Larimichthys crocea (large yellow croaker): 104920841
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Entry
104920841 CDS
T04659
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lco01100
Metabolic pathways
Module
lco_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104920841
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104920841
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
104920841
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
104920841
Glycosyltransferases [BR:
lco01003
]
Glycan extension
O-Glycan
104920841
BRITE hierarchy
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GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATP-synt_D
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
104920841
NCBI-ProteinID:
XP_019120018
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All DBs
Position
III:complement(36989513..36998932)
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AA seq
534 aa
AA seq
DB search
MFKRWLLTLLARVGLIVLGLCCCLSLFYLLACKPTSHNSQQSLVWSGGATSKEGYMALLQ
EREDSHRHYINSLTKQIAQLKEALQERTQQLQESLDKAKTKGILPQGLESLHKTPTQTDL
KEFLRSQLNQAEVNSGVKLPSEYAVIPFDTFTLRRVYQLETGLTRHPEERPARRDRRDEL
IGTVETALHILNGPHQHTDNTRRKHTHSPSDFIEGMTRIERDRGTVYELMFKGDGPRDFT
QLVLFRPFGPVVKVKSESLDTRNILINIIVPLSKRADAFRQFISNFREVCIKQDGRVHLT
VVYFGRDQIDQVKAMMDQTTRETRFRSFTLIQLNEEFSRGRGLEVGARAWRRSQNVLLFF
CDVDIHFTADFLTSCRLNAEPGKKVYYPVLFSQYNPSIIYRNDTLLPPVQQQLVMRKETG
FWRDFGFGMTCQYRSDFINIGGFDRSIKGWGLEDVHLYRKYLHSKLMVIRSPSRSLFHLW
HEKKCADELPPDKYKMCMQTKAMSEASHGQLGELFFKREIELHLNSQKQTNKGA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacggtggcttttaaccctgttggcccgtgttggccttattgtgctgggcctc
tgctgctgtctgtctctgttttacctcctggcttgtaaaccaacatctcacaacagccag
cagtctctggtgtggtctggaggggccacaagtaaggaaggatacatggccttgttgcag
gagagggaggattctcatagacattacatcaacagcctgacaaagcagatagcccagcta
aaggaggctctccaggagaggacacagcagcttcaggagtccctggataaagctaaaaca
aaggggattctgcctcagggtctggagagtctgcacaaaactccaacacagacagacctg
aaggagttcctccgctcacagctgaaccaggcggaggtgaactccggggtaaagcttccc
agcgaatatgcagtgattccttttgacactttcaccctgaggagagtgtaccagctagag
acggggctgaccaggcacccagaggagaggcctgcgaggagagaccgcagggacgagttg
ataggcactgtggaaacagctctgcacatcctgaatgggcctcaccaacacacagacaac
acaaggagaaaacatacacactctccatcagacttcatagaggggatgactcgtatagag
cgggacaggggaaccgtctatgagctgatgtttaaaggggacgggccgcgggatttcact
cagctcgttctcttcaggcctttcggtcccgtggtgaaagtgaagagcgagagtctagac
acacgcaacatcctcatcaacatcattgtacctctttccaagagggctgatgcattcagg
cagttcatcagcaacttcagagaagtgtgcatcaagcaggacggcagggttcatctcacg
gtggtctactttggtcgagatcagatagaccaggtgaaggccatgatggaccaaaccacc
agagagactcggttcagaagcttcactttgatccagttaaatgaggagttttctcgtggg
cgtggtttagaggtgggggccagggcatggagacggagccagaatgtcctgctcttcttc
tgtgatgttgacatccacttcaccgctgacttcttaacttcctgtcgtcttaatgcagag
cctggtaagaaagtgtactatccagtgctctttagccagtacaacccatctatcatctac
cgtaatgacactcttctaccccctgttcaacaacaactggtaatgagaaaggaaactgga
ttctggagagactttgggtttgggatgacgtgccagtataggtctgatttcatcaacata
ggtggttttgatcgtagtatcaaaggttgggggttagaggacgtacacctgtacaggaag
tacctacacagcaagctgatggtgattcgctctccatctcgcagtcttttccacttgtgg
catgagaaaaagtgcgcagatgagcttccaccagacaagtacaaaatgtgcatgcagact
aaagccatgagcgaagcctcacacggccagctgggggagctgtttttcaaacgagagatt
gagcttcatttgaactctcagaagcagacaaacaaaggagcataa
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