Larimichthys crocea (large yellow croaker): 104921549
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Entry
104921549 CDS
T04659
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104921549 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104921549 (trim25)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104921549 (trim25)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104921549 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
104921549
NCBI-ProteinID:
XP_010732419
LinkDB
All DBs
Position
X:complement(20500262..20509378)
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AA seq
698 aa
AA seq
DB search
MATMDESPFSLISLEDELSCSICLSPFNCPVTIPCGHNFCQDCLLATWKDCYSCPQCRTV
FATKPELKKNTVLSTVVETLNSRLTKSGASVIPEKSKAKKKDVIRCDACMEAEASQTCHT
CMASFCEEHLRPHQENPVFRVHQLTAPVSNLLERICTDHHKLMEFYCSQHARSICSICLQ
QVHKGCSFISSEDQRNLKESDLRGKLGLLDGKITKNETVVSQMRDMQNKLKDSATKRMKT
LSAEYEQMRVMLARDERDALMAVERELESGQAKLKGLMKKFTENIDSMSKAKEDIHSLLS
QSQTLGFLQASYNLPQNTNFDPYTPRINLDSKKVIASQAFAAALKEHLAEMFNQPFEARQ
VMLKPEKSAVPVSGSTGSQPESEQSDLQWQRRNPRSHSPGRSIMQPFIRPWNPVQHAQAS
ASGFKPLSPGTMGLEPQWGLMATPQGSGSPPKAVSKKKVQKPKKGQKSTEDTMGNENLSS
SMENLLEFNGKEAESREQPVAVTSDIPPNITSSEKRGELLKYATVLTLDQKTAHKRIALN
EGFTKASVSDEHENYPDSPERFTVCSQVLTSKGFSRGRHYWEVKLSSNNFIGLGLAYKSI
DRKGPTSRLGRNAQSWCVEWFNVKLSAWHNSSETVLVNPNSKRVGVLLDCEEGTATFYNV
AGRAYPFHSFVFPFTEAVYPAFWIFSSGSSISLCKLQD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatggacgagagtccgttttctcttataagtctggaggatgagctgagctgc
agcatctgtctgagtccctttaactgtccggtgacaatcccctgcgggcacaacttctgc
caggactgcctgctcgccacctggaaggactgctacagctgtccgcagtgtcggaccgtc
ttcgcaaccaaaccggagctgaagaaaaacacggtcctgagcaccgtcgtggagaccctc
aactcgaggttgaccaagagtggagccagtgtgatcccagagaagagcaaagccaagaaa
aaggatgtcatacgttgtgatgcatgcatggaggcagaagcgtcccaaacctgtcacacc
tgtatggcctctttctgtgaggagcacctgcgtcctcaccaggaaaaccctgttttccgc
gtccaccagctgactgctcctgtcagcaacctgttggagcggatctgcacggaccaccac
aagctgatggagttctactgcagccaacatgcccgatcaatctgcagcatctgcctccag
caagttcataaaggatgctccttcatctcctctgaggatcagaggaacctcaaagagtct
gacctcaggggcaagttgggtttgctggatgggaagattacaaagaacgagactgttgtc
tctcaaatgagggacatgcagaacaagttaaaggactcagcgaccaaaagaatgaagacg
ttgtcagctgagtatgaacagatgcgggttatgttggctcgagatgagcgtgatgctctg
atggcagtggaacgtgagctggagagtggtcaggccaaactcaagggtctcatgaagaag
ttcaccgagaacattgatagcatgagcaaagctaaagaagatatccacagtcttctgagt
cagtcccaaactctgggcttcctacaggcttcatataatcttccccaaaatacaaacttt
gacccatacacccctcgaatcaacctggactccaagaaggtgatagcatcgcaggccttt
gctgctgccctgaaggaacatctggcagagatgtttaaccagcccttcgaggccagacaa
gtgatgcttaaaccagagaaaagtgcagttcctgtttcaggaagtactggatctcagcca
gaatctgaacaatcagatcttcaatggcagagaagaaatcccagatcccacagtcctggc
cgttcaatcatgcagccattcatccggccctggaatccagtccagcatgcacaggcttct
gcttcaggatttaaacctttgagccctggaactatgggattggagccgcagtggggtctt
atggccacaccccagggttcaggttctccacccaaagcagtctcaaagaagaaagttcaa
aaacctaaaaagggacagaaatccactgaggacaccatggggaatgaaaatctatccagt
tcaatggaaaacctattggagttcaatgggaaagaagctgaatccagagagcaaccagtt
gcagtgacttcagacattccccccaacataacatcttcagaaaaaagaggcgaacttctg
aaatatgccacagtactcacattggatcaaaagacggcccacaaacgcatcgcactgaat
gaaggcttcactaaggcctctgtgtcagatgagcacgaaaactaccccgactcccctgag
cgtttcactgtctgctcccaggtgctcacctccaagggtttctccagagggcgccactac
tgggaagtgaaattgagcagcaacaacttcattggcttaggtttggcttacaagagcatt
gaccgcaaaggtcccacaagtcgcctgggacgcaacgcacagtcctggtgtgtcgagtgg
tttaacgtcaagctgtcagcttggcataacagcagcgagaccgtgctggtcaatcccaat
tcaaagcgcgtaggtgtgctgttggattgcgaggagggcactgctacgttctataatgtg
gcaggcagggcatatcccttccactcctttgtgttcccctttactgaagcggtgtatcca
gctttctggattttctcaagtggctcgtccatttctttgtgcaagctgcaggattga
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