Larimichthys crocea (large yellow croaker): 104921224
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Entry
104921224 CDS
T04659
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104921224 (tfip11)
Spliceosome [BR:
lco03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104921224 (tfip11)
Other components
Complex C specific factors
104921224 (tfip11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104921224
NCBI-ProteinID:
XP_010731992
UniProt:
A0A6G0IL30
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Position
III:complement(27882820..27887712)
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AA seq
838 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEIESFEVTEWDLANEFNPDRRRHRQTKEQATYGIWADRDSDED
ERPSFGGKKSKDYTAPVNFVSGGLRKTAAEEKQHQQKGEEGSDDSDDDSPSAPPPSRSTA
PKKLQMGTFRGSQSQRFAGGIQTGKGIGNWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
VNPIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGPGGK
KKPKYSYRTVDELKAKGKLAGRSIAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
DEGPPSLSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRA
LQSRLNAEQDSIQRMEAVLALVERFPSGEMAPGEGPTLQECARIFETLQTDYYEEYKSMG
LADLAVAVVQPLLKEKLRSWDPLKDSSYCLEDIGQWRAILESRDLHSSGPDSNMDPYHRL
LWEVWIPVMRSCVSSWQPCIVGPMVDCVDVWAPLVPLWILDHLLEQLILPRLQREVDSWN
PLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPNDTSARLILEPWKDVFT
PGAWEAFMVKNIIPKLGTSLTLCLDELVINPLQQQMEPFHWVMDWEGMLSPSSLVSLLDK
NFFTKWLQVLCSWLSNSPNYEEITKWYLFWKSMFSDLLLAQPLIKEKFNEALDIMNRAVS
SGIGGYMQPGARENIAYLTQTERRRDFQYEAMQERRDAESVAHRGISAGVPTNFKDLIQT
KAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcccatctgtatgggaggagagaagaggaggaggaaggtgtggagatcgag
agctttgaggtgacagagtgggacctggccaatgagttcaacccagaccgccgcagacac
aggcagaccaaggagcaggccacctatggcatctgggctgacagggactcggatgaggat
gagaggcccagctttggaggcaagaaatctaaagactacactgctccggtgaactttgtc
agtggtggtttgcgtaagaccgcagctgaggagaaacagcaccagcaaaaaggagaagaa
ggctctgatgactctgatgatgatagtccttcagcacctcccccctctcgtagcaccgca
cccaaaaaacttcagatgggtactttccgggggagccagtcccagaggtttgcaggcggc
atacagactggtaaaggtattggtaattgggagaagcacacaaaaggaattggacagaaa
cttctgcagaaaatgggctaccaaccaggcaaaggcctgggaaaaaatgctcagggtatt
gtgaaccctattgaggcaaaggttcgtaaaggcaagggagcagtgggtgcttatggcaat
gaacgaacccagcagagtcttcaagattttcctgtggtcgactcagaggaagaggaggaa
aaggagtttcagaaggagttaggccagtggcgtaaggatcctgccggccctggagggaag
aagaaacccaagtactcctacagaactgtagacgagctgaaggctaaaggaaagttagca
gggcgcagtatagcagcatccgctggagagttggcacaggtcaaggtaatagatatgact
ggaagagagcaaaaagtgtattacagttacagtcagatgtccaacaagcacagcgttcca
gatgaaggaccaccaagcctgtccactcaggatcagaagggatctggctttgctctccct
gaactcgaacataacctgcagctcctgatagaccttacagaacaggacatattacagtct
gccagacgtctgcagcatgaaaaagatgttgttgtgtctctgagccatgagtcacgagcg
ctacagagcagactgaatgcagaacaagactccattcagagaatggaggccgttttggca
ttggtggagcgttttccttctggagagatggcaccaggggagggacccaccctgcaggag
tgtgcccggatctttgagactttacaaacagactattatgaagaatacaagtcgatggga
ttagcagatttggctgtagctgttgttcagccgttactcaaagagaaacttcgttcttgg
gaccccctgaaggatagctcttattgtctggaagacatcggtcagtggagagcaatcctt
gaatcgagagacctccactccagtggcccagattcaaacatggacccttaccacagactg
ttgtgggaagtgtggatcccagtgatgcggtcctgtgtgtccagctggcagccttgtatt
gtagggccaatggtggattgtgtcgatgtgtgggctcctcttgtcccactgtggatcctg
gatcacctgttggagcagctgattttaccccggctacagcgagaggtggatagctggaac
cctttaactgacacagtgcccatccactcctggatccacccttggctgcctctgctccaa
tcacgtctggagcctctttacccaccaatcaggagcaaactatccaatgccttgcagcgg
tggcatcccaatgacacctcagcccgcctcatcctggagccgtggaaggacgttttcaca
ccaggtgcatgggaggccttcatggtgaaaaacatcatccctaaactcggtacttcatta
actctgtgtctggacgagttggttatcaaccctctccagcagcagatggagccatttcac
tgggtgatggactgggagggcatgttgtccccctccagccttgtgtccctgctggacaaa
aacttctttacaaagtggttgcaggtcctttgttcatggttgagcaacagtcctaactat
gaggaaatcactaaatggtacctgttttggaaaagcatgttcagtgatctcctgttggca
cagccgctcattaaagagaagtttaatgaagctttagacatcatgaaccgtgcagtgtcc
tcaggcataggtggatatatgcaacctggtgcgagggagaacattgcatatctaacacag
accgagagacgaagggacttccagtacgaagcgatgcaggagcggagagatgccgagagt
gtggctcacagaggcattagcgctggcgtgccgactaacttcaaagatcttattcagacc
aaggcagaggagaacaacatcgtctttatgcccttagtggccaaacgccacgagggcaaa
cagctgtacacattcgggcgtattgtcatctacatagatagaggggttgtgtttgtgcaa
ggagagaagacttgggtgcccacgtctctgcagagtctgatagatatggccaagtaa
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