Larimichthys crocea (large yellow croaker): 104922146
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Entry
104922146 CDS
T04659
Symbol
sox11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104922146 (sox11)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104922146 (sox11)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104922146
NCBI-ProteinID:
NP_001304013
UniProt:
M1RKS4
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Position
XXIV:9886270..9906784
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AA seq
366 aa
AA seq
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MVQHTDNSETDGSMSREATDSEESEFMACSPVAINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCAKIAKTPSKKCSKIKTKSGSKSSHGYVEDCVFPSLKVTKTVKSE
LTDEDDDDEYEEDYRMGIKAGDEERLRPYNVAKVPASPTLSSSAESEGTSMYEEVRNNNR
LFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSSSSSSGEDADDLLFDFSLNFAP
SAPGSELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFS
DLVFTY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacagacaacagcgagacggacgggagcatgtccagggaggctacggat
tcagaggaaagtgaatttatggcatgcagtcccgtggcgataaacccagactggtgcaag
acagccaccggtcacatcaagagacccatgaatgcgtttatggtctggtccaaaatcgag
aggagaaagattatggagcagtcgcctgacatgcacaacgctgagatttccaagcgcctc
gggaagaggtggaagatgctcaaggacagcgaaaagatcccgtttatcagagaagccgag
aggctgcggctaaaacacatggctgactaccccgactacaagtacagacccaagaaaaaa
ccaaagctcgacagttcaaaatcatcagcaccgtctccggagaagtgcgcaaaaattgca
aagactcccagcaagaagtgttcaaagataaagactaagagcggctccaagtcctctcac
ggctacgtggaggactgtgtgtttcccagcttaaaagttacaaagactgtgaaaagtgag
ctcaccgatgaggacgatgacgacgagtacgaagaggactaccggatggggattaaggcg
ggggacgaggagcgcctgaggccgtataatgtagccaaagttcctgcgagcccaactttg
agctcctcggccgagtctgaagggacgagcatgtacgaagaagtgcggaacaacaacaga
ctgttttacaatatcaaaaacattaccaagcagagcacattgcacgctgcttctgtctca
ccagcatcctccaggtcggtctccacatcctcctcctcctcctcctccagcagcagcagc
tcctcttctggcgaggacgcggacgatttgctctttgactttagtttaaatttcgccccc
agcgccccaggctcggagctgggcaaccccaattcaggaaacctctccctgtctcttgtg
gataaggacctggactcgttcagtgagggcagcctgggctctcactttgaattcccagac
tattgcacgccagaactcagtgagatgattgccggggactggctggaggcgaacttttcc
gacctggtcttcacatactga
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