgtttttgaggaggatctgatccttggcagtgagagaacagagagcacacaggaaact
cctgattctcctcactctgccttaagtgagccggccttctctgcacgctttttcctcgtg
gtggtcgaattgaccccgacaggtcgctcactcctccatatgtggcatctccatcttgct
gctcaaccagtcactatggaagatgccatgacagagaagggtgcaaccccagcttcttct
tgtaacagctctcagtttaactttgacacgttcagttctccagttactccgaaaagtaaa
ccctgcacttccaatctgcagagtgcctgtcgcctcactctaacaacacacaggctgtac
agtcaagagatggctctgccagaaggggtggaggccatcagtatcacaccatcagcaggc
catctgagtgcatcatgttctctgccagctggccgtgtgccttacctgcttgcaacttcc
tgctctgatggaaaggtacgcttctggaggtgtaatgtcattgtgacaaagccttcgaat
gtggacaacttggtgtaccaatgggaggagtggcctctcctggtggaagagatgctcccc
aacagcagcgtagtaagcgtgccaggtcgccccatagaggtcacctgctgtcacgctgga
cggattgccgtagcttacaggcagatgccaaacacacctcagaactcaacacctcatctg
aactctcacggactgctgacctttcctcccaccttggcttcttcccctaatgtgcactat
aacaacacctttctgaccccaaccctcacagtacagcgtagcccaaatctagcaaacact
agggaaccactggtccacattggcatcttccagtgtgagtccactggtggctcacagtgg
attctagagcagatcatagttctggatggcactgatcccacaagtaactgtgatattagc
agtagcacaacgggaagtgccagtactccatgtaacatggacttctcgatacccattgag
aactgtcttggttctaccactaagaacctggttcatttggattgggtctcccaagagaat
gggtcacatgttctgactgttggtatcggaacaaagatttatatgtacggttgtctctct
gggaagcctccagaactctgtctatcctctgatgccagtagagaccagagctcatctcgc
ctggttctacttcgatcagtcgatctggtctcctctgttgaaggctcattgcccattcca
gtctccctctcctgggtacgagatggcatcttggtagtaggcatggactgcgagatgcac
gtctactcccagtggcagcccccagcaccgcccaaacccactgtcacaattgcccaagac
accgacatcagcagcagcatctcatccataatctcagctgtcagacagagccaggaggag
ggtcttagtcctggggtcccactgtcttcactggcacctcctaaaagggccctgacaaga
tcgatgatgagcctggctcaaaagcttagcgggaagagaacagcttacgacttgcctgtg
gagatggaagattctgggctttttgaagcagctcaccaactatttcccactctgccccag
taccaccccgtacagttactggaacttatggatctcgggaaggttcatcgtgctaaagcc
atcctctcccacctggtgaaatgcattgctggagaaattgtcacacttaaagacagcagc
atcaccaatcccgagaaacgcgtgcgctctcgaactatcagcgctggaggcagcacagcc
agggaccggaagatgttcagcaaagcggagaactccacccccgactacacagagataagc
tccatccctcccctgcctctgtacgcacttctggcagctgatgaggatatgtcaccaaaa
cctgataaagtgggcagtgtgagcggagatagtgggcatggttcccgtcacagtgatgct
tatgacgagctctttcaaacacccagcatagcggacctggaccctctggacaacgatcaa
gaggaaactgggaacaaagtcattgatctgtctcagtacagtccaacatactttggccca
gaacatgcccaggtcctgtccagtcacctccttcattccagtttgccaggcttaacgcgt
atggagcaaatgtctctcatggcactggccgacaccatcgctaccacaagcacagacctc
aaggacagccagggcaagagcaaaggtggagagacactggatgagtgtggtctgaagttc
ttgctggcggtcagacttcataccttcctctctacctccctgcctccagcacaccgagca
cagctgctacgacaaggcctgtcaacatgtcattacgcctgggctttccactctgaagct
gaggaggagctgctaaacatgctgcctgccttacagaagggagagcccacctggcctgag
ctgcgctctatgggtgtgggctggtggctgcgcagcaccgacaagctacgcaggtgtatt
gagaaggttgccagggcttctttgcagagaaacaatgatcctctggatgcagctatattt
taccttgcactgaaaaagaaggcagtggtctggggattgtacaggtcgcagaagaatgcc
aaaatgacagagtttttccgcaacaacttcagcgaagaccggtggaggaaagcagcacta
aaaaatgccttttctctgttgggaaagcagcggttccagcattctgcagccttcttcctt
ctagctggctcccttaaggatgctgtggaggtgtgtatagagaaaatgcaggacctacag
ctcgccctggtgatctccagattgtatgagtctgagtttgagacggcatccacctacaaa
aagatccttcggagacatgttctgggacaagacaaacagattcaagcccagcaggacccg
ttcttgcggagcatggctcactgggtcctggaggattacagcagggcattggacactctg
ctcgagcagcctggtaacagcgccagttgtggctccactgtgagccaatgtgacactggt
tcctctcctgtgtctacatgtaaccctgaagttttcaatttttacacctaccttcgtacc
cacccacttctcctgcgccgtcattttggctcttcagacaaggccaaagttggtctgact
gctgagggtcgcagagctgactccattagcctggaggagagaagactgtttttcacagct
gcatacacacacttgcaagctggctgccccatgctagcacttgaagtcctgtcaaagatg
cccaaagtccgcaagcattccaaactcaccaatcaggaggacacaggcatctctactgaa
ctcagcgttgggagcaagaatggacaaacgtcagatccggactggtctcagcagactctg
aacggctacgagtccaatggaaacagtttgtcagattcagtgttgagttttgactggagc
cagccatcactaacgcttccagacgagtccctggagctgaagtgggacagtgacaaaaat
gatgaggaagatgatgaggatgaagaagagactaaaaatgataagagcggtacaacttca
gagggcatcctgcctgtcctggaacatgctgtgtctcctctaacggagttggtgacggga
gaggacagtgaggatagcgatgacttcatagaaccatctgatgacattttggcagcccag
ctcaagtttactgcctgcttgaagattatgaccaacgagctccggacactgtcgacaggg
tatgaactggatggagggaagctgcgttaccagctctaccagtggctcgagagagaggtg
gtggctctccagcgttgctgcagctacaagccctgcttgccagagctgtctgtccagggt
gatggccctgtttctggtttggtggaggaggaacagcccgggagtcctcgtggtgacaac
cagaggagcagaagacactggctgcagagtaaccagcccttactgaggatgtttctgagc
tactgcagtttgcatggctcccacggtggaggcctggcctctgtacgcatggagctcata
ttattgctgcaagagtctcaccaggatgactccacccaatcagcagtaacgccatgctgt
cagcaaacctctatccctcttctgatggcttgcacagccaatgtaaagacagtggttgca
aatcccatcgtctacctgaccaacctgactcatgacatcttgcagaccatcaatgcactc
gactctcccccacatcccgatattgttaacaatgagatctacgtgctgcacacactggct
gcttccctgtccgcctgtatatatcagtgtctgtgtgatggacacacccacagccatgtg
aaccatttcacaggaaccgtgtatcagagtgtgttgctgtctcagaaacagccagtcaga
actgtcagcatggatgagtccgttcagcccaacacttccccagcacagtggccaggtatc
gcctctctggttcgcctgttgagctcagcaggtgaggagagccagccgggcttagctgtg
ctgctctgtgagatcctgactgctgtcttcctcagtctgtttgttcacggcatggccacc
cactccagcaacgagctgtttcgcatcatggcccacccccttaacagcaagctttgggtg
actgtttttggaggaggcgcccggatccctgttatagagaaacccagcagcccaaccaga
acacccccaccagcctcaccaagtggttcagagaggaagtcaagaagattcaggcttctg
tcatcacgtagtggatccagagaggactctgggatggagagggagagtccgtccagtccc
aagcattgccctgtggtggaacaagaagcagcctccatctttaaagaacgatttatccct
ccggaccttagcatttgggattactttatcaccaagcctttgctgcctccatcacaaagt
agaatagaatatgactcagaggagagccagggcagtcaagatgaagaggatgaagatgat
gattatgaagatgtgtttgaccccaactcaccgcagagagagcattctagtcacaattca
tacagttggtgtttgatgcgtctggcaatggttcagctggtgttggtcaacctcaagtcc
ttttacccaatggcaggatacgatctattagatctgcctgtgggctcgcctctgtgtcac
gctgtgctaaagaccctgcagcgctgggagcaggtgctgcagaaaagactagagatcttc
gggggtcccccttctcagtacatctccacccacctccaggatgaatcaaccgcacctggt
ccagccctgctcagacacaaggccctgtttgaaccatccaacaccccgttcaggactagt
cacccttcagcactgccagtgaagcgtctgtggcagtttttggtcaagcaggacgaagtg
caggagactttcattagacacatctttaccaagaaacgggacccgaatgagtcgggtgag
gaccagactgactttatgaaatgttcagggatggaggagacaggaaaccatcagactgag
tcagatctgggctcccccggaggaaaggcacgcatcatccacaaggaatctgacatcatc
acagccttcgccatcaacaaggcaaatcgtaattgtttagtcatggcctccacccatgac
attcaggagttggatgtgtcatccatcttggccacacagatcttgacatggatcgatgat
gatgaggctgaaaccaaaggtgttggtggtgatgacttcctggtgatccatgcacgcgat
gactttgccgctctccatggcaccacaccgtacactcacagcagccctggcacacccatt
aacatgccatggctcggaggagtgcaaacgggtcggggtgcatctgtgatgatcaagaga
aatatcaacaatgtgagaagaatgacctcccatcccacgctgccttactacctgacagga
gctcaggatggtagcgtgaggatgttcgagtggggtcactcccagcagatcatctgcttc
agaagtccaggcaactccagagtcaccaggatacgattcaaccaccagggaaacaagttc
ggtattgtagatgctgatggaggtttgagtctctggcagaccaacacgagtgggaacgca
cccaaaccgtatctgacggtgcagtgccacaacaagacggctcacgactttgtcttcgtg
ggctcctcctccctcattgccactgcaggtctttcagcagacaacaggaacgtctgtctg
tgggacactctggtgactcctgcaaactgcctcgtacatgccttctgctgccacgaatct
ggtgctacggtgcttgcgatggctcccaggcagcagctgcttatcacaggtgggaggaag
ggttggattagcgtcttggagctttgtcaccggcaccaacgccagagcttccaggcccac
gactcaccggtcaaagcactggcagtcgatccgactgaggactgcttcatcagtggatca
tctgagggcaatattaaggtttggagcctggccactcagtgtccactctacaccttcccc
aatgagcacgctcgccagtcgctgttcaggaacctcggcactggcgtcatgcagatcgag
gtgggaccggccaatcacatcttctcctgcggcgctgacggaaccatgaagatgaggatc
ctccccaaccgctttagtgttgtcaataacaacaacaaccatggcaacctcaagaatgat
gtcaagttcatcatatag
DBGET
integrated database retrieval system
