Larimichthys crocea (large yellow croaker): 104921907
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Entry
104921907 CDS
T04659
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104921907 (btaf1)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104921907 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_EZ
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
104921907
NCBI-ProteinID:
XP_027128940
LinkDB
All DBs
Position
III:46694272..46713209
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AA seq
1857 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPSPKPKEESCEDLSPEDSSCDRLTFYHFDISRLLKHGASLLGS
AGAEFELQDEKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYTCQTS
GFRAHGSKTTAGSSSRNHIPIQAAELIDSEFRPGMSSRQKNKAKRMAKLVAKQRSRDMDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSGLLEEIHEWPLESFCEEL
CNDLFNPSWEVRHGAGTGLREILKSHGAGGGKLVGSTAEQMSRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAASSLIPVVEGLVQLLPNKVP
FIVNTLWDSLLDLDDLTASTNSIMTLLSSLLTYPQVRESSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLFTLLSKADQSCAMWINPILQDMLRHIFQSCILESNEEILELIQKVWMEL
LSQAPQQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARCKDKAGTKARQGTNQVK
ETVQEYIAGAETVTDDAVTRDYVVVRARLMAARLLGALCRCICDPQLNAASQEIRPAESL
GQLLLFHLNSKSALQRIAVALVLCEWSALQKDCQVVSSMVHPRLLGILSEQLYYDEIAIP
FTRMQNECKQLIALLADSNIDLQDRLNCSVFTIDQANELVTTIFTESTAGLNVKSKQWQA
LDSKRQQAQATVMETNTDWQQLHLRVHMFTACAVINLQVLPDKLNPLVRPLMEAIKREEN
TLIQGYAASFIAKLLQQCAGRSPCPNPKIIKNLCASSCVDSTATPSSACPVPPTQENAKG
SGLEKDGMHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKTPSTELPPGSTISTDND
ESKKPFLIQRRGAEFSLTTIARHFGADLTKSLPYLWENTVGPLRTVVTENHSIDRQVQLE
RGDGAAQDLVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMTARCVGVL
SKIAMLETMNSFLECVLPWLAAIEDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVLG
RMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQLLDGRKL
ENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRT
QEYAKTKAADCSPMPSLVVCPPTLTGHWVDEVGKFCTKEYLNPLHYTGPPTERMRLQHQV
KKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVILSG
TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALH
RQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISTAST
EEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRISEQLTSQNSSLRDIQHAP
KLSALKQLLLDCGLGGGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSVTY
LRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL
QAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQDNASLQSMGTDQL
LNLFTLDKGEKGEKGEQSPSTSGKASMKSVLDGLGELWDQQQYDTEYNLDNFMHSLQ
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcaagacttgatcgtttgtttatcctgcttgacaccggaacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaacta
aacaacctcctgtcaaaggtcttgacctacctaaggagtcccaactgggacactcgtata
gcagcaggccaagctgtagaggccattgtgaagaatattcctgagtgggacccgagccca
aagcctaaagaagagtcttgtgaggacttgtctccagaggactcctcttgtgaccgcttg
actttctaccactttgacatctcccgcctactcaaacacggggcgtctctgctcggatct
gccggggcagagtttgagctgcaggatgaaaaaactggtgagatggacccaaaggaacgc
ctggcccgacagagaaagctcctccagaagaaattgggtctggatatgggtgctgctatc
ggcatggatacagaggagctgttcaatgacgaggacctagactacacctgccaaaccagt
gggtttcgagcccatggaagcaaaaccacagctggatccagctcccgtaaccacataccc
attcaggctgccgagttgatcgactcagagttccggccaggcatgagcagtcgtcagaag
aataaggctaagaggatggccaagctagtggccaaacaaagatccagagacatggatcca
aatgaaaagagtaacgacagtttcgagggtgaacctgaagagaaacgaaggaaaaccacc
aatgtagttatcgaccagccggcaacagagcataaagtcttaatcgacaacgttccagat
aattcgggtcttttagaggaaatacacgagtggcctctagagagcttctgtgaggagctc
tgcaacgatctcttcaatccctcatgggaggttcgtcatggtgcaggcacaggtcttaga
gaaatactcaagtcccatggtgctggtggtgggaagctggtgggaagcactgcagaacag
atgtcacggcagcatcaggagtggatagaagacctggtcatccggctgctctgtgtcttc
gctctggaccgctttggagatttcgtatctgatgaggtggtggctcctgtcagggagacg
tgtgcccaaacactcggcgtggcccttcgccacatgaatgaaaccggggtttccatgaca
gtcgacgtcctgctgaagctgctaaaagaagaccagtgggaggtccgtcatggaggcctg
ctggggatcaagtacgccctggctgtccgacaggacctgatctctgtcttactgccccgg
gtgctccctgccattactgtaggcctacaggacctagatgatgacgttcgggctgtggca
gcctcttccctcatccctgtggtggaaggcttggtacagctactgcccaataaggtaccc
ttcatcgtcaacacactatgggattctcttttggacctggacgacctcactgcttccacc
aacagcatcatgacattgctgtcttcgttgctaacctacccgcaagtccgagagtccagc
atgcagcagtcattaacagttttagtccctcgggtttggccgttcttgagacacacgata
tcgtcagtaagacgggccgcactggaaacccttttcacactgctgtctaaagctgaccag
agctgtgcgatgtggatcaacccaatcttacaagatatgctccgacacatcttccagtcc
tgcatactggaaagcaatgaggaaatccttgaactgatccaaaaggtgtggatggagctg
ctgtctcaggccccccagcagtatgtggtagcagctagctgtccatggatgggcgcctgg
ctctgcctcatgatgcaggcctcacacattcccatagacttgaacatgctgctggaagtg
aaggctcgctgcaaggataaggctggtacaaaggcacgtcaagggaccaatcaggtgaag
gaaacagtccaggagtatatagccggcgcagagacggtgacagatgatgcagtgacaagg
gactatgtggtggttcgtgctcgcctcatggctgccagattgctgggagctctgtgtagg
tgtatctgtgaccctcagctcaatgctgcatctcaggagatccgacctgccgagtctcta
ggccagctgttgctgttccatctcaactccaagtctgccctgcagcgcatagccgtggct
ctggtgctttgcgagtggtctgcactgcagaaggattgtcaggtggtttcatccatggtg
catcctcgtcttttaggcattctgtcagagcagctgtactacgacgaaattgccatcccc
ttcacacgcatgcagaatgagtgcaagcagctcatcgcactgctagctgattccaacata
gacctgcaagaccgtctgaattgtagcgtttttacaattgatcaagccaatgaactggta
accaccatctttacagagtcaactgcaggtctcaacgtgaagtccaaacagtggcaggca
ctggacagtaaacgtcagcaggctcaggcgacagtgatggagaccaacacagactggcag
cagctgcatcttcgcgtccacatgttcacagcctgtgcagtgattaacctgcaggtgctt
cccgacaagctcaacccactggtcaggcctctgatggaggccatcaagcgggaggagaac
actctgatccagggatacgctgcctcttttatagccaagctgctgcagcagtgtgctgga
cgctcgccttgtcccaaccccaagatcatcaaaaacctctgtgcctcttcctgcgtggac
tccacagccacaccctcatctgcttgtcctgtaccccccacacaagaaaatgccaaaggc
agtgggttggagaaagacggcatgcatcacatggtcaacaaaacccgaggcatcatcacc
ctgtaccgtcaccaaagggcagcatttgccatcaccagtaagagagggccagcacctaaa
gccccaaagacccccagcacagagcttcctcctggcagcaccatcagcactgataatgat
gagagcaagaagccatttcttattcagagacgaggggcagagttctccttaacaactatt
gccaggcacttcggtgcagacctcaccaagtctctgccgtacctgtgggagaacacagtg
ggaccactgagaacagtggtgactgaaaatcatagcattgataggcaggttcagctggag
aggggagacggtgcggctcaggacctggtcaactctctacaagtgctggaagttatggct
ggagccatggccgctgaactcaaacctttgctactggagcacctaccccacctgttcact
tgcctgcagcacccgtacacagcggtgcgtcacatgacagcgcgctgtgtgggtgtgctc
agtaagatagccatgctggagaccatgaacagcttcctggagtgtgtgctcccctggtta
gctgctattgaagactgcaccaaacaggagggcgccatcgaggctttagcctgtgtcatg
gagcagctggatgtggacatcgtaccctacattgtgctgcttgtagtaccagtgctgggc
cgtatgagtgaccccagtgatagcattcgtttcatggccacacagtgctttgctacactc
atccgcctgttacccctggaggcaggtatacctgaccctccagccatgtctgctgacctg
atccgccagaaggccagagaacgccacttcctggagcagctactagatggccgaaaactg
gagaactataagatccctgtgcctattaaagctgagctcaggaagtaccagcaggatgga
gtgaactggctgtccttcctgaacaagtacaagctgcacgggatcctgtgtgacgacatg
ggcctcggcaagacgctgcagtccatctgcattctggcaggagatcactacctcaggaca
caggaatatgccaagactaaggccgcagactgcagccccatgccctctctggtggtgtgt
cctcccacgctgactggtcactgggtggatgaagttggcaagttctgcaccaaagagtac
ctcaacccgctgcactacactgggcctcctacagagcgaatgcggttgcagcaccaagtg
aaaaaacacaatcttatagtagcctcttacgatgttgtacggaacgacattgactttttt
agaaatataaaatttaactactgtatccttgatgagggtcacgtcatcaagaacgggaaa
accaaactttccaaagccatcaagcagttggctgccaacttccgagtcatcttgtcagga
acacccatccagaacaatgtcctggagctctggtcattgttcgacttcctcatgccggga
ttccttggaacagaacgtcagtttgccgctcgctatggaaaaccaatcctggccagccgt
gatgccaaaagttcctcacgggaacaggaggcaggtgtcctggcgatggaggccctacat
cgccaggtgctacccttccttctgaggaggatgaaggaggatgtcctccaggaccttcct
cctaagataattcaggactattactgtaacctgagtcctctgcaggttcagctctatgaa
gactttgcaaagtctcgagccaaggccagcgtggaggacagcatctctacagcctcgaca
gaagaggaggaaaagccgaagctgaaggccacaggccacgtcttccaggcgctgcagtac
ctacggaagctatgcaaccacccaagcttggtcctgaccccgcagcatccagagtacaaa
cgcatcagtgagcagctgacgagccagaactcgagcctgcgggacattcagcacgcaccc
aaactctccgctctcaaacagttgctgctggactgcggccttggtggtggcggcggatca
gaggggggcaccgaggcggtggtggcccagcatcgtgtgctcattttctgtcagttaaag
agcatgctggacattgtggagcacgacctgctgaaacccaaactgccctcggtcacctac
ctgaggttggacggcagcgtgccggcgggcctgcgtcactccatcgtttccagatttaac
aacgacccttccattgacgtgctgctgctgaccacccacgtcggcggtctgggtctgaac
ctgacgggcgcagacacggtggtgtttgtggaacatgactggaaccccatgagggacctg
caggccatggatcgagcccacaggataggacagaaacgcgtggtgaacgtgtacaggctg
atcacgcgaggcacactcgaggagaagatcatgggcctgcagaaattcaagatgagcatc
gccaacaccatcatcagccaagacaacgccagcctgcagagcatgggcacagaccagctc
ctcaacctcttcactctggacaagggcgagaagggagagaaaggtgagcagtcgccgtca
acctcagggaaggcctccatgaagtccgtgctggacggactgggagagctatgggaccag
cagcagtacgacacagagtacaacctggacaactttatgcactccctgcagtag
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integrated database retrieval system
