Larimichthys crocea (large yellow croaker): 104920858
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Entry
104920858 CDS
T04659
Symbol
plcb1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00562
Inositol phosphate metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04070
Phosphatidylinositol signaling system
lco04081
Hormone signaling
lco04082
Neuroactive ligand signaling
lco04261
Adrenergic signaling in cardiomyocytes
lco04270
Vascular smooth muscle contraction
lco04310
Wnt signaling pathway
lco04371
Apelin signaling pathway
lco04540
Gap junction
lco04621
NOD-like receptor signaling pathway
lco04912
GnRH signaling pathway
lco04916
Melanogenesis
Module
lco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104920858 (plcb1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104920858 (plcb1)
04070 Phosphatidylinositol signaling system
104920858 (plcb1)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104920858 (plcb1)
04081 Hormone signaling
104920858 (plcb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104920858 (plcb1)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
104920858 (plcb1)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104920858 (plcb1)
Endocytosis
Macropinocytosis
Phospholipase C
104920858 (plcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
104920858
NCBI-ProteinID:
XP_010731541
UniProt:
A0A6G0I6T7
LinkDB
All DBs
Position
XI:complement(15140539..15237128)
Genome browser
AA seq
1245 aa
AA seq
DB search
MAGAQPGVHALQLKPVSVPESLRKGNKFMKWDDDSTTVTPVTLTVDPKGYFLYWTDQNKD
TDLLDIAYIKDARNGKCTKAPKEAKLRELLDVNTLAGKMENRMLTVVSGPDMVNITYLNF
MAFQEETAKEWAEELFNLASNLLVQNMSREACLEKAYTRLKLQLNPEGRIPVKNIFRMFS
ADRKRVETALENCNLPSGRNDSIPQEDFTPEVYNMFLNNICPRSELDHIFSDVGAKSRPY
LTVEQMTEFINNKQRDPRLNEILYPPLKPEQVQVLVDKYEPNASLAQKGQISVEGFARYL
SGEENSIIPPEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGNSSVEMYKQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTITTEISFKEVIEAIAESAFKTSPFPIILSFENHVDSPK
QQAKMAEYCRSIFGDALLTEPLEKYPLESGVPLPSPMELMGKILVKNKKKHHKTDGSTKK
KLSEQVSNTYSDSSSVCEPSSPSAGSTKEEMADPSQPPEVAELSLRPQGRKSIGEVEAES
EDEDDDDDDCKKGSMDEGTAGSEAFATEEMSNLVIYIQPVKFNTFEASKKINRSYQMSSF
VETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQTID
LSMQLNLGMYEYNGKCGYRLKPEFMRRPDKNFDPFTESTVDGIVANTLSVKIISGQFLSD
KKVGTYVEIDMFGLPVDTKRKAFKTKTSQGNAINPFWEEEAIVFKKVVLPTLASLRIAVF
EEGGKFIGHRIIPVSAIRPGYHYISLRNEKNQSLTLPALFVYVEVKDYVPDTFADVIEAL
SNPIRYVNLMEQRANQLAALTLEEGGEEEGDKEVEAGSDAPSESKVDQRVTLPAENGLSH
TLIITPKPPALVGPQPQSAGSLKPSAKTEDIIQSVLTEFEAQTLEELKQQKGFVREQRKQ
YKEMKELVRKHHRKTSELIKEHTARVSELQSQHQRRRSALQKSHKRDGKKSRSEQSLSTL
DQELCELDHESSQRLSELKEQQQQQLLTLRQEQYYSEKYQKREHIKQLVEKLTSIAEECQ
SAQHKKLRDICEKEKKDLKKKMDKKRQEKINEAKSKDKNVTEEEKLEINRSFVNEVVQYI
KRLEDAQSKRQERLLEKHKDIRQQILDERPKLQSDLDQEYQDKFRRLPVEIQEFVQDSSK
AKLSDDCVHGNLVASSTTEKLNHKAPQSEDDMEEGSLERVYDTPL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcacagcctggagttcatgcgctgcagctcaagccagtgtccgttcccgag
agcctaagaaagggcaacaaatttatgaaatgggatgatgattctaccactgtgaccccg
gtgactctaactgtggaccccaaaggttacttcctgtattggacggaccagaacaaggat
accgacctactggatatagcatacataaaagatgccagaaatgggaagtgcaccaaagca
ccgaaggaagcaaagctgcgggagctactggatgtcaacaccctggcggggaagatggag
aacaggatgctgacagtggtgagcggccccgacatggtcaacatcacctatctgaacttc
atggccttccaggaggagacggctaaggaatgggcggaagagctgttcaacctggcatct
aacctcttggtacagaacatgtccagagaggcctgccttgagaaagcatacactcggctg
aagctgcagctcaaccctgagggacgaatccctgtcaagaatatcttcaggatgttctca
gccgacaggaagcgagtggagacggccctggaaaactgtaacctcccttctggcagaaat
gactccatcccgcaggaagatttcactccagaggtctacaacatgttcctgaacaacatc
tgcccccgatctgagctggaccacatcttctctgatgtgggtgctaagagtcgtccatac
ctcaccgtggagcagatgacagagtttattaacaataaacagcgagaccctcgtctgaat
gagatactctacccccctctcaaaccagaacaggtccaggtgctcgtggacaaatatgaa
cctaacgcttcgctggcacagaaaggtcagatctcggtggaaggatttgccaggtatctg
agtggggaagagaacagcatcatcccccctgagaagctggaccagagcgaagacatgacc
cttccactctcccactatttcatcaactcctcacacaacacatacctcacagccggccag
cttgcggggaactcttcagtcgagatgtacaagcaggttctcctgtcagggtgccgctgc
attgaactggactgctggaaggggcgcaccacagaagaagagcccgtcatcactcatggc
ttcaccataacaactgaaatctccttcaaggaggtgatcgaggcgatagcagagagtgcc
ttcaagacctcgcccttccccatcatcctgtcttttgagaaccacgtggactcaccaaag
cagcaggctaagatggcagagtactgccggtcaatatttggagacgcattactgaccgaa
cctctggagaaatatcctctggagtctggtgtgccactacccagcccaatggagctgatg
ggaaagatcttggtgaaaaacaagaagaaacaccataagacagacggaagcaccaagaag
aaactgtctgagcaggtttccaacacctacagcgattcttccagcgtgtgtgagccctcc
tccccgagtgcaggctcaaccaaagaggagatggcagatccctcgcagcctcctgaggtt
gccgagctcagcctgaggccacagggcagaaagtctattggtgaagtggaggcagagagt
gaagatgaggacgatgatgacgacgactgtaaaaagggctcaatggatgagggtacagca
ggcagtgaggcatttgccacagaggaaatgtccaacctggttatctacatccagccagtc
aagtttaacaccttcgaggcttctaaaaagattaatcgcagctaccagatgtcatccttc
gtagagaccaaagctttggagcaactgaccaaatctcctgtcgaatttgtggaatacaac
aaactgcagctgagcaggatctaccctaaaggtacccgagtggattcatccaactacaac
cctcagctcttctggaacgccggctgtcagctggtggctctcaacttccaaacgattgat
ttgtccatgcagctgaacctgggcatgtatgagtacaacgggaaatgtggctatagactc
aaaccagagtttatgaggcggccggataaaaactttgaccctttcactgaaagcacagtg
gatgggattgtagccaacacactgtctgtaaagattatctcaggacagtttctgtcagat
aagaaagtaggcacatacgtggagatcgacatgttcggcttaccggtggacaccaagaga
aaagcattcaagaccaagacatctcagggcaatgccatcaatcctttctgggaagaggag
gctattgtcttcaagaaggttgttctgcccacacttgcttcactaaggatagctgtgttt
gaagaaggagggaagttcattggccaccgaatcattcctgtgtcagccatccgtccaggc
tatcactacatcagtctaaggaatgagaagaaccagtccctgacgctgcccgctctgttt
gtgtatgtagaagtaaaggactatgtcccagacacatttgcagacgtcattgaagccttg
tccaatcccatccgctatgtcaacctgatggagcagagagccaatcagttggctgctctc
accttggaggagggaggagaggaggagggcgacaaagaggtggaggcaggaagtgatgca
ccgtcagaatcgaaggtggaccagagggtaacactgcctgcagagaacggactgagccac
acactcattatcaccccgaaaccaccagcgctggtcggcccccagccccagtctgcaggc
tcattgaaaccatcggcaaagactgaagacatcattcaaagtgtcctcactgaatttgag
gctcagacacttgaggaattgaagcaacagaagggctttgtccgcgagcagaggaagcag
tacaaggagatgaaggagctggttcgtaaacaccaccgcaagaccagcgagctgatcaag
gagcacacggctcgtgtgtccgagctacagagccagcatcagcgtcggcgctctgccctg
cagaagagccacaaacgagacggtaagaaaagtcggtccgaacagtctctgtcgaccctg
gaccaggagctgtgtgagcttgaccatgagagcagccagaggctttcggagctgaaagag
cagcagcaacaacagctcctcacacttcgccaggagcagtactacagcgaaaagtaccag
aaacgagaacacatcaagcagctggttgagaagctaacctccatagcagaggagtgccag
agtgctcagcacaaaaagctcagagacatctgtgagaaagaaaagaaagatcttaagaag
aaaatggacaagaaacggcaagagaagatcaatgaagccaaatctaaagacaagaacgtg
acagaagaagagaagttagagatcaacagatcatttgtcaacgaagttgtgcagtacata
aaacggctggaagatgcgcaaagtaaaagacaggagagactgttggagaagcacaaggat
atacgccagcaaatcttggatgaaaggccaaagctacagagcgatctggaccaggagtac
caggacaaatttcggcggctacccgtggagatccaagagtttgttcaggacagcagcaag
gccaagcttagcgacgattgcgtccatgggaaccttgttgcctcctcaacaacagagaag
ctcaaccacaaggcaccgcagtcagaggacgacatggaggagggctcgttggaacgagtc
tacgacactcccctttag
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