Larimichthys crocea (large yellow croaker): 104920987
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Entry
104920987 CDS
T04659
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00310
Lysine degradation
lco00514
Other types of O-glycan biosynthesis
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104920987
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104920987
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104920987
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
104920987
Glycosyltransferases [BR:
lco01003
]
O-Glycan biosynthesis
O-linked Gal type
104920987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
104920987
NCBI-ProteinID:
XP_010731705
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Position
XII:18320767..18326148
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AA seq
620 aa
AA seq
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MPLGFVGFRLYFLVLAGKFFLHSNTEELPADHLLQPTQQESSLLKPTVLITILARNAQHS
LPYFLGCIDRLDYPKDRIAIWAASDHSVDNSTAMLQEWLRGVQHLYHSVEWRPAEQPSSY
DDEQGPKHWPDSRFIHVMKLKQAALRAARRLWTDYILFVDSDNLLTNRQVLSDMIAENLT
IVAPMLESKDLYSNFWCGMTPEGYYRRTPVYIPIRKWKRHGCFAVPMVHSTYLLDLRRRA
SQALAFHPLHPDYPHSVDDIMVFAFSAQQAGVQMYVCNKDHYGYLPVPLNQDQTLEEEEE
SFTHTLTEALISYTVEPSQYVHTVPKEPAKLGFDEIFLINLKRRSDRRERMLSTLSVLGI
HVTLTEAVDGKALNSSQLQAMGIDMLPGYKDPYSGRVLTRGEIGCFLSHYNIWKQVVQQE
LQQVLVLEDDVRFEPRFCRRLMTIMENVQSVGLEWDLIYVGRKRLQVKEPEYWVKGVSNL
VHPHYSYWTLGYVLSLNGAKKLLQAKPLNKMLPVDEFLPIMFNKHPNDEYMQYFEQRDLS
AFSVEPLLLFPTHYTGQPGYFSDTETSTIWDDEAVGTDWDRDGAKRQQVQKTENVGFKPV
APNSAYGGIPQLSASGRDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttggatttgttggattcagattatactttttggtcttagcaggaaagttcttc
ctgcacagcaacacagaggagctgccagctgatcatctcctccaaccaacccagcaggag
tcctctctactgaagcccacagtgctgatcactatcctggcacgcaacgctcaacacagc
ctcccttattttttaggatgcattgacagactggactatccaaaggaccgcatagccatc
tgggcagcctcagaccacagtgtggacaacagcacagccatgcttcaggagtggctcaga
ggagttcaacacttgtaccactcagtggagtggaggcccgcggagcaaccaagctcttat
gatgatgaacagggtcctaaacactggcctgactctcggttcatccatgtgatgaagtta
aagcaggcagcactcagagctgccaggcgtctttggactgactacatactgtttgtggac
agtgacaacttgctgacaaaccgtcaggtgctatcagacatgatagcagagaatctgaca
attgtggcacccatgttggaatcaaaagacctttattccaacttctggtgtggcatgact
cctgagggctactacagacgaactccagtgtatattcccattcgtaaatggaagcgtcat
ggttgctttgcagtccccatggtgcactccacatatctgctggacctgagacgcagagcc
agccaagcattggccttccaccctcttcaccccgactacccccacagtgtagatgacatc
atggtctttgctttctctgcacagcaagcaggagttcagatgtacgtgtgcaacaaggac
cattatggatatttacctgtgccccttaaccaagaccagacactggaggaagaagaggag
agttttacccacacactgacggaggcactcatttcctacacagtggagccatcacagtat
gtgcacactgtgcctaaagaaccagcaaagttgggatttgatgagatctttctgatcaat
ctgaagcgccggtcagaccggcgggaaaggatgctgagtactttgtctgtcctcggcatc
cacgtcacactgacagaagccgtggatggcaaagccttaaactcctctcagctgcaggcc
atgggtatagacatgctgcctgggtacaaagacccatattcaggccgtgtactaactaga
ggggagatcggctgcttcctcagccactacaacatctggaaacaagtggtgcagcaggaa
ctgcagcaggtgctcgtactggaggatgatgtgagatttgagcccagattctgcagaaga
ctgatgactattatggaaaatgtacagagtgtgggacttgaatgggatctcatttatgta
ggccgtaagcgtctgcaggtgaaggaaccggagtactgggtgaagggagtcagcaacctc
gtgcacccacactactcctactggacgttgggatacgtcctgtcgcttaatggggccaag
aagctgctgcaggcaaaacccttgaacaaaatgctgccggttgatgagttcctacctatc
atgttcaacaagcaccccaatgacgagtacatgcagtattttgagcagagggacctgagt
gcgttttcagtggagcctctgctgctctttcccacacactacactggccagccgggctac
ttcagcgacacagagacctctaccatctgggacgatgaggccgtgggcacagactgggat
agagatggagccaaacgccagcaggtgcagaaaactgagaatgtagggtttaaacctgtg
gctcctaattctgcctatggtggcatacctcaactctctgcaagtggaagagatgaactc
tga
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