Larimichthys crocea (large yellow croaker): 104921986
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Entry
104921986 CDS
T04659
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03410
Base excision repair
lco04210
Apoptosis
lco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104921986 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104921986 (parp1)
04217 Necroptosis
104921986 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104921986 (parp1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104921986 (parp1)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104921986 (parp1)
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
104921986 (parp1)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104921986 (parp1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104921986 (parp1)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104921986 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
104921986
NCBI-ProteinID:
XP_027139619
LinkDB
All DBs
Position
XI:complement(10477085..10487697)
Genome browser
AA seq
1014 aa
AA seq
DB search
MAESQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTADIGGYSDLRWEDQEKVKKAIESGGATGGKGDQKSGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFKSEYSAAQ
LKGFNALRAEDKEELKKRLPAVKTEGKRKADEVDGVSKKQKKEADDVNKKLEEQLKNQSQ
LIWGIKDKLKKYCSTNDMKELLIANGQEVPSGESNVVDSLADGMAFGALEACKECKGQLV
FKGDAYYCTGDISAWTKCVFKTATPVRKDWVIPKEFHEVPFLKKFKFKAQDRVYPKEAPT
QTLTAAKAEPLASASSAPMERLPEGAPADKPLTGMKLLAVGKLSKNKDDLKAAVEEMGGK
ITGTANKASVCLSTKKEVEKMSKKMEEVRDAGVRVVSEDFLTDIKSSGKALQELVSLHAI
SPWGAEVKVESQAPAAASKSGAMAAKSTGRVKEEEGSSKTKKMKLTVKGGAAVDPDSGLE
NSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSAMDNFLAVYKEKTGNNWGASNFTKYPNKFYPLEIDYGQDEEAVKRLTATAG
TKSKLAKPVQELIKTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQAV
SDCLPESQVLDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNENDPIDINYEKLKTKIEVVDKTTEEAQVILQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGVGRTAPDPSA
AVTLDGVQVPLGKGAHTNIDDTSLLYNEYIVYDVAQVNMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtctcaggaggacaagctttacaaggcggagtacgccaaaagcggccgtgca
tcgtgcaagaaatgcaaagaaaacatcgccaaagactcgctgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttctcttgcttctggcag
cgagcagcagctcagtccacagctgatatcggtggatattcggacctccgctgggaggac
caggagaaggtcaaaaaggccatcgaaagtggaggagcaacaggaggaaaaggagaccag
aagagtggagctaaaggagagaagacgctgaatgactttgcggttgaatatgccaagtca
aaccgcagcacgtgcaaaggctgtgagcagaaaatcgaaaaggatcagatccgtgtatcc
aagaaaactgtggacccggagaagccccagttgggcctgattgaccgctggtaccacacg
gcgtgtttcgtgagccgtagggaggaactggtcttcaagtctgaatacagcgcagcccag
ctgaagggtttcaacgcactacgagcagaagacaaggaggaacttaagaagaggctccct
gctgtgaaaactgaagggaaacgtaaagctgacgaggtggatggcgtgtccaagaaacag
aagaaggaggcagatgacgtgaacaaaaagctggaggagcaattaaagaatcagagccag
ctgatttggggaatcaaggacaagctgaagaagtattgttcaaccaacgacatgaaagag
ctgctgattgcaaacggccaagaggttccctctggagaatcaaatgtggtggactccctg
gccgacggcatggcttttggtgccctcgaggcctgcaaggagtgcaagggccagctggtg
ttcaagggtgacgcttattactgcacaggggacatctcagcctggacaaagtgtgtgttc
aaaaccgcaacgcccgtacgcaaagactgggtcatccccaaggaattccacgaagttccc
ttcctaaaaaaattcaagttcaaggcacaggacagagtttacccaaaggaggctcccacc
caaacgctcaccgcagccaaagcagaacccttggccagcgcatccagtgccccgatggag
cgactaccagagggagcacctgcagacaaaccactcactggtatgaaactgttggctgtg
ggcaagctcagcaagaacaaggatgatctgaaggctgctgttgaggagatgggtggaaag
attaccggcacagccaataaggcttctgtctgcctcagcaccaagaaggaagtggagaag
atgagtaagaaaatggaggaagtgagggacgctggtgtgcgtgtggtctctgaggatttc
ctcacggacatcaagtcgtcgggtaaagccctgcaggagctggtctccctgcacgccatc
tccccctggggggcagaggtcaaagtcgagtctcaggctccagctgcggcctccaagtct
ggagcgatggctgccaagagcacaggcagggtgaaggaggaggaaggtagtagcaaaacc
aagaagatgaaactcacagtgaaaggaggagctgctgtggatccagattcaggtctggag
aacagcgctcatgtcctggagcagagtgggaagatgtacagcgcaacgcttggccttgtg
gacattgtcaggggaaccaactcctactataaactgcagctgctggaggatgatgtacag
aaacggtactgggtgttcaggtcatggggcagagtgggtaccaccatcggaggcaacaag
ctggacaagtttcacgacaagaactccgccatggacaacttcctggctgtctacaaagag
aagacaggcaacaactggggcgcctccaactttaccaaatatcccaataagttctatccc
ctggagattgactatggacaggatgaggaagcagtgaagaggctgacagcgacagccggc
accaaatcgaagcttgccaaacccgtccaggagctgatcaagacgatctttgatgtagag
agcatgaagaaggccatggtggagtttgagatcgacctccagaagatgcccctcggaaag
ctgagcaagaggcagattcagagtgcctacgctctcctcactgaagtacagcaggctgtg
tcagactgtctgcctgagtcgcaggtgctggatctctccaatcgcttctacaccctgatc
cctcacgactttggcatgaagaaacctcccctgctcaacaacctggactacatccaggct
aaagttcagatgctggacaacctgttggatattgaagtggcatacagcctgctgagagga
ggagcccaggacaatgagaacgatcccatcgacatcaactatgagaaactcaaaaccaaa
attgaggttgttgacaaaactacagaagaggctcaggtcattctgcaatacgttaagaac
acccacgctgctacacacaacacgtacacactggaagtgcaagaaatcttcaaaattgtt
cgagagggagagcgccaacgataccgtccgtttgaggagttgcacaatcgccagctactg
tggcacggctctcgcaccaccaactacgctggtatcttgtctcagggtcttcgcattgcc
cctccagaggctccagtgactggttacatgtttggcaaaggtgtgtactttgccgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccccgtaggtctcctcctg
ctggccgaggttgcccttggcaacatgcatgaactgaagaaggcttcccacattacaaaa
ttacctaagggcaagcacagcgttaaaggtgtgggtagaaccgctcctgatccaagcgct
gctgtcactttagacggtgtgcaggtgcctctgggaaaaggagcccacactaacattgat
gacacaagtctactgtacaacgagtacattgtctatgatgtagcgcaggtaaacatgaag
tatctcctgaagatcaagtttaactaccagacgtccctgtggtga
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