Larimichthys crocea (large yellow croaker): 104921040
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Entry
104921040 CDS
T04659
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00061
Fatty acid biosynthesis
lco00071
Fatty acid degradation
lco01100
Metabolic pathways
lco01212
Fatty acid metabolism
lco03320
PPAR signaling pathway
lco04146
Peroxisome
lco04216
Ferroptosis
lco04920
Adipocytokine signaling pathway
Module
lco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
104921040
00071 Fatty acid degradation
104921040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104921040
09143 Cell growth and death
04216 Ferroptosis
104921040
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
104921040
03320 PPAR signaling pathway
104921040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lco01004
]
104921040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104921040
Enzymes [BR:
lco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
104921040
Lipid biosynthesis proteins [BR:
lco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
104921040
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of breast milk
104921040
Exosomal proteins of breast cancer cells
104921040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
104921040
NCBI-ProteinID:
XP_010731774
UniProt:
A0A6G0I8R0
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All DBs
Position
XXII:4515975..4548695
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AA seq
722 aa
AA seq
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MLAFVLVSGSLWIILELSSTLMEKMQAQEMMSGLRIPEMDELGQFFRSMPTSTLVGIGAL
TAVLAYWLATRPRPIKPPCSLLHQSEEVPHEDGGRRSMMGDSSKLLTHYHDDAKTMYEVF
QRGLHISGDGPCLGSRLPNQPYKWMSYKEVTARAEHLGSGLLHQGCQPNPNQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGPDAIRFIINTADISTVICDKVDKAQVLLDNVERK
ETPGLRRIILMDASDSALVEHGKVCGVHVQAMHEVEALGREHYRNPIPPVPDDLSIVCFT
SGTTGNPKGVMLTHGNVVADFSGFLKVTDKVISPNQDDCLISFLPLAHMFERLIESVVYC
HGGRIGFYQGDIRLLPDDMKALRPTIFPVVPRLLNRMYDKIFSQANSPLKRWLLNFAAKR
KGAEVSSGIIRSDSIWDKIFFSKIQASLGGRLRMIITGAAPTSPSVLGFLRAALGCQVYE
AYGQTECTAGCTFTTPGDWTPGHVGAPLPCNLIKLVDVPEKNYFASKGEGEVCVKGPNVF
KGYLKDPERTAETLDADGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIENI
YIRCQPVAQLYVHGDSLQSCLVGIVVPDPEVMPEWAKKKGIIGTYKDLCKNTELKKAILE
DLVRLGKASGLHSFEQVKNIYIHNEMFSIENGLLTPTLKAKRPELKEFFKGKIDQLYSSI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcattcgttttggtgtctgggtcgctctggattatattagagctgagttccacc
ctgatggaaaagatgcaggcccaggagatgatgagcggcctgaggataccggagatggat
gagcttggtcagttctttcgctccatgcctacttcaacgctggtgggaatcggcgctctg
accgccgtgctcgcgtattggttggctaccagaccccgccccatcaagccgccctgcagc
ctgctgcaccaatctgaggaggtgccgcatgaagatggaggtcgcaggtccatgatgggc
gacagctctaagctgctgactcattaccatgacgacgccaagaccatgtacgaggtcttc
cagagaggccttcacatatctggtgatggaccttgcttaggctcccggctccctaaccag
ccctacaaatggatgtcatacaaagaggtgacagcccgggctgagcatctgggttcaggc
cttctgcatcagggctgccagccaaacccaaaccagttcataggagtgttcgcccagaac
aggccagagtggatcatctcagaactagcttgctacacctactccatggtggtggttccc
ctttatgacacactgggcccagatgccatacggttcatcattaatactgctgatatctcc
acggtcatctgtgacaaagtagacaaagcgcaggtgctactggataatgtggagcggaag
gagactccgggactgcgaagaatcatcctgatggatgcctctgactccgccctcgtggag
cacggcaaggtctgcggcgtccatgtgcaggccatgcacgaagtcgaggctctgggcaga
gagcactacagaaaccctataccaccagtaccagatgacctttccattgtatgtttcacc
agtggaaccacaggaaacccgaagggagtcatgctcacccatgggaacgtggtggcagat
ttctcaggcttcctcaaagtgacagataaagtcatttcccccaaccaagatgattgcctc
atttccttcctgccactggctcacatgtttgagaggctcattgagtctgtggtgtactgc
catggaggacgaattgggttctatcagggcgatatccgtctcctcccagatgacatgaag
gccctgcggccaactattttccctgtggtgcctcgattgctcaaccgcatgtatgataag
atcttcagccaggctaacagtccgttgaagcgttggctgctcaactttgctgccaaaaga
aaaggtgctgaagtcagcagtgggatcattcgcagtgacagcatctgggacaaaatcttc
ttcagcaagattcaggccagcctgggagggaggttgaggatgattataacaggagcagct
cctacctcgcccagtgtcctgggattcctcagagcagctctgggatgccaggtgtacgag
gcatacggccagacagagtgcactgctggctgcaccttcaccacacctggagactggacc
ccaggtcatgtcggggccccacttccgtgtaacctcatcaaactggtggacgttcctgaa
aagaactactttgcctctaagggagagggagaggtttgtgtgaagggaccaaacgtgttt
aagggctacctcaaagacccggagaggacagctgagacactggatgcagacggctggctt
cacactggagatatcggcaaatggttacctaacggcacactgaagatcattgacaggaag
aagcacatcttcaagttggcgcagggcgagtacatctcccctgagaagattgagaacatc
tacattagatgtcaacctgtggcacagctctatgttcatggagacagcctgcagtcctgt
ttggtgggcattgtggttcctgaccctgaagtcatgcctgaatgggccaaaaagaaaggc
ataataggcacctacaaggacctctgtaaaaacactgaattaaagaaggcaatccttgaa
gatctggtgcgtcttggcaaggccagtggcctccactcatttgagcaggtgaagaatatc
tatatccacaacgagatgttctccattgaaaacggcctcctgacgccgacactaaaggcc
aagagaccggagctgaaggagttcttcaaggggaagattgaccagctctacagcagcatc
tccatgtga
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