Larimichthys crocea (large yellow croaker): 104922204
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Entry
104922204 CDS
T04659
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104922204 (traip)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104922204 (traip)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104922204 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_11
Lzipper-MIP1
zf-C3HC4_4
zf-RING_Vps41
Gp58
zf-RING-like
Filament
RING_XB3-XBAT31
zf-RING_16
USP8_interact
TSNAXIP1_N
Zn_ribbon_8
RINGv
GAS
zf_RING_Vps8
KASH_CCD
Ntox10
SLX1_C
zf-Nse
Spectrin_Anc-1
DUF6776
Motif
Other DBs
NCBI-GeneID:
104922204
NCBI-ProteinID:
XP_010733270
LinkDB
All DBs
Position
I:15103199..15107000
Genome browser
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVSAIHCGHTFHYECLLKWFQTAPTKTCPQCRKQVSTRHIIN
KLFFDIGGEEEATADPESLQNELDRMKVLLSSKERDWRDKQKATDNLKEIVEKQRRDLDS
VRKEIMEKEMLCSALRKQMTYLETQHNEVQAAKDEAWRLRTKMKTFESLDVLLQGQRAEV
ESMITDMGVSQSAVEQLSIYCISLKKEYDNLKGSLKSSNDMCEKLKREVLASNNKSHKAS
LEVTKTKEDMKSLQKDLANADKEISSLKKKVEFLQRSLSTPTRTNEALSRLVFESPAPMD
LKQPCFRQPAGTEDIDLNMTYDITTPDDVAKRPSKVPSKKIRLDPPASSLSKHSEKSSCP
SKAHDEDGSMDPFLRNSLLFRKKTFGSMLDPQRKPGVLRTGYDGLGGRTKFIQPSPLSEI
RPLMKAKRKKVTRPPPKIATCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatactgcacgatttgctccgatttcttcgatcactccagagatgtt
tctgccatccactgcggacacactttccactatgaatgtctcctcaagtggtttcagaca
gccccgacaaaaacctgcccacagtgtaggaaacaggtcagcaccagacacattatcaac
aagctgttctttgacatcggtggagaggaggaggcaacagcggacccagaaagcttgcag
aatgagctcgatcgaatgaaggtgcttttaagctccaaagagcgagactggcgggacaaa
cagaaggcaacggacaacttgaaggagatcgtggaaaagcagaggagagacctggacagt
gtgcggaaagagattatggaaaaggagatgctgtgttctgccctcagaaaacagatgaca
tacctggagacgcaacacaatgaagttcaggctgccaaggacgaggcctggagactgagg
accaaaatgaaaacgtttgaaagcctggacgtgttgttgcagggccagagagcagaggtg
gagtccatgatcacagatatgggtgtcagccaatcagcagtggagcagctatccatctac
tgcatctcgctcaaaaaagagtatgataatctaaaaggaagtctgaagtcttcaaatgac
atgtgtgagaagctgaagagagaagtgctcgcctcaaacaacaagtcacacaaagcctca
ctggaggtgactaagactaaagaggacatgaagtctctgcagaaagatctggccaatgct
gataaagagatctctagtctgaagaagaaagtggagtttctccagaggagtctgagcacc
ccgacacggacaaatgaagccctcagtcggctcgtctttgaaagtccggctccgatggac
ttgaagcagccttgctttcgccagcctgcaggtaccgaagacattgacctcaacatgact
tatgacatcactacaccagatgatgtggccaagaggccgtcaaaggtcccatccaagaag
atacgactcgaccctccggcgtcatctttgtccaaacacagtgagaaaagttcatgtcca
agcaaggctcatgatgaggatggatccatggatccttttttgaggaactccctcctcttc
agaaagaagaccttcggtagcatgttggaccctcagaggaagcctggagtcctgagaact
ggttacgatggtttaggaggacgcactaaattcatccaaccttctcctctatcagagatt
cgcccgctgatgaaagctaaaaggaagaaggtgaccaggcctccacccaagattgcgact
tgcctgacactggacagcttcctcgagtaa
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