Larimichthys crocea (large yellow croaker): 104921426
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Entry
104921426 CDS
T04659
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104921426 (ubr1)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104921426 (ubr1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
104921426 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
104921426
NCBI-ProteinID:
XP_027130719
LinkDB
All DBs
Position
XXIV:11489932..11507171
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AA seq
1742 aa
AA seq
DB search
MAEGEKTVDGLELNKEWLEAADSRAELLCYLKEQVPQIFCLETESCPQNQEELIQSRLLH
PLECFLFGEDPQEGLEKLKQGCSSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGAATAMVTDECSLEPELYERAEK
LFQVLLHYVTEFLVWEENLELSAELQPRTKDDAYYCVLYNDEHHSYDHVIYTLQRSVNCN
EAEAQTHTALIDKEGRRAVKKGTLRSCQQAKELIKSNSEHISMQALRVEILHATVMAHQT
FALRLGSWFQKIISYSVGFRQAFCQVALESNTDRDRPCLISRLMLHDARMFKGARKIVHE
LIFCSMLMETEFKRLFAIEFTKHFKQLQKDFINDDHERSISITALSVQIFTVPTLARQLI
EQVNVIKVIVETVMELLCEHLDVNHRFYFLGYNSDKFTRIQVIFHDLRYILISKPSVWTE
ELRTQFMEGFKVFLGLLKCMQGMEEVKRQFGKHIAVEPEWEAGFTLQIQLRHILAMFQDW
CSSDDEILLLAYKECHKVLMQCNNQPFHREPADYYMCKHILHVRPYKVSQQPVSIHLPIS
RLLAGLYVLLCRTGAIARLDNPESYDHTQLAEQPLRCVVLAAQVSAEMWRRNGLSLVSQV
YYYQDVKCRDEMYDKDVLMLQIAASKMDPNHFLMLILLRFELFDYFNGSCSSKDQDELIQ
WNRLTEEMLYLLIVIIGERYVPGISQLTKEDVTMREVIHLLCIEPMAHSSLVKGLPENES
HETGLENVITKVATFKKPGVSGHGLYEVKKERLAEFNPFFYHYSRSQHSKAEESQKKRKI
QEGSDKALCPPVPPAFCPAFSSIVRLLCCDIIIHVLRRVLQKAAEDQATHWTEAMIQRAL
HLIGQALLEEKTQLEDSTVEDVTFDFSLKARKIGSEHGKSVFLLLSKIKAVPSLEAQKDM
IKWVLQMFEIVKCLREKSSPTASMSMEATKPEESAQDKEKAERKRKAEAAKLHRQKIMAQ
MSAMQKNFIESNKMLYDNMPESGAQGEPDTATESCAMEQMELCVAIGPHRGSTPAEREVL
TCILCQEEQEVAGQAQAMVLTACVQRSTVLTQCRGKIPTNNADGTGTYPLFMPPELAVGT
HTGSCGHVMHSTCWQKYFEAVQNTTRNRLHADMIIDLENGEYLCPLCKSLCNTVVPLIPL
EPLMFNYENAEIIGPHLTLPRWIQIISARIKGLKSVNQDNDCNAECSSAEGDMGLCGEGQ
PDFRSILSYGVQEPRKFSDSIVEMLVVCATTVHRVGLQTAPNELCPRVPLMAWNTCAFTI
QAIENILHEEDKPLFGSLQNRQLAGLKAIVQFAAAQRLKSSQAVIQRHFTDMLGVLLPVV
SRKNTPSVLEVDFFHLLVGLVLSIPSLYQEEAVDLQPSAVSSAYNHLHILHLVTMAHVLQ
ILLTSTDFPAVACGEETEEARAAAELCTTVSQCTGRLIPDVSGSSVAERVKRGIEPFLRC
AALFFSCLTGVHPPEELFGTTVTSQAQMEALCSYLALPSNVFQLFQEHRNSVTPLLQRWC
GSPAAAVTKALKGKIQTVRYPRRRNRLIELPEDYSALLNQASHFQCPKSSDDERKHPTLC
LFCGAMLCSQSSCCLSQLDGEDVGACTAHAATCGAGVGMFLRVRECEIVLMASKTRGSTY
AAPYLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSLEVVSVVFAFEWQ
ML
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcgagaaaacggtagacggactggagctgaataaggaatggctggaggct
gcagacagcagggcggagctgctctgctacctgaaggagcaggtgccacagatcttttgc
ctggagacggagtcctgccctcagaatcaagaggagctcattcagagccggcttctccac
cctctggagtgtttcctgttcggagaggatcctcaggagggactggagaagctcaagcag
ggatgcagctcctcccagctctgtggacgtgtcttcaaagagggagagactgtctactcc
tgcagggattgcgcaatagatcccacttgtgtcctgtgcatggactgcttccaggatagc
gtgcacaaaagtcatcgttacaagatgcacgcgtcatcaggcgggggattctgtgattgt
ggggacgtagaagcctggaagatcggcccctgttgctccaaacacgacccaggggcagcc
actgccatggtaacggatgagtgttctttggagcctgagttatatgagcgtgctgagaaa
ctgttccaggtactgctgcactacgtcacagagttcttggtgtgggaggagaacttggag
ctatcggctgaactgcagccccggacaaaagatgatgcatactactgtgtgctgtacaat
gatgagcaccactcgtacgaccatgtgatttacaccctgcagcgctcggtcaactgtaat
gaagctgaagcacagacacacacagcacttattgataaagagggtcgacgggcagtaaag
aagggaacgcttcgttcctgccagcaagcaaaggagctcatcaagtccaactccgagcac
atttccatgcaggcgctacgcgtggagatccttcacgcaacggtaatggctcatcaaact
ttcgctctgcgccttggctcctggttccaaaagatcatcagttattcagtgggcttcaga
caggctttctgtcaggtggcgctagagagcaacacagacagagaccggccttgcctcatc
agcagactcatgctgcacgatgctcggatgttcaaaggagctcggaagatagtacatgaa
ctgattttctgtagcatgctgatggagacagagttcaaaaggctttttgcaattgaattt
acaaagcactttaagcagctgcagaaggacttcataaatgatgaccatgagaggagtata
tccatcactgctctgtctgttcagatattcactgtacccacattggccagacagctgatc
gaacaggtcaatgtcataaaagtgatagttgagacagtcatggaattgctgtgtgaacat
ctggatgtcaaccatcgcttctacttccttggctacaactcagacaagttcacacggatc
caggtcatcttccatgatctcagatatattctgatcagtaaaccatcagtctggactgaa
gagctgcggacacagttcatggaggggttcaaagtgtttcttgggcttctcaaatgcatg
cagggcatggaggaggtgaagcgccagtttggtaaacacatcgcagtggagccagaatgg
gaagctggctttactcttcagatccagctccgccacattcttgctatgtttcaggactgg
tgttcctctgatgatgagatcttgctgcttgcatataaagagtgccacaaagtcctgatg
cagtgcaataaccagcccttccatagggaacccgccgactactacatgtgcaagcacatc
ctccatgttcgtccgtacaaagtgtctcagcagcctgtcagcatacatctgcccatctcc
agactactggctggcctgtacgtacttctgtgcagaacaggggcaattgcacgtctggat
aatcctgagagctatgaccacacccagctggcagagcagcctctgcgctgtgtggttctg
gctgcacaggtctccgctgaaatgtggcggagaaacgggctctcactagtcagccaggtc
tactactatcaggatgtaaaatgcagggacgagatgtacgataaggacgttctcatgctt
cagatagctgcttccaaaatggatcccaaccatttcctcatgctgatcttgttgagattt
gagctttttgattatttcaatgggagttgttcgagcaaagaccaggatgaactgatacag
tggaaccgtttgacggaagagatgctctacctccttatcgtcatcattggtgagcgctat
gtccccggtatcagtcagctgaccaaggaggatgtgacaatgcgagaggttatccacctc
ttgtgcattgagcccatggctcatagtagcctggtcaagggtctgccagagaacgagagc
catgaaacaggcctggagaatgtaattaccaaagttgcaaccttcaaaaaaccaggagtt
tcgggccatggattgtatgaagtaaaaaaagagcgtctggcagagttcaaccctttcttc
tatcattattcaagatctcagcacagcaaggcagaagagtctcagaagaagaggaagatt
caggagggcagtgataaagctctgtgtcctccggtgcccccagccttctgcccggcattt
tccagcatagtccgtctgctctgctgtgacattatcatccacgtcctaagacgtgtcctg
cagaaagctgcagaggaccaagccactcactggacagaagccatgatccagagggccctc
cacttgataggtcaggcattgcttgaagagaaaacacagcttgaggatagcactgtggaa
gacgtgacctttgatttcagcctcaaggcccgcaaaattggttcagaacacggcaagtca
gtgttcctcctgttgtccaagattaaggctgttccttcccttgaagctcagaaagacatg
attaaatgggttctacagatgtttgagattgtcaagtgccttagagagaaatccagtcca
acagcctctatgagtatggaggcaaccaaacctgaagagagtgctcaggacaaagagaaa
gctgagcgcaaaaggaaggcagaagcagccaaactccaccggcaaaagatcatggcccag
atgtcagcaatgcagaaaaacttcattgagtcaaacaagatgctgtatgataacatgcca
gagagcggggcgcagggagagcctgatacagctactgagagctgcgccatggagcagatg
gagctgtgtgtagccattgggccccaccgagggtccactccagccgagagggaggtgctc
acctgcattctttgccaagaagaacaggaagtggctggccaggctcaagccatggtactg
actgcgtgtgtccagaggtccacggtgctgacacagtgcagaggaaagataccgaccaac
aacgcagacgggacagggacatatcccctcttcatgcctcctgaactggcagttggaacc
cacactggcagctgcggacatgtcatgcattccacgtgttggcagaaatattttgaggct
gttcagaatacaaccaggaaccggctgcacgctgacatgatcatcgacctggagaatggg
gagtacttgtgtcccctgtgcaagagtctgtgcaatactgtcgtccctctcatcccattg
gaaccactaatgtttaattatgaaaatgcagagataattggaccgcatttgaccctgcct
cgctggatccagatcatctctgccaggattaaaggactcaagtcagtcaatcaggataat
gattgcaacgcagaatgcagtagtgctgagggagacatgggactgtgcggagagggccag
ccagactttagatccattctgagctatggtgtacaagaaccgaggaagttttcagacagc
atagtggagatgctggttgtgtgcgccaccacagtccacagggtcgggctgcagacggca
cccaatgagctgtgcccacgcgtgccccttatggcttggaacacatgtgccttcactatt
caggccatagaaaacatattgcatgaggaggacaaaccactctttggatccttacaaaac
agacagcttgcaggtctgaaggcaattgttcagtttgccgcagctcagagacttaagagc
tcccaggctgtcattcagaggcacttcaccgacatgttgggggttttgctaccggtcgtg
agcagaaagaacaccccttctgttctggaggtggacttcttccatctcctggtggggttg
gtgctatctataccgtcactatatcaggaggaggctgtagacttacagccgtctgctgtc
agctctgcctacaaccacttgcacatcctgcatctggtcactatggctcacgtgctgcag
atccttctgacatctacagatttccctgcagtagcatgtggagaggagacagaggaggca
agagcagcggcagagctgtgcactacagtgtcacagtgcactggaaggctgattccagat
gtgtctggaagctctgtggcagaaagagtgaaacgaggaatcgaacctttcctacgctgt
gctgctctctttttcagttgccttacaggagtgcatcctccagaggagctctttggtact
actgttacctctcaagcacagatggaggcactgtgcagctacttggcactaccctccaat
gtgttccagctcttccaggagcacaggaattctgttactccactgctgcaacgatggtgt
gggagcccagctgcagctgttaccaaagccttgaaaggaaaaatccagacagtgagatac
cctagaagaaggaatcgtttaatcgagcttcccgaggattacagtgctctcctcaatcaa
gccagccattttcagtgtcccaaatcctccgatgatgagaggaagcatccgaccctgtgc
ttgttttgtggggccatgctgtgctctcagagctcgtgctgtcttagccagctagatggg
gaagatgtcggggcttgcactgcccacgctgctacctgtggtgcaggagtggggatgttc
cttagggtaagagagtgcgaaattgttctgatggccagcaagactcgaggaagcacatac
gctgccccttacctggatgattatggggagactgatcctcaccttggaaggggcaatcca
ttacacctttgcccagagcgctacaggaagctgaaccagctgtggcagcagcactgcatc
ctggaagaaattgcccgcagcctagaggtggtcagcgttgtgtttgcctttgagtggcag
atgttgtga
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integrated database retrieval system
