Larimichthys crocea (large yellow croaker): 104921311
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Entry
104921311 CDS
T04659
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104921311 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104921311 (sec24d)
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104921311 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
104921311
NCBI-ProteinID:
XP_019121393
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All DBs
Position
III:complement(8191971..8208222)
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AA seq
1068 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGPGPAQPLYGHYGGPPQRMPAPPTALMKSPVSSA
AGMPPPPVSSQYNPNVQQNGAHPQRYPAAPAVSAAYGQPLQSPYNSMASTAPPPTQQLTN
QMTAMNLGNYAPSPTSSVMQQPFQTSPPPAMGQLQMSPGQQSPHMSPQMSPPLSPPATMP
MGGPPMGGQPMAGQPMAGQMMAGPPMAGQPMAGPPMAGQTMAGPPMAGMGGRPFPGSPPP
GPGGFQQPGPGPVGPPGYPQQAGQFGGQMVGPQPGMPGGFPAGPGGMAGPPQKKLDPDSI
PSTTQVIEDDQAKHGGHVYNTNIRGQVPPLVTTDFSVNDQGNASPRFMRCTTYSLPCTAD
LAKQCQVPLASIIKPFANLPKNETPLYVVNHGETGPIRCNRCKAYMCPYMQFIDGGRRYQ
CGFCNCVNEVPVFYFQHLDHMGRRVDFYERPELSLGSYEFVATMEYCKNNKPPNPPAYIF
MIDVSYNNIKSGLVKLICDELKTLLENLPREDGMESSAIKVGFVTYNKVLHFYNVKSALA
QPQMMVVSDTAEMFVPLLDGFLVNYQESRAVITNLLDQIPDMFADTNESETVFAPVIQAG
VEAFKAAECSGKLFIFHSSMPTAEAPGKLKNRDDKKLVSTEKEKTLFQPQKGVYEQLSKD
CVAQGCSVDLFLFPSQYVDLATMGDVPSHTGGSVYKYNNFQVEADGEHFLRDLRKDVQKS
IGFDAIMRVRTSTGFRATDFFGAIHMNNTTDIEMAAVDCDSAVTVELKHDDTLSEETGAL
MQCALLYTTINGQRRLRIHNLSLNCSSQLSELYKSCETDSLINFFAKSAYRAILNQPLKN
VREILVNQTAHMLACYRKNCASPSAASQLILPDAMKVFPVYMNSLMKTAPLVGSTELSTD
ERAHQRLSVMAMGVEATQLLLYPRLIPLHNMDVNSEALPAPLRCSEERLADSGMFLLENG
HSMFLWLGQASPPDLIQSIFNLPSLAHLQGHMCALPELDNPLSKKVRSIINGLLEKRPNS
MKLQIVRQKDKPEMLFRQFLVEDKGLHGGASYMDFLCYVHREIRQLLT
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttgctgcaccgccatactcccaggcccagccagggatgggg
ggctaccaaggtggatttgggcctggtcctgcacagcccctctacgggcactacggggga
ccacctcagcgaatgcccgctccaccaacggctctgatgaaatccccagtttcctctgct
gctggcatgcctccaccaccggtgtccagtcagtacaatccaaatgtccagcagaatggt
gcacaccctcaaagataccctgctgcaccagctgtttctgccgcttatggacaacctttg
cagtccccatataatagcatggcctctacggctccacctccaacacagcagctcaccaat
cagatgactgctatgaacttgggcaactatgccccttctccaacaagctccgtaatgcag
cagcctttccaaacatcccctcctccagcaatgggccagctacagatgtctccaggccag
cagtccccccacatgtccccccagatgtctccaccactgtcacctccagcaaccatgcca
atgggaggcccccctatgggaggccaaccaatggcaggccaaccaatggcaggccaaatg
atggcaggcccacctatggcaggccaaccaatggcaggtccacctatggcaggccaaaca
atggccggcccaccaatggcaggcatgggtggcagaccattcccaggatcacctcctcca
ggccctggaggtttccagcagcccggtcccggacctgttggtccaccgggatatccacag
caagcaggtcagtttgggggacagatggttgggccacagccaggcatgccagggggcttc
cctgcaggaccaggcggaatggcagggccacctcagaagaaactggaccctgactctatc
cccagcacgactcaagtgattgaggacgaccaagcaaaacatggggggcatgtctacaac
acaaacatcagaggacaggtcccacctctggtcaccactgacttttcagtaaacgaccaa
ggcaatgccagtcccaggttcatgcgctgcaccacctactcgctaccctgcaccgctgat
ctggccaaacagtgtcaagtgcccctggcttccatcattaagccatttgccaatttgcca
aagaatgagactcctctatatgtcgtcaaccacggtgagacaggtccgatccgctgcaat
cgatgcaaggcctacatgtgtccctacatgcagtttattgatggaggccgtcgctaccag
tgtggcttctgcaactgtgtcaacgaagtgccagtcttctatttccaacatcttgaccac
atgggccgtagggtggacttctacgagaggcctgagctgtccctggggtcctacgagttt
gtagccaccatggaatactgcaagaacaacaagccgccaaaccctcccgcctacatcttt
atgattgatgtgtcctacaacaacattaaaagtgggctggtcaaactgatatgtgatgag
ctgaagactctgctggagaacctgcccagagaggatggcatggagagctctgcgattaag
gttggatttgtcacctacaacaaggtcctccacttctacaacgttaagagcgctctggcc
cagccccagatgatggtggtttcagatacagctgagatgtttgtgccactccttgatggc
ttcctcgtcaactaccaggaatcgagagccgttatcaccaacctcctggaccagatccct
gatatgtttgcagacaccaacgagagcgaaacggtctttgcccctgtcatccaggccggc
gtggaggcattcaaggcagcagaatgcagcggaaagctcttcatcttccactcctccatg
cccactgctgaggctcctggcaaactgaagaacagggatgacaaaaagctggtcagcacc
gagaaagagaaaactctgttccagcctcagaaaggagtgtacgagcagctgtctaaggac
tgtgtggcacagggctgcagtgtggatctcttcctcttccccagccaatacgtggacttg
gcaaccatgggcgatgtgccctcgcacaccggaggctccgtctacaagtacaacaacttc
caggtggaggccgacggggagcatttcctgagagacctgcggaaagacgtgcagaagagc
atcggattcgatgccatcatgcgcgttcgtaccagcacaggcttcagagctacagacttc
ttcggtgccatccatatgaacaacaccacagacatagagatggcagctgtggactgcgac
agcgctgtgaccgtagagctgaagcacgacgacacactcagtgaagagaccggggcactc
atgcagtgcgccttgctgtacaccaccatcaacgggcagcgacgtctccgcatccacaac
ctcagtctgaactgcagctcgcagttgtcggagctgtacaagagctgcgagaccgactca
ctcatcaacttctttgccaaatcagcttaccgtgccatactgaaccagcctctgaagaat
gtgagggagatcctggtcaaccagacagctcacatgttggcctgctacaggaagaactgc
gccagcccctccgctgccagccagctgatcctgcctgatgccatgaaagtctttccagtc
tacatgaacagcctcatgaaaacggcgcccttggttggcagcacagagctctcgacggac
gaaagagcccatcaaaggctgtcggtcatggccatgggggtggaggccacacagctgctc
ctctacccacgcctcatcccactgcacaacatggatgtcaacagcgaggccctgcctgct
ccgctgcgttgttcggaggagcgtctggcagactccggcatgttcctgctggagaacggc
cactccatgtttctgtggctcggccaagcgagcccgcccgacctcatccagagcatcttt
aacctgccttccctcgcccacctgcaaggacacatgtgtgccctgccggagctggacaac
ccgttgtcaaagaaggtccgatccattatcaacggcctgcttgaaaagaggccgaactcc
atgaagctccaaattgtgaggcagaaggacaaaccggagatgttgttccgtcaattcctg
gtggaggataagggcttgcacggtggagcctcctacatggacttcctttgctatgttcac
cgagagatcaggcagctgctcacttaa
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