Larimichthys crocea (large yellow croaker): 104921185
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Entry
104921185 CDS
T04659
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
lco04517
IgSF CAM signaling
lco04530
Tight junction
lco04810
Regulation of actin cytoskeleton
lco05100
Bacterial invasion of epithelial cells
lco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104921185
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104921185
09144 Cellular community - eukaryotes
04530 Tight junction
104921185
09142 Cell motility
04810 Regulation of actin cytoskeleton
104921185
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104921185
05100 Bacterial invasion of epithelial cells
104921185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104921185
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104921185
Membrane trafficking [BR:
lco04131
]
Others
Actin-binding proteins
Arp2/3 complex
104921185
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
104921185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
EIF3I
Beta-prop_HPS5
Rax2
Beta-prop_EML
RMC1_N
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
104921185
NCBI-ProteinID:
XP_010731948
LinkDB
All DBs
Position
X:25654894..25663022
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGGALTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgctggagcccatcacctgccacgcgtggaaccgcgacagg
acacaaatcgccatcagtcctaacaaccacgaagtccatatctacaagaagagtggcaac
cagtgggttaagacccatgagctgaaggagcacaatggacacataacaggtatcgactgg
gctcccaaaagcgaccgcatagtgacatgcggagcggaccggaatgcctatgtgtggtcg
cagaaggagggggtatggaagcccacgctggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtctccgctggagaacaagtttgccgtcggtagtggtgctcgactcatc
tcggtctgctactttgagtctgagaatgactggtgggtgagcaagcacatcaagaagcca
atccgctccaccatcctcagtctggactggcatcccaacaacatcctgctggctgctgga
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggtcccacaccctggggcagcaagatgccatttggggctgtgctagcagaatttggagga
gcaggtggagggggttgggtccactcagtctctttctcagcctctggtaaccgcctggcc
tgggtcagccatgacagcactgtcactgtggtggacagctctaagactgccagtccctcg
cagctgaagacggagttccttcctctcctcagtgtcatttttgtttcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgtgacgatggtggagcgctg
acattcgtgtcaaagctcgacctccccaagcagagtatccagaggaacatttctgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacactgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgagggagacaaaagggactgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatatgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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