Larimichthys crocea (large yellow croaker): 104921928
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Entry
104921928 CDS
T04659
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104921928
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104921928
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104921928
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
RED_N
Motif
Other DBs
NCBI-GeneID:
104921928
NCBI-ProteinID:
XP_019126110
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All DBs
Position
X:complement(39539569..39546998)
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AA seq
660 aa
AA seq
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MRGGSSFGDRDRDRGRDRPRFGAMSGRSGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
TEHPDVQRMSQYEVEEFRRKKEITIRGSGCSKAVTAFHQAQFPQYVMDVLMQQNFKEPTA
IQSQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQ
INIGALELSANHNILQIVDVCMETEKDNKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQLVDSGR
GGGGGGGRMRYRGSSSNNPNLMYQEECDRRMRPGGGGGAGGSNKDNRGSFSRDGRNSRDA
DRSTSSSSSSSYRDRSRDRRNSYNSGSDQYQSYGGSGGYNSRSGAKSGGGGGQDQPSQPQ
GQFGQPPPPPPPPPASGILQPLMAQQFAPPQPPLMGFMGQPPYPFTSPPPPPPGPPPPRK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggatcttccttcggtgacagagacagggaccgtggacgagacaggccacgg
tttggggccatgagcggtcgcagtggacctccaccaatgaagtttgggaatcctggtgag
cgtctccgcaagaagaggtggaacctggacgagctgccaaaatttgagaagaacttttac
accgaacaccctgatgtccaacgcatgagtcagtatgaagtggaagagtttcgcagaaag
aaggagatcaccatcagaggctccggctgttcaaaggcagtcaccgcttttcaccaggcg
cagtttcctcagtatgtgatggatgtgctgatgcagcagaacttcaaggagccaacagcg
atccagtctcagggcttccctgtggctctgagtggcagggacatggtggggatcgcccag
accggctctggaaagacactggcttatcttcttcctgctattgtacacatcaaccaccag
ccctatctggagaggggagatggtccaatttgtttggtgctcgccccaactagagagctg
gctcagcaggttcaacaggttgcatatgattatggcaagtcctcccgtatcaaaagcacc
tgtgtctatggtggagcacccaaaggaccacagattcgagaccttgagaggggtgttgag
atctgtatcgccactcctggtcggctcattgatttcttggaatctgggaaaacaaacctg
cggcgctgcacctacctcgtgctggatgaggctgaccgcatgctggacatgggctttgag
ccacagattcgcaagatagttgaacaaatcaggcctgacagacagactctgatgtggagt
gcaacctggccaaaggaagttcggcagcttgccgaggacttcctgagggactatgtccag
attaatattggtgctttggagctcagtgccaaccataacatcctgcagattgttgatgtc
tgtatggagaccgaaaaggacaacaaactttttcagctgatggaggagataatggcagaa
aaagagaacaaaaccatcatctttgtggagacaaagaagcgctgtgatgatcttaccagg
aggatgaggcgtgacgggtggccagccatgtgtatccatggagacaaaagccagccagaa
agagactgggtactcacagaatttcggagtggtaaagctcctatactgattgctaccgat
gtggcctctcgtggtctggacgtggaagatgtcaagttcgtcatcaactatgactatccc
agctcctctgaggattacgtccaccgtattggacgtacagcccgcagtaccaacaagggc
actgcctacaccttcttcaccccagggaacttgaggcaggctcgagaccttgtccgggtg
ttggcggaggcccggcaggccatcaatcctaaactgcttcagcttgtggactcagggcgc
ggaggaggaggaggaggtggtagaatgcgttatcgtggcagcagctccaacaaccctaac
ctcatgtatcaggaggagtgcgatcgccgcatgcgccctggtggcggcggcggtgctggt
ggcagcaacaaagacaaccgcggcagcttcagtcgagatggccgtaacagccgcgatgca
gaccgctccacgtcctcctcctcttcttcctcctacagggacagaagtcgggatcgcagg
aatagctacaactcaggctcagatcagtaccagagttatggcggcagcgggggctacaac
tcccgcagcggtgccaagtccggcgggggtggaggtcaggatcagcctagtcagcctcag
ggtcagtttggccagcctcctcctcctcctcctccacctccagcatcagggatcctgcag
cctctgatggctcagcagtttgctccaccacaaccaccgctcatgggcttcatggggcaa
ccaccttatccttttacttctccaccccctcctcctccaggtcctccacctccccgcaag
tag
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