Larimichthys crocea (large yellow croaker): 104920958
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Entry
104920958 CDS
T04659
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03272
Virion - Hepatitis viruses
lco04514
Cell adhesion molecules
lco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104920958
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104920958
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104920958
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104920958
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104920958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
MapZ_EC1
Motif
Other DBs
NCBI-GeneID:
104920958
NCBI-ProteinID:
XP_027141418
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Position
XII:17525329..17538391
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AA seq
552 aa
AA seq
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MYEPRYYDSPPVYSPPYSTTSQGLYPQRSVHTPQSQYVPYTYNVPPASYYMEEKPQHFYR
WFSPPGFVKTFKGATVLMCFLIFAFVASTLVWDMNGFGYGGYAVGAGGGVAGTELGYYGG
SYGYGSSYMTPQSAKAAMISMASINFLVSLGFLVGSFSRSRIMRGCRFYLTVFICDIILA
VLQGIIDIIFVIGVNPMSQSSQSMLYNPMLMMCQNIQGSPSFSGSAGAGFPGGFPMYNQY
LHHYCYMDPEEAVALVLGLMVVLVLSLSAYYAYKTRSKIWRHGKANIYWDEPLVRPSEGQ
DVQDWVRSEVNHVGDVRSTQQAPTVVVSERAAPDLRVENSVVSYGNGTVSIHSEGNYKSN
SLSAANSNRRGAEPLYQNSKVTVCTSSSSDENDSIRKPLPYHTKREQRKDREPRPAAQEV
LESQYETGYTTGDTGNELDQDHTAYLYRLYPEIISDEQRRQYKKEFDSDLARYKSLCAEM
DEISDQMHKLSRELDALDEGSMKYQGVADEYNRLKDLKKTPDYQAKKKQCKELRQKLFHI
KRLVKIYDQGLC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagcctcgctactatgatagccctccggtgtacagcccgccttacagcaccacc
tcccaaggcctttacccccaaaggagtgttcacacaccccagagccagtatgtcccttac
acctataatgttcctccagcctcctactacatggaggagaagcctcaacacttctatcgc
tggttttctcctcctggttttgtcaaaaccttcaaaggagctacagtactcatgtgtttc
ctcatcttcgccttcgtggcttcaaccttggtatgggacatgaatggatttgggtacggg
ggctacgctgttggagctggaggaggtgttgcagggacggagttgggatattatggaggc
agctatggctacggtagctcctacatgacaccacagtcagccaaggcggctatgatttca
atggcgtctattaacttcttggtttcactggggttcctggtggggagtttctcacggtca
cggatcatgcgtggatgcaggttctacctcactgtgttcatttgtgatatcatcttagct
gtccttcagggcatcatcgacatcatctttgtgatcggggtgaatccgatgtctcagagc
tcacagagcatgctctacaaccccatgctgatgatgtgccagaacattcagggtagtccc
agtttcagcggcagcgcaggggccggttttccaggcgggttccccatgtacaatcaatac
ctgcaccattactgctacatggacccagaggaggctgttgcgttagtgttgggtctgatg
gtggtgttggttctgtccctgtctgcttactacgcctacaagacccgcagcaagatttgg
cgccacggcaaagccaacatctactgggatgagccgctggtcaggccgtcagaggggcag
gatgtgcaggactgggtgagaagtgaagtgaaccatgttggagacgtacgcagcacccag
caggcacccactgttgttgtatcagagagagcagcacctgacctgagggtggagaatagt
gtggtctcctatggcaacgggaccgtcagcatccacagtgagggaaattataaaagcaac
agtttgtctgctgcaaacagcaatcgtcggggtgcagagcctttgtaccagaacagcaag
gtcactgtttgcaccagcagctcctcagatgagaatgacagcatcaggaaacctctacct
tatcatacaaagagggaacagaggaaagacagagagcccaggcctgctgctcaggaggtg
ttggagtcccagtatgaaactggttacaccactggagacactggcaatgagctggaccag
gaccacacagcttacctttacaggctgtaccccgagatcatttcagacgagcagcgccgg
cagtacaagaaggagtttgactctgatctggcccgctataagagcctctgtgctgaaatg
gatgaaatcagtgaccagatgcacaagctgagccgagaactggacgcattggacgagggc
tccatgaagtaccagggtgtggcagatgagtataatcgtctcaaagacctgaaaaagacg
ccagattatcaagcaaagaagaaacagtgcaaagaacttcggcaaaagcttttccacatc
aaacgtctggtgaaaatctatgaccaaggtctttgttag
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