Larimichthys crocea (large yellow croaker): 104921900
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Entry
104921900 CDS
T04659
Symbol
rars
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104921900 (rars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104921900 (rars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104921900 (rars)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104921900 (rars)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
104921900 (rars)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (G)
104921900 (rars)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104921900 (rars)
Prokaryotic type
Other AARSs
104921900 (rars)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
104921900 (rars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
CCDC90-like
HPD
Nup54
LisH_TPL
tRNA-synt_1
FemAB
DivIC
Motif
Other DBs
NCBI-GeneID:
104921900
NCBI-ProteinID:
XP_010732880
UniProt:
A0A0F8ALX2
LinkDB
All DBs
Position
XXII:20711821..20734091
Genome browser
AA seq
655 aa
AA seq
DB search
MGDPVTEYTARLQQQEQDIQSLSAEIESLKNPQDLNASARLEELREENARLKYRLNILKR
GLQEERTMMNINQRLQEVFGEAIRAACPELDNPPLAVAPNQQAKFGDYQCNSAMAMAQML
KAKGVKINPREIAEKIIQNLPDNELVEKTEIAGPGFINIHLKRAFVSKLLSNLLVNGVQP
PPLAAKKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFLGYDVLRLNHVGDWGTQF
GMLIAHLQDQFPNYLTISPPISDLQAFYKESKKRFDEEEDFKKRAYQCVVRLQSKEPDII
KGWNLICDVSRKEFQRVYDCLDVSIIERGESYYQDMMTDVVKEFEKEGFAQLDEGRKIVF
VPGQSIPLTIVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQSTHFQVVFAAAQM
IGWYDPQVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKV
LTPEELSKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIRSIA
RLANIDEATLRKAAETSEVLLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYELA
TTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVDRM
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccctgtaaccgagtacacagcccggctgcagcagcaggagcaggacatccaa
agtctctctgcagagatagaaagtctaaaaaacccacaggacctgaacgcatctgcacgt
ctggaggagctgcgggaggaaaacgccaggctgaagtaccgtctcaacatcctaaagagg
ggactgcaggaggagaggaccatgatgaacatcaaccagcgcctccaggaggttttcggc
gaggccatccgggctgcctgccccgagctggacaaccctccactggccgtcgcgcctaac
cagcaggccaagtttggagactatcagtgcaacagtgccatggccatggcccagatgctg
aaggcaaagggagtgaaaatcaacccaagggaaattgcggagaagatcatccagaacctt
ccagacaacgaactcgtcgaaaaaactgaaattgcaggaccagggttcatcaacattcac
ctgaagagggcgttcgtgtccaaactgttaagcaacctgctggtcaacggagtgcagccg
cccccactggccgccaagaagaaggtagtggtggacttctcctcccccaacatcgccaaa
gagatgcacgtgggtcacctgcgctccaccatcatcggggagagcatgtgtcgactgttt
gagtttctgggctacgacgttctgaggttgaaccatgttggagactgggggacccagttt
gggatgctgattgcccacctgcaggatcaattcccaaattacctgaccatctcccctccc
atcagtgacctgcaggccttctacaaagagtcgaagaagcgcttcgacgaggaggaggac
tttaagaagcgagcgtaccagtgtgtcgtcagactgcagagcaaagagcccgacattatt
aaaggctggaacctgatctgtgacgtctccaggaaagagtttcagagggtttacgactgc
ctggacgtcagcatcatcgagagaggagagtcatactaccaggacatgatgacggacgtg
gtgaaggagtttgaaaaggaaggctttgcacagctggatgagggtcgtaaaattgtcttc
gtccctgggcagtccatccccctcaccatcgtcaagtctgacggtggctacacttacgac
acgtcggacctcgcggccctgcgtcagcgactctttgacgagaaagccgacatcatcatc
tacgtcacagacagcgggcagtccacacacttccaggtggtgtttgctgcggctcagatg
attggctggtacgaccctcaggtgacccgcgtggagcatgcaggctttggagtggtgctg
ggtgaagacaagaagaagtttaagacccggtctggagacacggtgaggctgatggacctg
ctggaggaaggactgaaaaggtccatggacaaactgaaggagaaggagagagacaaggtc
ctgaccccggaggaactatccaaagctcagagatcggtcgcttttggctgcatcaaatac
gctgacctctcccacaaccgcatcaacgactacgtcttctcgtttgacaagatgttggat
gaccggggcaacacagcggcgtacctcctctatgccttcacccgcatcaggtccatagct
cggctggctaacatcgacgaggccactctgaggaaagcggcagagacctcggaggtcctc
ctggaccacgagaaggagtggaagctggggaagtgcatcctccgtttcccagagatcctg
cagaagatcctggatgatctgctgctccacacgctctgcgactacctgtacgagctcgcc
accaccttcaccgagttctacgacagctgctactgcgtggagaaggacagacagacaggt
gaggtggtgaaggtgaacatgtggaggatgctgctctgtgatgctacagcggccatcatg
gccaaagggtttgacatcctgggaatcaaccccgtcgacaggatgtga
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