Larimichthys crocea (large yellow croaker): 104921696
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Entry
104921696 CDS
T04659
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104921696 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104921696 (pola1)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104921696 (pola1)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
104921696 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
104921696
NCBI-ProteinID:
XP_019130110
LinkDB
All DBs
Position
XXIII:12503245..12555335
Genome browser
AA seq
1471 aa
AA seq
DB search
MAPVSNPDKDMDGPDGDDGGDACGLAKSRSRREKREKVGRKSALEQLKKAKRGEKIKYEV
EELTSVYEEVDEQQYSKMVRDRQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENNKGKA
GAKGADSKKNVKKSVVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPN
VLTPPPVVTLKKKKSLGSPMNPFSIKPQMPKESPSATGLKAKVIRPPPADSTPRPSARPP
PSTAPLPVEKQKVKEEELDEEEGNDALAFDGVDFDEPMEVGLEEEKPVVKDDVEPKATAK
VAVKAEPKAEPQDPVLLSNRIGSSWGQEEGGSSEAPAEIQVDSSQLPLVEGEDGEQVFRF
YWLDAFEEPYSQPGVVYLFGKVWIESAKSHVSCCVTVKNIERTMYFLPREYKVNTKTGEV
SDTPVGMMDVYQEFNELSEKFKIMKFKSKKVEKNYAFEIPDVPNQCEYLEVRYSAEFPSL
PSDLKGVTFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLISQPVSWCKVEALALRCD
LVTVVKDLSPPPITVMSISLKTIQNPKTHHNEIVSLAALIHYEFHMDKAPPQPPYQSHFC
VVSKPSDCIFPYDFKDAVKKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGFDL
EVILQRINVCKVPHWSKIGRLRRANMPKLGGRGSFAEKSATCGRLVCDVEISAKELIRCK
SYHLTELATQVLKVERATVSQENIKNLYSDSPHLLYLLELTWTDAKLILQMMCELNVLPL
ALQITNIAGNVMSRTLMGGRSERNEFLLLHAFHDKNYIVPDKPSFKKALMEMAEGEEDAG
KGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAQNTQKK
NEEEELEEIPEIPDPDLDMGILPKEIRKLVERRKQVKQLMKSQDINPDLYLQYDIRQKAL
KLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMIN
TNSRSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGEGRYS
VKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDVIVENIQKHLVEVGEKVAAGEIP
LSQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGHRVKAGDTVSYIICKDGSTLAAS
QRAYALEQLQKQEGLTLDTQYYLAQQIHPVVSRICDPIEGIDGVLIATWLGLDPGQFRAQ
QQYQREEEADGTLGAPVQLTDEERYKDCERFTFTCPQCGTDNVYDSVFEGAGLKLEPSLM
RCCHIPCGSRPIDHAVNISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRRLPIAFSRHG
PICPACTRATLRPEYSEKALYNQLCFYRFIFDWEYAVAKVLPPEERSRTKTWNREEKVYR
RLKEVPDKALATSGYSEINLAKLFQAFSSIK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtatcaaacccagacaaagacatggacggtccggacggagacgatggaggt
gatgcctgcggtctggcaaagtctcgctccagacgggagaagagggagaaggtggggagg
aagtctgctctggagcagcttaagaaagccaagaggggggagaagatcaaatatgaggtg
gaggagctaacaagtgtgtacgaggaggtggacgagcagcagtactcaaagatggtacga
gacagacaagaggacgactggatcatcgatgacgatggaacaggatacgtggaggacggg
agagaaatcttcgacgatgatttggacgacgatgtagtcgaaaacaacaaaggtaaagcc
ggagctaaaggagcggactccaagaaaaatgtgaagaaatctgtcgtggccaagcccaac
accatcaagagtctcttcatgaacagtaatgtgaaaagacctgctgagaaagacgtggac
ctgtccaaagatgacctgttaggagatatcttacaggacctgcactctgagaaaccgaat
gttctgactcctccacctgtggtcactctgaagaaaaagaagtctcttgggtcacccatg
aaccccttttccatcaaacctcagatgccaaaggagtcgccctcagccacagggttaaag
gccaaagtcatcaggccacctcctgctgactcgacccccaggccatcagcccgtccacct
ccctccacagctccccttcctgtggagaagcagaaggtcaaagaggaggagctggatgaa
gaggagggaaatgacgccctggcgtttgatggagtggactttgatgagccgatggaggtc
gggctcgaggaggagaagcctgtagtgaaggatgatgttgaacctaaagcaacagcaaag
gtggcagttaaagcggagcccaaagcagagccccaggaccctgtcttactgtccaacagg
atcggatcctcctggggacaagaggagggtggaagcagcgaggctccagcagagatacag
gtcgactccagccaactcccactggtggagggagaagacggggagcaggttttccgcttc
tattggttggatgcctttgaagaaccctacagccaaccaggtgtggtgtacttgtttgga
aaagtgtggattgagtccgcaaagtctcacgtcagctgctgtgtcaccgtcaagaacatc
gagcggaccatgtacttcctgcctcgtgaatataaagtgaacaccaagaccggggaggtg
tcggacactcctgtaggaatgatggacgtctaccaggagtttaacgagctctccgagaag
ttcaagatcatgaagttcaagtccaagaaagtggagaagaactatgcgtttgaaattcct
gacgttcccaatcagtgcgagtacctggaagtcagatattctgctgaattcccatcactg
ccttcagacctcaagggggtgacattttcccacatttttgggaccaacacttccagcctg
gagcacttcctcctcagcaggaagattaaggggccttgctggctggacatcaagacacca
cagctcatcagccagccggtcagctggtgtaaggtggaggctctggccctgaggtgtgac
ctggtcactgtggtcaaagacctgtcacctccacccatcactgtcatgtccatcagtctc
aagactatccagaaccccaagacacaccacaacgagattgtgtccctggcagcactcatt
cactatgagttccatatggacaaagctccacctcaacctccgtaccagagccatttttgt
gtggtcagtaaaccgtctgactgcatcttcccctacgacttcaaagacgctgtgaagaag
aagaatggcaaagtggagatagctgctacggagcggactctgctcggcttcttcctggcc
aagatgcacaaaatcgaccctgatgtgttggtgggtcatgacatctttggttttgatctg
gaagtgattctgcagaggatcaatgtgtgtaaagttccccactggtccaagataggacgc
ctcaggagagccaatatgccaaaactagggggccgtggttcctttgcagaaaagagtgcg
acctgtggccgtctggtgtgcgatgtggagatctcggccaaagagctgattcgctgtaaa
agttaccatctgactgaactggccactcaggtgctgaaggtggagagagccacagtctca
caggaaaacatcaagaatctgtacagtgactctcctcacctgctctacctgttggagctg
acgtggacggacgccaagctgatcctccagatgatgtgtgagctcaacgtgctgccgctg
gccctgcagatcaccaacatcgctggaaatgtcatgtctcgtactctgatgggcggtcgc
tctgagaggaatgagttcctgttgcttcatgccttccacgacaaaaactacatcgtccca
gacaaaccttccttcaaaaaggccctgatggaaatggctgaaggagaggaagatgcagga
aaaggcaagcggaagaagaaggcagcgtatgctggaggtctggtgctggatcctaaagtt
ggtttctatgacaagtttgtgctgctgctcgacttcaacagcctgtatccctcaatcatc
caagagttcaacatctgcttcaccactgtgcagagagaagctcaaaacacacagaagaag
aacgaggaggaagagttagaggagattcctgagattccagatccagacctggacatggga
atcctgcccaaagaaatccggaaactggtcgagcggcgtaaacaagtcaaacagctgatg
aaaagccaagacatcaacccggacctctacctgcagtacgacatccgtcagaaggctctg
aagctgactgctaacagtatgtacggctgcctgggattcagctacagccgcttctacgcc
aagccactcgccgccctggtcacacacaagggtcgagagattctgatgcacaccaaagac
atggttcagaagatgaatttggaagtcatctacggcgacacagactccatcatgatcaac
actaacagcaggtctctggaggaagtcttcaaacttggcaataaggtgaaggcagaagta
aacaagctctacaaactgctggagattgacatcgacggtgtgttcaagtcacttttactg
ctgaagaagaagaagtacgctgccttggtggtggagaaccacggcgaaggacgatacagt
gtcaagcaggaactcaaaggcttggacatcgtccgcagagattggtgtgacctggccaag
gaatgtggcaactatgtgatcggacaaatcttgtcagaccagaatcgtgacgtcattgtt
gagaacatccagaaacacctggtggaggtgggagagaaagtagcagctggagaaatacct
ctcagccagtatgagatacacaaggctctgactaaagatcctcaagactatccagataag
aagagcctccctcacgtccatgtggctttgtggatcaactcccaaggtggtcaccgggtc
aaagctggagatacagtctcttacatcatctgcaaggacggctccacgctggcagccagt
cagagagcctatgccctagagcagctccagaagcaggagggtctcactctggacactcag
tactacctcgcccagcagatccaccccgtggtgtcccgtatctgtgaccccatcgagggc
atcgatggcgtgctcatagccacatggctgggtctggacccgggtcagttccgggctcag
caacagtaccagagagaggaagaggctgacggcacgctgggagctccagtccagctgaca
gacgaagagcgctacaaagactgcgagaggttcaccttcacctgcccacaatgtggcacc
gacaacgtctacgacagcgtctttgagggagctggattaaagttggagcccagcttgatg
cgatgctgtcacatcccctgcggaagccggcccatcgaccacgctgtaaacatcagcaac
aaactgctgctcgacatccgtcgccacatcaagaagtactactctggctggttggtgtgt
gaggaccaggcctgccagaacaggaccagacgtttgcctattgccttctcccgccacgga
cccatctgccctgcctgcaccagggcgactctcagacctgagtactccgagaaggcccta
tacaaccagctctgcttctacaggttcatctttgattgggagtatgcagtcgccaaagta
ctaccgcctgaagagagaagtcgtacaaagacttggaacagagaagaaaaagtgtatcgg
aggctgaaggaagtgccagacaaagcgttggctaccagcggctactcggagattaacctg
gctaaactcttccaggccttctcctccatcaagtaa
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integrated database retrieval system
