Larimichthys crocea (large yellow croaker): 104922184
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Entry
104922184 CDS
T04659
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104922184
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
104922184
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Contactins
104922184
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Others
104922184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set_3
Interfer-bind
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
104922184
NCBI-ProteinID:
XP_010733238
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All DBs
Position
I:complement(15863546..15914317)
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AA seq
1026 aa
AA seq
DB search
MMLPWKQIVLLSITGCLAACTEDVIFQGPRWRTEPSDLILPINSPDQQATIMCEAEGSPT
PQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNMWGSVLSRRASLQ
FAYLDNIKTQTVRSAVNVREGQGVVLLCGPPAHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNTVTKEKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNFQQEDAGTYE
CMAENRRGKNAARGRISFHAKPHWLQTITDTALSIEENLFWECKANGKPKPSYSWLKNGD
QVMAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPLR
ALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLPNGTLKIANVTRRDAAS
YTCIAKNQFGTASTTGRLLITEPTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQRDSDHFERVGGTISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG
PPGPPDKVAVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVVNGN
MLTATVVGLNAWVEYEFRVVARNNVGLGEPSPASTKTRTEDTIPDTAPTDVGGGGGTKSE
LVITWEPVPEEMQNGEGFGYIIAFRPVGTVTWTRAVISTPGVARYVFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIGTVYSAEEVPSVAPKRVRTRSVSAVQIEVIWEALPTVPERVLGY
EVVYWEDDTKPDTIGKVRISGNYTLVNITGLKANTVYYLSVAAFNTAGPGPQSAPINTTT
KKPPPDRAPLNIQWTMIGSTLTLHWDSVVAMETESKVTGYLVLLKRHRYNDITTILTNKT
TVELSLSSNDNYLIQIKAMSEGGEGVGSEPIHIHKLSMGARGSGAIRLSPLYLSAVLISA
LLCSVW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaccatggaaacaaattgttctgctatcaatcactggatgccttgcagcctgt
acagaggatgtcatatttcaagggccaagatggaggacggagccaagtgacctcatttta
ccgatcaactccccagaccagcaggctaccatcatgtgcgaggcggaaggcagccccacg
ccgcagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaacctggacaaggaccaagacacaggagtg
taccagtgcacggctttcaacatgtggggttccgtcctcagccgcagagccagcctgcaa
tttgcatatctcgataatatcaaaactcaaacggtgaggagcgctgtcaacgtccgcgaa
ggccaaggagtggttctcttatgtggaccacctgcacattctggagagctgacatttgct
tggatcttcaatgaatacccgtacttcgtccaacaagacagtcgtcgattcatctctcaa
gagaccggcagtctgtacatcgccaaagtggagccctcagatgttggaaactacacctgt
gtggtaaacaacactgtcacaaaggagaaggtgctcagctctcctacaccgctagtcctc
aggagtgacggagtaatgggtgaatatgaacccaaaatagaagttcatttccctgattca
gttccagctgcgaaggaatctgtggtgaaactggaatgttttgctctgggaaaccctgtc
ccagagataagctggaggagaaccagcggcatcccgttccccagcaaagtcaaaatgaag
aattcaaacgccgtccttgaaatccctaatttccagcaagaagacgcagggacgtatgaa
tgcatggcagagaatcggcgaggcaaaaatgctgcacggggtcgtatttcattccatgcc
aaacctcactggcttcagacaataacggacacggctctgtccatcgaggagaacctcttc
tgggagtgtaaagctaacggaaagcctaaaccatcctacagctggctgaagaatggggac
caagtgatggcagagggccgggtacaaatcgaaaacggggctctctctatagctgcatta
aacctgtcagattccgggatgtatcagtgtgtggctgaaaacaaacatggcattatatat
tccagtgcccaactaatggtgttagcttcacctcccagcttctccaaaagtccattaagg
gccttgctaaaagctcgctcaggcagcgaagtcactcttgaatgcaagcctcaggcctcg
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagagaactgaaaggatt
actctacttcccaatgggacgttaaagatcgccaacgtaaccagacgggatgcagcgagc
tacacgtgcatcgctaagaatcagtttggaacagcaagcacgaccgggaggctgcttatc
acagagcccacaagaatcaccatgaggccgactaacatggagattattgttggcgagagc
atcgtgttaccctgccagattgcctgcgatccagctctggatgtgtctttctcgtgggca
ttcaacggccagctcatcgacttccagcgagacagcgatcatttcgaaagagtgggcggg
accatatcgggggatctgatgattcgtaacatccagctgaaccatggagggaaatatgtg
tgcgttattgacaccgatgtcgagagcctgtccacctctgccatcttggtcgtcaaaggt
ccgccaggtcctccggataaggtagcagtggaggagatcacagacagcacggcgcagctt
tcctggactcccggaagggacaacggcagccccatcaccggttacatcatccaggctcgg
acgccgttcacagtgggctggcaggctgttgacacagtgccagaggtggtcaatggcaac
atgctgacagccacagtggtgggtctgaacgcctgggtggagtacgagttcagggtggtg
gcccgcaacaacgtaggcctcggagagccgagcccggcctcgaccaagaccaggacagag
gacaccattcctgatacagctcccactgatgttggaggtggaggaggcaccaagtctgaa
ttagtgataacatgggagcctgttcccgaggaaatgcagaacggagagggcttcggctac
atcatcgccttcaggcccgtgggcacggtcacgtggacgcgggcggttatctccacacct
ggcgtggcgcgctacgtcttccgcaacgacaccatcccacccttctcgccctttgatgtg
aaagtgggggcgtacaacaaccgaggggaggggcccttcagctctattggcaccgtgtac
tcggcagaggaagtccccagtgtggctcctaagagggttaggactagaagtgtgtctgca
gtgcaaattgaagtgatctgggaagctctccccaccgtccctgaaagagtgcttggatat
gaggtcgtgtactgggaagacgacaccaaacctgacaccattggcaaagttcgcatatct
ggaaactacacgctggtgaacattacggggctgaaagcgaacacggtgtactacctctct
gtggcggccttcaatacagccggccctgggccacagtctgcgcctatcaacaccaccaca
aagaaaccacctccagatcgggctccactcaacatacaatggaccatgattggctccaca
ctcacgctccactgggattctgtagtagctatggagacggagtcaaaggtcactggatat
ttggtgctgctgaagaggcatcgctacaatgacatcaccactatcttgaccaacaaaacc
actgtggagctcagcctctcctccaatgacaactatctcattcagatcaaggctatgagc
gagggtggagaaggtgtgggcagtgaacccatccacatccataaattaagcatgggagcg
cggggttcgggagcgatccgcctcagcccattgtacctctctgcagtcctcatcagtgca
ctgctctgctccgtctggtga
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integrated database retrieval system
