Larimichthys crocea (large yellow croaker): 104921126
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Entry
104921126 CDS
T04659
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04142
Lysosome
lco04144
Endocytosis
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104921126
04142 Lysosome
104921126
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104921126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104921126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104921126
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104921126
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
104921126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
104921126
NCBI-ProteinID:
XP_010731878
LinkDB
All DBs
Position
VII:complement(11358128..11382865)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAVHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctatccgcttccaggagcacctgcagctccagaacctgggaatc
aacccagccaacattggattcagcactctaaccatggagtccgacaagttcatctgcata
agggagaaagtgggtgagcaggcccaggttgtcatcattgatatggccgaccccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatc
gcccttaaagcggcaaagaccctgcagattttcaacattgagatgaagagcaagatgaag
gctcacacgatgacagacgacgtgaccttctggaagtggatctccctcaacaccgtcgcc
ctggtcacagacaacgcagtctaccattggagcatggagggtgactctcagccaatcaaa
gtcttcgaccgtcactccagcctggcaggctgtcagatcatcaactaccgcactgacgct
aaacagaaatggttgctgctcattggcatttcagcacagcaaaaccgtgttgtcggagcc
atgcagctgtactcggtggacaggaaggtgtctcagcccatcgaggggcacgctgctggc
tttgcacagttcaagatggagggcaataccgaagagtcgactctgttctgctttgccgtg
cgaggacaggcaggaggaaaactgcacatcattgaagtggggactccaccaactgggaac
cagccatttccaaagaaagccgtggatgttttctttcctccagaagcccagaatgacttc
cctgtggccatgcagatcagttccaagcaagatgttgtctttctcatcactaaatatggc
tacatccacctgtatgacctggagactggaacttgtatctacatgaacaggatcagcgga
gagaccatttttgtcaccgcaccccatgagcctactgctggtatcattggtgtcaacagg
aaaggacaggtgttgtcagtgtgcgtggaagaggaaaacatcattccctacatcactaat
gtgctccagaatccagaccttgctctccgcatggctgtccgcaacaacctagcaggtgct
gaggagctgtttgcccgcaagttcaacaccctctttgcagcagggaattactcagaagct
gccaaggtggcagcgaacgctcccaagggtattctgcggaccccagacaccatccgtcgg
ttccagagtgttccagcccaaccaggccagacatctcccttgctccaatactttggcatc
ttgctggaccaaggccaactcaataagttcgagtctctggagctttgcaggcctgtgctc
cagcagggccgcaagcagctgctagaaaaatggttgaaagaggacaagctggagtgctct
gaggagcttggagacttggtgaagtctgtagatcctactcttgctctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgctttgcagagacaggacagttccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatcttcttgctaaggaat
gtaatgcggatcagtccagagcagggccttcagttctcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatccag
cagtgcacgtccttcctactagatgccctgaagaacaacagacccatggaaggaccattg
cagacacgcctgctggaaatgaatttggtccatgcaccacaggttgcagatgccatcctg
ggcaaccagatgttcacccactatgaccgcgctcatgtggcgcagctgtgtgagaaggct
ggtctcctgcagagggcgctggagcattatactgacctgtatgacataaagcgcgctgtg
gttcacacacaccttctcaacccagagtggttggtgaatttctttggctccttgtcagta
gaggactctctggagtgtctgagggccatgctgtctgcaaacatccgccagaacctgcag
atctgcgtccaggtcgcttccaagtaccacgagcagctcagcactcagtctctcactgag
ctttttgagtcattcaagagcttcgagggtttgttctacttcttgggttctattgtgaac
ttcagccaggatccagaggtccacttcaaatatatccaggccgcctgcaagacaggccag
atcaaagaggtggagagaatctgccgggagagtaactgctatgaccctgaacgtgtgaag
aacttcctgaaggaggccaagctgactgaccagctgcctttgattattgtgtgtgaccgc
tttgattttgtccacgacttggtcctgtacctgtaccgcaacagcctgcagaaatacatt
gagatctatgtacagaaggtgaaccccagccgtctgccggtagtcattggagggttactg
gatgtggattgtgcggaggatgtgattaagaacctgatcatggtggtgagggggcagttc
tccacagatgaactggtggctgaggtggagaaaagaaatcgattgaagctgctgctgccc
tggttggaggctcgtattcatgaaggttgcgaggagcctgctacccacaacgccctggcc
aagatctacatcgacagcaacaacaacccagagcgcttccttagggagaacccctactac
gacagccgcgtggtgggcaagtattgtgagaaaagagacccccacttggcctgcgtcgcc
tatgaaagaggacagtgtgaccaggagctgattcatgtgtgcaacgagaattcactgttc
aagagtctgtctcgctaccttgtacgtcgcaagaaccctgagctgtgggcgagcgtgctg
ctggagaccaacaattacagaagaccactcatcgaccaggttgtccagacagccttgtct
gagactcaggatccagaggaggtgtctgttacagtcaaggccttcatgactgcagacctc
cccaatgagctcatcgaacttctggagaaaattgtcctggataactctgtctttagcgaa
cacagaaacctccagaatctgctcatcctgacagccattaaagctgatcggacacgtgtt
atggagtacatcaaccgtctggacaattacgatgccccagacattgccaacatcgctatc
agcaatgagttgtttgaggaagcctttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggtgctgattgagcacattggtaacctggacagagcttatgagtttgctgaa
cgctgcaatgagccaccagtgtggagccagctggccaaggcccagctccagaagggcctg
gtcaaagaagccattgactcttacatcaaggctgatgacccctctgcttacatggaggtg
ggacaggctgcagcccagagtggaaactgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggcccgggagtcgtacgttgaaacagagttgatctttgctctggccaagacc
aaccgcctggctgagctggaagagttcattaacggacccaataatgctcacattcagcaa
gtgggtgaccgttgctatgacgacaagatgtacgaggcagccaagctgctttacaacaac
gtgtccaatttcggccgcctggcctccactctcgtgcacctgggagagtatcaggctgct
gtggatggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcgtgc
gtagatgggaaagagttccgccttgcccaaatgtgtggcctgcatattgttgtccatgcc
gacgaactggaggaactcatcaactactaccaggatcgtggttactttgaggagctgatc
accatgttggaggccgccttgggattggagcgtgcccacatgggtatgttcaccgagctg
gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tcccgtgtcaacattcctaaggttctcagggcagcagaacaggctcacctctgggcagag
ctggtgttcctctacgacaagtacgaggagtatgacaacgccatcatcactatgatgaac
cacccatctgatgcctggaaggaaggccagttcaaagacatcgtaaccaaggtggcgaat
gtggagctgtactacaaggccgtccacttttatctggagttcaaaccgttattactgaac
gacctgctcattgtcctgtctccaagactggaccacacacgcgctgtcaacttcttcagc
aaggtgaaacagcttcctctggttaagccttacctaaggtctgtccagaatcacaacaac
aagtcagtaaacgaggcactcaacaacctcttcatcattgaggaggactatgcggcgctg
cgcacttccatcgacgcctatgacaactttgacaacatctcactggcccaaggcctggaa
aagcacgagttgattgagttcaggaggattgcagcctaccttttcaagggcaacaaccgc
tggaaacagagtgtcgagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatccgagtccaaagacatcgagctggcagaggaactcctggcttggttcctgaacgaa
gacaagaaggagtgttttgcagcttgcctattcacctgctatgacctgctgcggcctgat
gtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccgtactttatc
caagtcatgagggagtacctctctaaggttgatgcgataaaggaaaaggttgacaaactc
gaagcctccgagtctctgaggaaacaggaggagcaggctactgagtcccaacccattgtt
tacggcacaccacagctcatgctcacagcagggcccaacgtggccgtgcctcctcagcag
ccctacggctacggctacacagcagcaccaggctacggccagccgccacagcccagcttc
ggttatggcatgtga
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integrated database retrieval system
