Larimichthys crocea (large yellow croaker): 104920978
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Entry
104920978 CDS
T04659
Symbol
arvcf
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
KO
K28154
splicing regulator ARVCF
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104920978 (arvcf)
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104920978 (arvcf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
104920978
NCBI-ProteinID:
XP_027131405
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All DBs
Position
III:48354976..48546050
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AA seq
1000 aa
AA seq
DB search
MEDYDVRSAASILASVKEQEARFEQLTRALEEERRNVTLQLERANLPPNPPTSQPLAWQQ
VVMQEQSPSNATSLAMMQEPQEVVEETVTIEEDPGTPTSHVSVVTSDDGTTRRTETKDLS
TNVKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYLKNGGDRFITPQA
TSTLTRSYNNSYNDSYGETPESQYVRHYGLHDGYADLTDNYGSLSRGVNFRPPRYPYLPN
SYRPENSYTLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPEPYGLEDDRRSLGPEE
EEPYELEPDYSTANRRTLQGANRGRTHREPLRDGPRVRGYPDDPIEAELIDERHPYIHGM
YSAPLAQPERGSMASLDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAA
AYLQHLCYENDKIKKDVRQLKGIPVLVGLLDHPKSEVHRKACGALRNISYGKDNDNKVAI
RNCDGIPALVRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIPHSG
WEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVG
KKDMDNKSVENCVCIMRNLSYHVHKEVPGAEKFQDPSALQAPGSGGPQRKKKDDAGCFGG
KKAKEEWFNQGRKNGENDKNYDTLDLPKRAEPSKGFELLYQPEVVRLYLSLLTESQNYNT
LEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSID
RRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTDSSENARSLIQAQ
AIEKLVAINRTSQSARETKAASHVLQTVWSYKELRNALTKDGWNKSHFQPTVTTTPKATK
NGKPGYDDTTLPLMEKNQGTRKCGSGDMIPMDELGPDGYSTIDQRDKDCKYKTGDGSVDL
TEREPLKNDTNRKHYIRSNRPAVSLVDACDVKPQPVDSWV
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgatgttcgttcggcagccagcatcctggcctcagtgaaagagcaggag
gcacgttttgagcagctgacccgagcccttgaggaggagcgtcgcaacgtcaccctccag
ttagagcgtgccaacctgccacccaacccccctaccagccaacctctagcatggcagcag
gtggtgatgcaggagcagagccccagtaacgccacatccctggctatgatgcaggagccg
caggaggtggtggaggagacggtcaccatagaggaggacccgggaacccccacctcccac
gtctcggtggtcacctctgatgatggcactacacgacgcacagaaaccaaggacttgtca
actaacgtgaaggtgactaagatggtgaagacggtgaccacacggacagtgcgtcaggtg
ccactgggccctgatggcctgcccctgcctgagggttcgtccccactaggcagctacact
gactccatcgaccggcgctacttgaagaatggaggtgaccgcttcatcacgcctcaagca
acctccacccttacacgctcctacaacaactcctacaacgattcgtatggtgagacacca
gagagtcagtacgttcgccactacggcctgcacgatggctacgctgatttgacggacaac
tacggcagcctgtcacgtggcgtcaacttccggccgccccgctacccctacctgccaaac
agctaccgaccagagaacagctacacgctgcctatccgtaaagatgattatggccatgtg
gcccagccccaggtgcctatgggaagcagcaccgtggatctgaatcgctcacagccagag
cgcttccagcccgagccatatggcctggaggatgatcgccgcagcttgggccctgaagag
gaggagccatatgagctggagcccgactactccactgccaaccgacgcaccctgcagggg
gcaaaccggggtcgcacccaccgagaacctcttcgtgatggacctcgagtcagagggtac
ccagacgaccccatcgaggcagagctgatcgatgagcgccacccttatatccatggcatg
tattcagcaccactggcccagccggagagggggagcatggccagtctggaccgcatgggc
ggccggcgctcaccatccatcgacagcatccgcaaggacccgcgctggcgtgatccagac
ctacccgaggtcattgccatgctgggccatcccattgacccagtcaagtccaatgccgct
gcctatttgcagcacctctgttatgaaaatgacaagattaagaaggatgtgcgtcagctg
aaggggattcctgttctggtggggcttctggaccaccccaaatctgaagtccaccgcaag
gcttgtggtgccctgcgcaacatttcctacggcaaggacaatgacaacaaggtggccatc
aggaactgcgatggcatcccggccctcgtccgcctgctgagaaagaccaatgacatggaa
gttcgagagctcatcaccggaaccctgtggaatctctcgtcctatgaacctctgaaaatg
gtgatcatcaaccacggcctgcagaccatgaccaatgaggtcattatcccccattcgggt
tgggagcatgagccaaacgaggactcaaagccccgtgacgcagagtggactaccgtcttt
aagaacacatctggctgcctcagaaacgtgagctcagacggggcagaggctcggcgcaga
ctgagggaatgtgagggattagtggacgccttgctgcacgctctccaatcagctgtaggg
aagaaagacatggacaacaagtctgtggagaactgtgtttgtattatgagaaacctgtcc
taccacgtccacaaagaggtgccgggggctgaaaagttccaggacccgtcagcactacag
gcccctgggtcaggaggaccacagaggaagaaaaaggatgacgcaggctgctttggaggc
aagaaggctaaagaggaatggtttaatcaaggcagaaaaaacggtgagaatgacaaaaac
tacgacacgttggatctgcccaagcgcgcagagccatcgaaaggctttgagctgctgtat
cagcccgaagtggtgaggctctacctatctctgctgacggagagccagaactacaacacc
ctggaggccgctgccggggccctgcaaaacctcagcgctggacagtggacctggtccaac
tacatccgagccacagtgcgtaaggagaagggtcttcccatcctggtggagctgctgcgc
tccgactctgacaaggtggtccgagctgtggccatcgccctgcgcaacctgtctatcgac
cgccgcaacaaggacctgatcggaagttatgccatgcgggacttggtgagcaacctgcca
agtggccagcagcggccagccaaaaacctggaggaggacactgtggtcgccatcctcaac
accatccatgagattgtcactgacagctctgaaaacgctcgttccctcatccaggctcag
gccattgagaagctggtcgccatcaacagaaccagccaatcagctcgtgaaacgaaggca
gcgtcccacgtgctgcagacggtctggagttataaggagttgaggaatgctttgaccaag
gacggctggaacaagagccacttccagcccacggtgacaaccaccccgaaggcaaccaag
aatggcaagccaggctacgacgacaccactcttcccctcatggagaagaaccaaggcacc
aggaaatgtggcagtggtgatatgatacctatggatgagctgggtccagatggttactcc
accattgaccagagggacaaggactgcaaatacaagacaggcgatggctcagtggatctg
acagaacgggagccattaaagaatgacacaaataggaaacactatataaggagtaacagg
cctgcggtcagtctggtggacgcttgtgatgttaaaccccagcctgttgactcctgggtc
taa
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