Larimichthys crocea (large yellow croaker): 104921440
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Entry
104921440 CDS
T04659
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104921440 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104921440 (vps35)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104921440 (vps35)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
104921440
NCBI-ProteinID:
XP_019129587
UniProt:
A0A6G0J108
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Position
VIII:complement(7651386..7670625)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLEGTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILSLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgcagcagtctcctcaggatgaacaggagaagcttctggatgaagctgtg
caggctgtcaaggtccagtcgttccagatgaagcgatgcctggacaagaacaagctgatg
gatgctctgaagcatgcctccaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactacgagctctatatggctatctctgatgaactccactacctagaggtttat
ctgactgatgagttcgccaaaggacgcaaggtggcagatctctacgaactggtccagtat
gcaggaaacatcatccccagactctatctgctaatcacagtaggcgtggtgtacgtccgc
tccttccctcagtcccgtaaggacatcctgaaggacctggtggagatgtgccgcggtgtc
cagcacccactcaggggtctcttcctcagaaactacttgttgcagtgcacccgcaacatc
ctgccagacgacggggagcaggcagagggcacagaggaaatgaccggtgacatcaatgac
tccattgactttgtcctcctgaactttgcggagatgaacaagttgtgggttcgaatgcag
catcagggtcacagccgagaccgagagaagagggagaaggaacgacaagaactcaggatt
ctggtgggcaccaacctagttcgcctcagccagctggagggcgtcaacgtggaaaagtac
aaacagattgttctttctggagtcctggagcaggttgtgaactgcagagactcgttggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagttccaccttcagacc
ctgaatcctttcctgcgttcctgtgctgagctccatcaacacgtcaacgtcaagaacatc
atcattgccctcattgacagactcgctctgtttgctcatcgagaagatggtcctggcatt
ccagccgagatcaaactatttgacatcttctctcagcaagtggccactgtcattcagtct
cgtcaggacatgccatcagaggacgtggtctctcttcaggtctcgctcatcaatttggct
atgaagtgctaccctgatcgcgtggactatgtagataaggtcctggagggcactgtggag
atattcaacaagctcaacttggaacacatagcaaccagcagcgcagtgtcaaaggaactc
acccggctgctgaagatcccggtggacacctacaacaacatcctgacggtgctgcagctc
aagcacttcccaccgctctttgaatacttcgactacgagtcgcgcaagagcatgagttgc
tacgtgctgagcaacacgctggactacaacaccaccattgtggcacaggaacaggtggat
gccatcttgagcctggtatccacactgatacaggaccagccagaccaaccagctgatgat
cctgaccctgaagacttcgccgaggagcagagccttgttggtcgtttcatccatctgctc
cactctgaagaccctgatcaacagtaccttattctgaacacagcccggaaacactttggt
gcgggtggaaaccaaaggattcgctacacactccctcctctggtgttcgctgcctaccag
ctggccttcagatacaaggaaaactcatcagtggatgacaagtgggaaaagaagtgtcag
aagatcttctccttcgctcaccagaccatcagtgcacttatcaaggccgagcttgccgag
ctgccgcttcgactcttcctgcagggggcgctggcagctggggagattggctttgagaat
cacgagactgtagcttatgagttcatgtcacaggccttctctctgtacgaggacgagatc
agtgactccaaagcccagttggccgccatcacactgatcattggtaccttcgagcggatg
cgatgtttcagcgaagaaaaccacgagccgctgaggacccagtgcgcgctcgccgcctcc
aagctgctgaaaaagcccgaccagtgccgggccgtcagcatctgcgcccacctgttctgg
tcaggtcgcagcactgacaaaaacggtgaagagattcgtgatggtaagcgggtgatggag
tgtctaaagaaagctctgaagattgccaaccagtgcatggacccgtcgctgcaagtccag
cttttcatcgaaatcctcaacagatacgtctgcttctatgagcgggaaaacgacgcggtg
actgtccaagtattaaaccagctgattcaaaagatcagggaagatcttcccaacctggag
gcgagcgaggaaacggagcagatcaacaaacacttccacaacacactggagcatctccgc
ctgcagagagaatccccggagtccgagggccccgcctatgagggcctggtcctttaa
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