Larimichthys crocea (large yellow croaker): 104921279
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Entry
104921279 CDS
T04659
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104921279
Enzymes [BR:
lco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
104921279
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104921279
Prokaryotic type
104921279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
104921279
NCBI-ProteinID:
XP_010732065
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All DBs
Position
XII:complement(18598468..18603176)
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AA seq
545 aa
AA seq
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MLCCIWRRSSYSSAPRTLSRPTSAFSCLTKSFTTQNIMSDKKRKPTSAAAAAKGSSAKLQ
KLTPMKEKAGGWLQDLMKQQRTEKKDVKFNKKRLRVISDTEKIKQGSEGVLYWMSRDHRV
QDNWALIHAQQLAVEENLPLHVCVCLLVPKSELSTLRHYSFMLKGLEEVAKECKALDIQF
HLLHGAAGDVLPGFVSDRSLGAVVTDFSPLRERLQWLEDVKKKLPKDIPILQVDAHNVVP
CWEASPKLEYAARTIRGKITKLLPEFLTDFPLVEKHPYTATRTAKPVDWEKNQASLDVDR
TVREPEWAKPGTKAGVVMLESFIDVRLKLFETQRNDPNAAALSQLSPWIRFGHLSAQRVA
LQVQRSGKNAGQSVSSFIEELVVRRELTDNFCFYNKKYDSVEGAYEWAQKTLKDHAKDER
PYIYTREQLEKAKTHDKLWNAAQYQMLTEGKMHGFIRMYWAKKILEWTSSPEEALSIALY
LNDRYSLDGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNYKGCLRKFDVAQFEQKY
CPKNI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctgcatttggaggcgctcatcttattcctctgcaccaaggacattgtcgagg
cccacctcagcattctcctgcctgactaaatcattcaccactcaaaacatcatgtctgac
aaaaaacgcaagccaacttctgctgctgctgctgctaaagggtccagtgccaagctgcaa
aagttgacccccatgaaggagaaagctggtggctggctgcaggacctcatgaagcagcag
aggacagagaagaaggacgtgaaattcaacaaaaagcgcctccgtgttatatctgacaca
gaaaagataaagcagggctcagagggtgtcttgtactggatgtcaagagatcacagagta
caagataattgggcactgatccatgctcagcagctcgctgtggaggagaaccttcctctg
cacgtctgtgtctgcctgcttgtcccaaagtcagagctgtccacactgagacattacagc
ttcatgctgaaaggtctggaagaagttgcaaaggaatgtaaagccttagacatccagttc
catctgctgcatggtgcagcaggagacgtcctccctggttttgtgtcagaccgcagcctg
ggggccgtggtgacggacttctcccccctcagagagcgactgcagtggttggaggacgtt
aaaaagaagcttccaaaggacattcccatcctacaggttgatgcccacaatgttgttccc
tgctgggaagcttcacctaaacttgagtacgctgccaggaccatcagaggaaaaatcacc
aaacttttgccagagttcctgactgattttcctcttgtagagaaacacccttacacagca
acaagaactgccaaaccagtagactgggaaaaaaatcaagcctccctggacgttgacaga
acagtcagagagccagagtgggctaaaccgggcaccaaggcaggagtggtaatgttggag
tccttcatcgatgtacgccttaaactgtttgaaacccaacgcaacgatccaaacgccgca
gcactcagccagctctccccctggatccgctttggccacttgtcagcccagcgggtggcg
ctgcaagttcagcgcagtgggaagaatgctggtcagtccgtctcctccttcatagaggag
ctggtggtgcgcagggagctgactgacaacttctgcttctacaacaagaaatatgacagc
gtagagggtgcgtacgagtgggctcagaagactttgaaagatcacgctaaagacgagagg
ccctatatctacacacgtgaacagctggagaaagcaaaaacacacgacaaactgtggaac
gctgctcagtaccagatgctcacagaggggaagatgcacggtttcataaggatgtactgg
gccaaaaagatcctggagtggacttcatcacctgaggaggcgctctcaatcgctctgtac
ctaaacgatcgctattcgctggatggccaggaccctaatggctttgtcggttgtatgtgg
tctatttgcggtatccatgaccagggctgggcggagagacctgtttttggaaagatccgc
tacatgaactacaaaggctgccttcggaagtttgacgtggcccagtttgagcaaaagtac
tgtcctaaaaacatttaa
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