Larimichthys crocea (large yellow croaker): 104921466
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Entry
104921466 CDS
T04659
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X2
KO
K17902
TBC1 domain family member 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104921466 (tbc1d4)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104921466 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104921466 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104921466 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
PTB
DUF3450
Motif
Other DBs
NCBI-GeneID:
104921466
NCBI-ProteinID:
XP_010732306
LinkDB
All DBs
Position
XVIII:complement(19471232..19499141)
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AA seq
1249 aa
AA seq
DB search
MESQDERESSPPKSDRRFALTYIGWSTLDRRTTLPMLPWLVAEIRRRSERGDCGPAVQPR
EVQLVLNPPFIRCVPCSSNNSSVFIFEHKAQLISRFIHNSNDLTYFAYLLRGQPDNPESE
MSCHVFKAGDPNQVPEVISSIRQVSKSALKEDAKPRQEADEAFYNSQKFEVLYCGKVTVL
HKKAPSTLIDDCIDKFHQHEVERKRLRLLNGQRGSTESPPVEFVVGAEGDPLSAVLTKSI
EEPGEGPGVEDMSGVKGLSSSTSQSSLRGAFPECILEDSGFEEPQEFRTRCSSMAGGMQR
KPGEGMMIGPTRRRHSSAPNHVQPSDADKNRTMLFQVGRFEVNLISPDSKTVVLEKNFKD
ISSCCQGIKQSDHFGFICRDPAESGPSQYVCYVFQCASESLVDEVMLTLKQAFTTAAALQ
SNKTQIQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLTDNEQVEIFERVQRSKP
GSDQEENELVILHLRQLCETKQRSHLHIGEAPQNAANSSSSGDGAGTSSRFKLDILKNKA
RTSLTSSLENIFARGASRMRGRLGSMGSISSFERQDEESPGHSPPGSPPAFPDDDPEAGL
QFRRRAHTFSHPPVKKRISFEGQPSSQSRQAPLRRQQSVNPELLQSSPVAVSRTRSVSES
ESSFSLPSSFSAPTFLKSIYQGSLGSLSSLADSGSLKSNGEGRKRTLSGCSSDSVSGGLP
PTPRRVSWRQKIFLRVASPMNKPSAAMQDPDHSDGRELLPLSPHALDPSLDPLGRLLPPG
ERPKKTRADYRALWKTAIHQQILLLRMEKENQRLEASRDELHIRKMKLNYQEVGQCSKDA
QALWERKLTAPGRMTVPQDKEEMYRALCQGVPKSRRGEVWLLLSHQHRLRHRLPQRQHAP
DTAYHDLLKQLTAQQHAILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGYC
QGISFVAGVLLLHMSEEQAFDMLKYLMYDLGIRQQYRPDMVSLQIQMYQLSRLLHDYHRE
LYNHLEEHEICPSLYAAPWFLTLFASQFPLSFVSRIFDFVFVQGTGVIFKVALCLLSSHE
GEIVECDSFESIVDYLKTTLPALTHTQMEETIAKVMEMDISKQLHAYEVEYHVLQDEMLD
AGPLPDDSERLDKLEKTNVQLKKQNMDLLEKLQAARQKIQTLETSVENFLSRESKMKHMI
RSLEQERAAYQKTIERMRSCLPPDALTDVEMTQIKTGPNGKAKTAAKKP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggagagccaggatgagagggagagcagccctccgaagtcagacaggaggttcgccctc
acttacatcggctggtccacgctggacaggcggaccaccctgcccatgctgccgtggctg
gtggccgaaatccgcaggaggagcgagagaggcgactgcggccccgcggtgcagccgaga
gaggtccagctggtcctcaaccctcccttcatccgctgcgtgccctgcagcagcaacaac
tcctccgtgttcatcttcgagcacaaagcgcagctcatctcccgcttcatccacaacagc
aacgacctcacgtacttcgcctatctgctgcggggacagccggacaaccccgagtccgag
atgtcctgtcacgtcttcaaggccggcgaccccaaccaggtccccgaggtgatcagcagc
attcgccaagtgtccaaatcagccctgaaggaagacgccaagcccagacaggaagctgac
gaggccttctacaactcccagaagtttgaagtgctttactgtggcaaggtgacagtcctg
cacaaaaaggctccatccaccctcatcgatgactgcattgataagtttcatcagcacgag
gtcgagcgtaagcgcctgcgcctgctcaacggccagcgagggtccacagaaagtccccct
gtggagttcgtcgtgggggcagaaggagacccactgtccgctgtcctgactaagagtata
gaagagcctggagagggccccggagtggaggacatgagcggagttaaaggcctgtctagc
agcaccagtcagagcagcctccgcggagcgttccccgagtgcatcctggaggattctgga
ttcgaggagcctcaagagtttcgtacgcgctgcagcagcatggcagggggcatgcagagg
aagccgggggaaggcatgatgataggccccacgcgtcgacgacactccagtgcaccgaat
catgttcagccatccgacgcggacaaaaaccgcaccatgctcttccaggtcggccgtttt
gaagtgaacctcataagtcccgacagtaaaactgtggtgctggagaagaactttaaagat
atctcatcgtgctgtcagggtatcaagcagtccgaccactttggattcatctgtcgggac
ccggcagaatccggccccagtcaatatgtgtgctatgttttccagtgtgccagtgaatct
ctggtggatgaggtgatgctgaccctgaagcaggccttcaccacggcagcagccttacag
agcaacaagacccagatccagctatgtgaagcctgccccatgcacgacctccacaagctc
tgcgagcggattgaaggtctctatccacccagagcaaagctagccatccaaaaatatctc
tcccagctgactgataatgagcaggtggagattttcgagcgggttcagagatcgaagccc
ggctcagaccaagaggagaacgagctggtgattctccacctcagacagctctgtgaaacc
aaacaaaggtcccacctccacatcggagaggcccctcagaatgcagcaaacagctcatca
tcaggagacggcgcaggcaccagcagccgcttcaaactcgatattctcaagaacaaagct
cgcacctcgctcaccagctctctggagaacatctttgcacggggtgccagtcgtatgcgg
ggccgcttgggaagcatgggaagcattagcagtttcgagaggcaggatgaagaatctcct
ggtcactcccctccgggctcccctcccgctttccccgacgatgacccggaagctggactg
cagttccgccggcgtgcacacaccttcagccatccacctgtgaagaaacgcatctcgttc
gagggacagccgagcagccagagcagacaggctccgctgcgcaggcagcagtccgttaac
ccggagctcctgcagagcagtcccgtggccgtctcgagaacgcgcagcgtttcggagagt
gagtcctccttcagcctcccctcctccttctccgctcccactttcctgaaaagcatttac
cagggctcactgggctccctgagctccctggcagacagtgggagcctcaagagcaatggg
gaaggcaggaagaggaccctgtccggctgcagcagcgactcagtgagcggaggtctccct
ccgaccccacgcagggtctcctggagacagaagatcttcctgagggtcgcctcgcccatg
aacaaaccgtctgcagccatgcaggacccagaccactctgacggcagggagctgttgcct
ctctcccctcacgccttggacccgagtctggatcctttgggccgcctgctgccaccgggt
gagagacctaagaagacgagggccgactaccgggccctctggaagaccgccatccatcag
cagatcctgctgctgcgcatggaaaaggagaaccagagactggaggcgagcagagacgag
ctgcacatccgcaagatgaagctgaactaccaagaagtgggccagtgctccaaagatgcg
caggcattgtgggagagaaaactgacagccccgggcaggatgacagtcccacaagacaag
gaggagatgtatcgtgcactctgccaaggtgttcccaagagcaggcgcggggaggtgtgg
ctgctgctttcccatcagcaccggctgcgtcacagactgccccagcgtcagcacgccccg
gacaccgcctaccacgacctgctcaagcagctcaccgcacagcagcacgccattctggtg
gatctaggccggaccttccccacccaccagtacttctcagcccagctcggcgcggggcag
ctttccctctacaacctgctgaaggcctactctctgctggacacagaggtcggctactgc
caaggaatcagcttcgtggccggagtgctgctgctgcacatgagcgaggaacaggccttc
gacatgctcaagtacctcatgtatgacctcggcatcaggcagcagtacagacccgacatg
gtctctctgcagattcagatgtaccagctctccaggctgttgcacgactaccaccgcgag
ttgtacaatcacctcgaggagcacgagatctgcccgagcctctacgccgcgccgtggttc
ctcactctcttcgcctcgcagttccctctcagctttgtgtcccgcatctttgattttgtg
tttgtccaaggcaccggcgtgatctttaaagtggccctgtgtctgctgagcagccatgag
ggggagatagtggagtgtgacagctttgagagcatcgtggactatctgaaaactacactt
cctgcactcacgcacacacagatggaggagaccattgcaaaggtaatggagatggacatc
tccaaacagctgcacgcgtacgaggtggagtaccacgtcctgcaggacgagatgttagac
gccgggccgctgcctgacgactccgagcggctcgacaaactcgaaaagacgaacgtacag
ttgaagaaacagaacatggacctgctggaaaaacttcaggccgcacgtcagaagatccag
acgctggagacgagcgtcgagaacttcctttctcgggagagcaaaatgaagcacatgatc
cgctctctggagcaggagagggcagcttaccagaagaccatcgaacgcatgcgctcatgc
cttccccctgacgccctgacagatgtggagatgacccagatcaaaacaggacccaacggg
aaagccaaaactgcagccaagaagccctga
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