Larimichthys crocea (large yellow croaker): 104921999
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Entry
104921999 CDS
T04659
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104921999
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104921999
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Laminin_II
AAA_21
Tropomyosin
SMC_hinge
AAA_29
FANCL_d1
ApeA_NTD1
Motif
Other DBs
NCBI-GeneID:
104921999
NCBI-ProteinID:
XP_027140149
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All DBs
Position
XI:10198166..10212275
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AA seq
1097 aa
AA seq
DB search
MMSKRKSTTVSDKPHKRAKALEEEEVDDANVYDSEQDEQGDQLLGKQAQSAGEVVSDAGI
VESITLKNFMCHSLLGPFTFGSNVNFVVGNNGSGKSAVLTALIVALGGNAQATNRGSSLK
GFVKEGESSADVSITLRNKGRDAYKPEVYGPAIIVDLRITREGLRTYKLRSKSGQIVSTK
KEELLSILDNFNIQVNNPVSVLTQEMSKYFLHSKGEGDKYKFFMKATQLDQMREDFVYIK
TTKHVTEDKVEQHSECLKDLKRKYLEKEDRYKSLESLDEMHTKLEELQKQMAWVLVAEVE
KESDPIKEKLQSDRRATEKYNEKVDEWKNKVEEAEKKQRQTQEQLDGITQQLSELQSKCA
ELKAEVQRQNNTLKQSEVTVHRCKANLRDLEKDKVQLSSRINDLKLSISQTTGVESQART
ERMGQIQTELENLTHQISTLGQQIDQYQHACSRAKEEQGKMRREQEMFQRSTEANRRNLQ
TMESSRSNRLRRFGEHMPTLLNAIQEAHKRGQFKHRPRGPLGYLISLKDPELALAVEVCL
KGQLQAFTCDNHEDERVLQGLMSRVFPPGRRPAIITSHFLSHVHDTRKRAVNHPEYPSVL
QALEIEDPVVANCLIDQRGIESILLIKNRTEARRVMQGKNPPQNCSQAFSKEGDQIFINR
SYTAEQTRANYLSGDVEEEIRHLQREMENQEAQANRFQQQMRKLNEDIKQNEGLLRRTHI
EQKTTKDKATKLQLELTDLKNVEEPQSEDLRPLEEDLQEIVTKISSKRAEFDEARAQMAV
HKASYEKAEQEYKQHKEQINTIAEEADSKKEELSKTDQEVMKCKHHKKHYDDKRSAHLDN
IQTLEANLESKEQELEASIAKATKICPERLEVRRTARSLDSEINRLKVKITTQQEQQGDR
EEVVRQYQEALENYKNMAQQMKNLNSFIKSLDSVMNQRLQVYAELRRFLSARCKYYFDSM
LAQRGYTGSMTFNHKSETLSISVQPGQGNKADLSDMRSLSGGERSFSTVCFVLSLWAITE
APFRCLDEFDVYMDMVNRRISMDMMLKVAAGQRYRQFIFLTPQSMSSLPVSKIIRILRLK
DPDRGQNNSQRSQNEGQ
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaagaggaagagtaccacggtcagtgacaagccccacaaacgggccaaagct
ttggaggaggaagaagtggacgatgcaaacgtgtatgacagcgagcaggacgagcagggc
gatcagctgctgggtaaacaggcacaatctgctggtgaggtggtgagtgatgctggcatc
gtggagagcatcacgctgaagaacttcatgtgtcactctctgctgggccccttcaccttt
ggctccaatgtcaactttgtcgtcggcaataatggaagtgggaagagtgctgttctgaca
gccctcatagttgccttagggggaaatgcacaggccacaaacagaggatcgtccctgaaa
ggttttgtgaaagaaggggaaagctcagctgatgtatcgatcaccctgcgtaacaaagga
agggacgcttacaaacctgaggtgtatggtccagccatcattgttgacctcagaataaca
cgtgaagggttgagaacctataaactgaggagcaaatcaggtcaaattgtctcaacgaaa
aaggaggagctgctatccatcttggacaatttcaatatacaagtcaacaatcctgtgtca
gttctcactcaagagatgagcaaatacttcctacactcaaaaggagagggagataaatac
aagttttttatgaaagctacccagctagaccagatgagggaggacttcgtctacatcaaa
accaccaaacatgtcaccgaggataaagttgaacaacatagtgagtgtttaaaagactta
aagcggaagtacctggagaaagaggaccgttacaagagtctggaatcacttgatgaaatg
cacactaaactggaggagctgcagaagcaaatggcttgggttttggtggctgaggtggag
aaggagtcggacccaattaaagagaaactgcagtctgacagacgtgctacagagaaatat
aatgagaaggtggatgagtggaagaataaggtggaggaggctgagaagaagcaaaggcag
acccaggaacagctggatggcatcacgcagcaactctctgagctccagtccaaatgtgct
gagctcaaggctgaggtccagagacaaaataacactctcaaacagagtgaggtcactgtc
cacagatgcaaggccaaccttagggatctggaaaaggacaaagtccagctatcctcaagg
ataaatgatctgaagttgagcatcagtcagacaacaggagtggagagccaggccaggaca
gagcgtatggggcaaatacagactgagctggaaaatctgacacaccagatctccactctg
ggccagcagattgaccagtatcaacacgcctgcagccgtgccaaggaggaacaaggaaag
atgaggagagagcaggagatgttccagaggtccactgaagccaacagaaggaacctgcag
actatggagagcagtcgttccaatcgcctacgccgttttggagagcacatgcccacactc
ctcaacgccatccaggaagctcacaaaaggggccaattcaagcacagacctcgaggacct
ctgggttatctcattagcctgaaggacccagaactggccctggctgtagaagtgtgcctt
aaaggccagctgcaggccttcacctgtgataaccacgaggacgaacgggtgctacagggc
ctcatgtccagagtgttcccacctggtcgtagacctgccatcatcaccagccattttctc
tcacacgtccatgacacaagaaagagggccgtaaatcatcctgaatacccgtccgttctt
caagctctagaaatcgaggaccctgttgtcgctaactgcctgattgatcaaaggggtata
gagagcatcctgcttataaagaatcgtacagaggctcggagagtgatgcagggcaaaaac
cctcctcagaactgtagtcaggccttctctaaggagggagatcaaatcttcattaaccgt
agttacactgctgagcagactagagccaactacctctcaggggatgttgaggaggagatt
aggcacctacagagggagatggagaaccaggaagctcaggcgaatcgcttccagcaacag
atgagaaagttgaacgaggacatcaaacagaatgaaggactgctgagaagaacccacata
gagcagaagactaccaaagacaaggccacgaagctacagctggagctaactgacctaaaa
aatgtggaagagcctcagtcagaggacctcaggcccctggaggaagatcttcaggagatt
gttactaagatctcgtccaagcgtgcagagttcgatgaggcacgagctcagatggctgtg
cacaaggcctcctatgagaaggcagagcaagagtacaagcagcacaaagagcagatcaac
acgatcgccgaggaggcagactcaaaaaaggaggagctgagtaaaaccgatcaggaggtg
atgaagtgtaagcatcacaagaaacactatgacgacaaacgcagtgcacatctcgacaac
atacagaccctcgaggccaacctggaaagcaaggagcaggaacttgaggcatctatagcc
aaggccaccaaaatctgcccagagcgacttgaggtccggcggacagccaggagtctggac
agtgagatcaaccgtctcaaggtcaagatcacgactcagcaggaacaacagggggaccgt
gaggaggttgtaaggcagtatcaagaggctctggagaactacaagaacatggcacagcaa
atgaagaacctcaacagcttcatcaaaagtctggatagtgttatgaaccagagactccag
gtttacgctgagctcaggaggttcctctcagcgcgctgtaaatactacttcgatagcatg
ctggcccagagaggttacactggaagcatgacgtttaaccacaagagcgaaaccctctcc
atctcagtgcagccgggccagggaaacaaggctgacttgagtgacatgcgctcgctgtct
ggaggcgagcgctccttctccactgtttgctttgttctctctctttgggccatcactgag
gcgcctttccgctgtcttgacgagtttgatgtttacatggacatggtgaacaggaggata
tcgatggacatgatgctgaaggtggctgctggtcagagatacaggcagttcatctttctc
acaccacagagcatgagttctctcccagtgagcaaaatcatccgcatcctccgtctcaaa
gatccagaccgtggccaaaataactcacagaggagtcaaaacgagggccagtag
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