Larimichthys crocea (large yellow croaker): 104920959
Help
Entry
104920959 CDS
T04659
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104920959
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104920959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
Ion_trans_2
CaMBD
DUF7310
Motif
Other DBs
NCBI-GeneID:
104920959
NCBI-ProteinID:
XP_027141443
LinkDB
All DBs
Position
XII:17456633..17512045
Genome browser
AA seq
1039 aa
AA seq
DB search
MRHRYAGAVHQHQIPDERQGSSKQSRDQVAPVFSLPPPPSSHHRDRTSTTAAHRQSLQEL
PCLSQPSRRPVHSGDPLPLASYDTAQRPSHRGSEPTTGHPAHLQQDPWAPTGSQQQQQHQ
HQPPPPPPQSEKQPVFPSCHCSFSEQEASFSQNQHHHPVDPLPPQPSPPFPPPIPPPPTS
SSSSLLFSRESKRGDRLRRSANNYQQASIVERCRGGGGAGGHRDHRQLLQQQHQQQQQQQ
HQQQQQQQHQQHSHLRLQQRDPSPEGIRANSQKGRSLNVCESTEANRRAFESQTQDLQQQ
QIPQLRAQQQLLVGSSLPINYCASGSGELCRTHQAPLLQQQEQQQQQQQQQQQRQQQQQQ
QQQGALGLCPQRPQHCEQDRNKSGRISAQGDQAHQPHSRDSRVTPPVTQQAYAGNSSATV
SNSSSKDSPNYGSSYHLWPESPHKGEERIRIDFHKATTEQKKLSHAGSKPSLSESSGRLP
QIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDP
SKASNESLVREGSGRGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVM
VTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAM
TYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLI
GRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTV
RVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALV
VAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVR
KHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKR
IGTLEDKLDSVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSERSWTS
TARRRRSPSTAPHTSSDSG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccaaatccccgacgaaaggcaagga
agcagcaagcagagccgagaccaagtcgctcctgttttcagcttgccgcccccgccctct
tctcaccaccgagaccgcacttcgaccaccgccgctcaccgccagagcctccaggagctc
ccctgtctgagccagccctcacggagacctgttcacagcggcgaccctctacctctggcg
agctacgacaccgcccagcgaccttcacaccgaggcagtgaacccaccaccgggcacccg
gcgcacctgcagcaggatccctgggccccgaccggctctcagcagcagcagcagcatcag
catcagccgccgccgccgccgccgcagtcggagaagcagcctgtttttccaagctgccac
tgcagtttttccgagcaggaggcgagcttttctcaaaatcagcaccaccatcctgtcgat
cctctcccaccgcagccctccccaccttttccgccgcctataccaccgccaccaacatct
tcctcctcctctctgctgttttcccgggaatctaaaagaggggatcgtctccgaaggagt
gccaataattaccaacaggcaagcatcgtggaacgctgcaggggaggaggaggagcagga
gggcaccgagaccacaggcagttgttgcagcaacagcatcagcagcagcagcagcaacag
catcagcagcagcagcagcaacagcatcaacagcacagtcatttaagactccaacagagg
gacccctcccctgaaggaatccgtgcaaactcacagaaagggcgctctttaaatgtatgt
gagtcaaccgaggctaacagaagagcatttgagtctcagactcaggacctgcagcagcaa
cagatcccacaattacgagcgcagcaacagctactggtggggagcagcttgcctatcaac
tactgcgccagcggctcaggagagctatgtaggactcaccaggctccactgctgcaacag
caagagcagcagcagcagcagcagcagcagcagcaacagcggcagcagcagcagcagcag
cagcagcaaggcgcactggggctctgtccccagcgtccgcagcactgtgaacaagaccgc
aataagtctgggaggatctccgcgcaaggcgatcaggcgcatcagccacacagccgcgac
tcccgcgtaacccccccggtaacacaacaggcatacgcggggaactcgtctgcgactgtc
agcaacagcagcagcaaagacagccccaactacggatcgagctatcacctgtggccagag
agcccgcataaaggagaggagaggatacgcatcgacttccataaggccactactgagcag
aagaagctgagccatgctggatccaagccctccctctccgagagcagtggccgactccct
cagatagccatgaacacctgcaagtacaatggcggagtggtgagaccactagtgggcagc
ctggcgtcctcgtcacgccgcaacctcgcggagctcgactcggagacgcagcccttgcag
acgcttcacagctctggcctggaggtggtggtgtccaagggcaacggcggcgaagacccc
agcaaggcatccaacgagagcttggtcagggagggcagcgggcgtggaggaggcagggcg
ccgcagaagaagaacagggacattggctacaagctcgggcaccggagggcgctgtttgag
aagcggaagcgactcagcgactacgcactcatcttcgggatgtttgggattgttgtcatg
gtgacagagacggaactgtcatggggggtttacactaaggaatcttcatactcatttgca
ctgaaatgccttatcagcctttccactgttatattgcttggtcttataataatgtaccat
gcccgggaaatccagctgtttatggtcgacaatggtgcggacgattggaggatagcaatg
acgtatgagcggatcttcttcattgtgctggagctgctggtttgtgccatccatcccatc
ccgggccagtacgtcttcacctggacggcgcggctggcctttacctacacgccgtctgtg
gccgacgctgacgtggacatcatcctctccatccccatgttcctgagactctacctgata
ggcagggtcatgttgctccacagtaagctgttcacggacgcttcgtctcgcagcatcggc
gccctcaacaagatcaacttcaacacacgctttgtcatgaagaccctcatgaccatctgt
ccaggaactgttctgctggtgttcagtatatcctcctggatcattgctgcatggactgtg
cgcgtctgtgagaggtatcatgacaaacaggaagtgaccagtaacttcctgggagccatg
tggctcatctcgattaccttcctctcgattggctacggggacatggtaccaaacacatac
tgtgggaaaggcgtgtgtctgcttacagggattatgggagctggttgcactgcactggtg
gttgcagtggtagccaggaagctggagttgaccaaggctgagaagcatgtccacaacttc
atgatggacacacaactctgcaaacgagtaaagaacacagctgccaatgtactcagggaa
acatggctcatctacaaacacactaagttggttaagaagatagaccacgccaaggtgcgg
aaacaccagcgcaagtttctccaagccattcaccaagctcagaaactgcgcagtgtgaag
atggagcagaggaaactcaatgaccaggccaacacgttggtggacctggcaaagacccag
aatgtgatgtatgacctggtgtcagagctgcaggagcgcagtgaggagctggacaagcgc
atcggcacattggaggacaagctggactcggtgacgggcagcctgcaggcgctgccctgc
ctcatctcccaagccataacccagcagcagcaggacttcctggacggctttgttcaccgc
tttcggcccgcctcactagcctcagagcgctccgaacgctctgagagatcctggacttcc
accgcccgtaggcggcgatctccctccacagcaccacacacctcctctgatagcggataa
DBGET
integrated database retrieval system
