Larimichthys crocea (large yellow croaker): 104921849
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Entry
104921849 CDS
T04659
Name
(RefSeq) uncharacterized protein LOC104921849
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104921849
Cilium and associated proteins [BR:
lco03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104921849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Polo_box_2
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
104921849
NCBI-ProteinID:
XP_010732813
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All DBs
Position
XVII:610571..621259
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AA seq
710 aa
AA seq
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MSGLRTMEDSSLIRCDSLDAGSGCDREAMTPFDPMTYDPEGSDLAANLEPTPAELAQCEA
EVGTLLTIIAELNKKMGSLKAPSEPGDLRPPRPSRPLVPDLLSHRLARSSPERNTASAVT
SKPPPTGRGGGGVVWTKLQEVLSSVEDSISSKRSWAAPITASDQDKHQEHLRAAQESWVK
ATQILEDMEREFGISCPSGLSKDQYQDNILNLEKRDPALRSILQSHQEEQEKAQSTTSQM
EEEKNKLVSLHKVWRSGSRSPSYGPPSGALSPEWASPPFPGSPLLHRRTARAVTPLSVGG
DGSPLGSVNSCSPCQSPIGLESETERLNRYIERLKARNERLTAALERKKAESEQITITLN
RLESDCSALQMALRYCEECEEAYGELLSLHDAKKQQSIPLHTDSAEEVGERQQPDSSSAQ
LRKMETEELSTSFSTAGVTEEMETQSYTGHRTPECVEREVFLRQQIERLKMERAAICLPK
PSPGVESKMSPETGHPAGSRGGHVTKDNAKPPDTKKEKTSLFYELISVREEMSDLRALIR
LKEKELRCLEWSLMAQKAQEAAGAFVPESIREELEDRKAEQQRLYEKAAKLGSDGDIADP
RTRPILKELQAVLQREQALKKRLALVQDSMNTALSDNTSHRRDNGEQIARLTQAHSKALS
SYRQIRRKYREQVWRLEQRVAAMTESHQHQSGAPKAAGEALEWRREETVL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggattaagaactatggaagattctagcctgatcagatgtgacagcctggatgct
gggtcagggtgtgacagagaggcgatgacaccattcgaccctatgacctatgaccctgag
ggctctgaccttgctgcaaaccttgagcctacaccagcagaactggctcagtgtgaggct
gaagtgggcacgctgctcactatcattgctgaactaaacaaaaagatggggtcattaaag
gcaccaagtgaaccaggtgacctgagaccgccaagaccatccaggcctctggttccagat
ctcctgtcccacaggctggccagaagcagcccagagaggaacaccgcctccgctgtcaca
tctaagcctccaccgactggccgagggggaggcggtgtagtctggactaaacttcaggag
gttttatcgtcagtggaggactccatcagcagtaaaaggtcctgggctgcccccatcaca
gcttctgaccaggacaaacaccaagagcatctgagggccgcccaggagagctgggttaaa
gccactcagatattggaggacatggaaagagagtttgggatttcatgcccatcaggcctg
tcaaaggaccagtatcaggacaacatcttgaatctggagaagcgtgaccctgctcttcga
agtattttgcagagccaccaggaggagcaggagaaagcacaaagcactaccagccagatg
gaagaggagaagaacaagcttgttagtcttcataaagtctggaggtctggtagtcgctcg
ccttcctacgggcccccttctggggctctcagtccagagtgggcctctcctccctttcct
ggttcacctttactccacagaagaacagctagagctgttacacctctgtctgtgggtggg
gatggttctccactgggctctgtgaactcatgcagtccttgtcaaagccccatcggcctt
gagtctgagactgagcgactgaacaggtacattgagaggctgaaggccagaaatgaacga
ctgactgcagctctggagcgaaagaaagcagagtcagaacagatcactattacactgaac
agacttgagtctgactgctctgccctgcagatggctctcagatactgtgaggagtgtgag
gaggcctacggcgagctgctgtctcttcatgacgccaagaagcaacaaagcattcctctg
cacacagactcagcagaggaagtcggtgaaaggcagcagcccgacagttcatcagctcag
ctcaggaaaatggaaactgaggagctgtccacctccttctcaacagcaggggtcacagag
gagatggaaactcagagttacacagggcacaggacacctgagtgtgtagagcgagaggtt
tttctccgtcagcaaattgagcgcctgaagatggaacgggcagccatttgcctacctaag
ccaagcccaggagttgagagcaaaatgagccctgaaactggtcacccagctggatcaaga
gggggacatgtgactaaagacaacgccaaacctcctgacaccaagaaagagaaaacgtct
ctcttctatgaactcatctctgtcagggaggaaatgtcagatctgcgagctctaatccgc
ctcaaggagaaggaactgaggtgtctggagtggagtttaatggctcagaaagctcaggaa
gcagctggagcattcgttccagaaagcatcagagaggagctcgaggatcgcaaggctgaa
caacagaggctctatgaaaaggcagctaaactgggtagtgatggagacatcgctgatcct
cgaaccagacccattcttaaggagctgcaggccgtcctgcagagggagcaagccctgaag
aagagattggctttagtccaggactcaatgaacacagctctttcagacaacacctcccac
aggagggacaatggagagcagattgctcgtctcacacaagctcacagtaaagccttgagt
tcgtaccggcagattcgcaggaagtaccgcgagcaggtgtggaggctggagcagagagtg
gcagccatgacggagagtcaccaacaccagagtggagcgccgaaagctgcaggagaggcc
ttggagtggaggagggaagagactgttctctga
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