Larimichthys crocea (large yellow croaker): 104920937
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Entry
104920937 CDS
T04659
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104920937 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104920937 (rpap2)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104920937 (rpap2)
Protein phosphatases and associated proteins [BR:
lco01009
]
HAD phosphatases
Fcp/Scp phosphatases
104920937 (rpap2)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104920937 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
104920937
NCBI-ProteinID:
XP_010731640
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Position
XII:complement(17952982..17962379)
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AA seq
685 aa
AA seq
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METEERRRSAGSLKNSKKGGKRVKALTAEEEARRREVVKEKLREKLELEKRALKIVERLL
EDSVAEEFLVDCAKFITPVNYKDTIEERSIAKLCGYPICPNKLGKIPTQQFKISTKTNKV
YDITERKCFCSNFCYKASKEFELQISTTPLWLRQHESPPQIKLLKKGDGVSSGSSGEEVI
MLERRLQEKDIEDPLATQPEDAHSSQLRSVAAEHSHSESSDIEQEQDFVSSMVCQRQGPR
VHWGDLPKRTDDDNKGERGKKDRRGGNEEEVDGHRSGDAGREGKMREYENGQESHSCKTE
VKTDTEKPKQLLSVNTDKLNEEHVSEENSSPEGPSVEEATAKLNLCNLSERITHTAPLPV
DSTATQADLLTSPPCEDSNPSTENEHLPSTLISTNHDSHNTALTDQLELNITQVGMSKRG
AAGLRDLLKNHTAGAKPDPIRLALLECLKKTLKDWSTDETLKFLYGAGHSLSSPFADVEE
DKEEEEEELDEDDFDDEDAERVDAGVQRKASAPAPDYETLQKEGQQLELRVREFYKGTWI
LPEEEEKPHGDEVTVQDQSTECPVLPLVDSNAQHLIQKRITVEKLTSCLKNIVGPLRLTM
TDVSADLNNLVRTFRFTNTNIIHKTPEWTLIAVVLLHLLSEVSAMVREALETPASVEYLN
TLMEELGLQEQDLLNLVRLFKTPAH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaggagaggaggaggagcgcaggctccctgaaaaactctaaaaaaggcggg
aaacgtgtcaaagcactgacagctgaagaagaagcacgaagaagggaggtggtgaaggag
aagttaagggagaagttggagctggagaaaagagccctgaagattgtggagcgtctcctg
gaggacagcgtggctgaagaatttctggttgactgtgcaaagttcattactcccgtgaat
tacaaagacactatagaggagagatccattgctaaactgtgtggttatcccatctgtcca
aataaactgggaaagatcccgactcagcagtttaaaatttctactaagaccaataaagtt
tacgacatcacagaacgcaagtgtttttgtagtaacttctgctacaaagcctccaaagag
tttgagctacaaatatcaactacacctctttggctcaggcagcatgaaagtcctccacaa
attaaattgctaaaaaaaggagatggtgtatccagcgggagttctggtgaggaggtgata
atgttggagaggcgtctccaagaaaaggacatcgaggaccctttggctactcaacctgag
gacgctcacagctctcagctccgatctgttgcagccgagcacagtcacagcgaaagcagc
gacattgaacaggagcaggactttgtctccagcatggtctgccagcggcagggacccagg
gtgcactggggcgacctgcctaaacgtacagatgatgacaataaaggtgaacgagggaag
aaagacagaagagggggcaatgaagaggaggttgatgggcatcgaagtggagacgcaggg
agggaaggaaaaatgagagaatatgagaacggtcaggagtcacattcatgtaaaaccgaa
gttaaaacagacactgaaaaacccaaacagctgctctcagtgaacacagacaaacttaat
gaggagcacgtgtcagaggagaacagttcgcctgagggacccagtgtggaagaagctaca
gccaagctgaatttgtgcaatttatctgagaggatcactcacactgcccccctgcctgtt
gactcaacagccacacaagcagatctactcacctctccaccatgtgaagattcaaacccc
tcaacagaaaacgaacatctcccttcgactctgatcagcacaaatcacgacagccacaac
actgcattgaccgaccaactggaactcaacatcacccaggtgggcatgagcaagagaggg
gcagcagggctacgagatctactcaagaaccacactgctggagccaaacctgatcccatc
cggctggctctcctcgagtgcctgaagaaaacattaaaagactggagcactgacgagacg
ctgaagttcctgtacggggctggtcattcactcagctctccttttgccgatgttgaagaa
gacaaagaggaggaggaagaggagctggacgaagacgactttgacgatgaggatgcagaa
agagttgatgctggggtgcagaggaaagcctctgctccagctccagactatgagacactg
cagaaggagggccagcagctggagctaagagtcagggaattttataaggggacctggatt
ctgcctgaggaggaggagaaaccgcatggagacgaggttacagtccaagaccagagcacg
gagtgcccagttctgccgctcgtggactccaatgctcagcatctcatccagaaacgaatc
acagtggaaaagctcaccagctgcctcaaaaacatcgtcggcccactgcgtctcaccatg
actgacgtctcagctgacctgaacaacttagtcaggactttcaggttcaccaacacaaac
atcatccacaaaactccagagtggacgctcatagccgttgtgcttctgcatctgttgtca
gaggtgtctgcgatggtgcgagaagctttggagacaccggcatctgtggagtatttgaac
acgctgatggaggagcttggccttcaggagcaggaccttctgaacttagtccggctgttt
aaaaccccggcacactga
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