Larimichthys crocea (large yellow croaker): 104922223
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Entry
104922223 CDS
T04659
Symbol
atxn1
Name
(RefSeq) ataxin-1 isoform X2
KO
K23616
ataxin 1/1L
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104922223 (atxn1)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
104922223
NCBI-ProteinID:
XP_019123918
UniProt:
A0A6G0HSA5
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Position
XIII:44256258..44346726
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AA seq
813 aa
AA seq
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MKSNHERSNECLPPKKREIPSSTLPSEIRSPIMPPASDSQHTENMAWLASVAGGNESSVG
GHRSSSQSDGPQYKSLFSTSDSSSSSSSLRLVSSLPTVYTSALSQPTVGGTVHYTQLPPN
LQFIASPYTAPYTGYISPQLLPPPPPPPPLSSSSLAAQRPSHTETVCAPSQASKHDQQRA
SMGRTSMPPPSTDPTPHHVQLSTSPRTVPSPHHQGGVQFPHQSLHPHHTLGHGMSQVVVQ
YTDGPTRKEEICSRPRELHNGELERGRRYGASPESSLSKSGSKSRDITSLSSYEARQLVL
PSEYSTHDPSGLRTSVMLMPNSHGDHQMVPPRASPEKLTTSASTHLEKGGIILGKPVNRT
PSSSSNTTSSFTFPPPLSVNSLKAAVSTLSPQTVIQTTHNATESLSMGLPSTSIYPQPPI
IGYIAGGNGSQHTPISYHTSLQQHLLIPGTQPVIIPVSGGGVTTLEPVTSHVTSSTQATF
PTTLPHTYIAATAPKGETLETSSGSFHQAASGGVVQAQLHLPIVPAPPGLVAPSAPPTQS
NAVVPPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIEGSH
TSPNFAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDV
CISLTLKNLRNGSLKKTQPLELATPAFSYGHLKSHRAVLDAPQSCSGGGSRHSERENGIS
QRGKGGSGNGSGAGTNVENGDLMFGERGSVSKGQVSAEAGCSKSSGGRKRRWSAPEGRKV
EKSEEEPPLTLPKPSFIPHEVKVSIEGRSNIGK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccacgaacgcagtaatgaatgtctgcccccaaagaagagggagatcccc
tcaagtacattaccatctgaaatccgctcacccatcatgccacctgccagtgacagccag
cacactgagaacatggcctggcttgccagtgtggcgggtgggaatgagagtagcgtaggt
gggcatcgtagctccagtcagtctgacgggccccagtataaatcgctcttctccacttca
gactcttcatcctcctcttcatcactgaggctagtctcatctcttcccacagtgtatacg
tccgccctgtcacaacccacagttggaggaactgtccattacacccaactgccacccaac
ctgcagtttatagcctcaccctacactgccccatacacaggctacatctcccctcaactt
ctcccaccccctcctccacctccccccctctcctcctcctctctggccgcacagagaccc
tcacacacagagacagtctgtgctccttcacaggcctccaaacatgaccagcagagagca
tccatggggcgtacctccatgcctccaccttctacagaccccacccctcaccatgttcaa
ttgtcaacctctccacggactgtgccatcgcctcatcaccaaggaggtgttcaatttcct
caccagtcactgcacccccaccataccttgggacatgggatgtcccaggttgtggtgcag
tacacggacggaccgaccaggaaagaggaaatttgctccagacctagagagctccacaat
ggagagctggaaaggggtcggcggtatggagcatccccagagtccagcctctccaagtca
ggtagcaaatcacgagacatcacttctttgtcctcctatgaggcccgccagctggttctg
ccatcagagtactctactcatgatccctcagggctgagaacctctgtaatgcttatgcct
aacagccatggggaccaccagatggtaccacccagagccagccctgagaagctgacaacc
tctgcctctacacacctggagaaaggtggcatcattctgggcaagcctgtcaatcgcaca
ccctcctcctcctccaacaccacctcctctttcacgtttccaccaccattaagtgtcaac
agcctgaaagctgctgtcagcacgctatcgccccagaccgttatccagaccacccacaat
gctacagagtcactgtcaatggggctgccctccaccagtatctaccctcagccacctatc
attggttacattgcagggggcaatgggagccagcatacgccaatcagctaccacaccagc
ctacagcaacacttactcattcctggcacccaaccagtcattatccctgttagtggaggt
ggagtcaccacattggaacctgtaacctctcacgtaacatcatctacacaagcaacattt
cccaccacactcccacacacatacattgctgccactgcccccaaaggagaaactctggaa
acctccagcggctcgtttcaccaggctgcttcaggtggagtggtccaagcccagctccat
cttcccattgttcccgctcctccaggattggtcgctccttctgctccacctactcaatcc
aatgcggtggtgcctccctcactccccccatacttcatcaagggctccatcatccagctg
gccgatggagagctgaaacgtgtggaggacctgaagacagaggacttcatccagagtgcc
gagatcagcagtgagctgaagatcgactcatccacagtggagcgcattgaagggagccac
acctcacccaactttgctgtggttcagttttctgttggtgagcaccgtgcacaggtgagc
gtggaggtcttggtggagtacccctttttcgtcttcggccaaggctggtcttcatgctgc
cctgaccggaccactcagcttctggagctgccttgcaccaagctttctgtgggcgatgtt
tgtatttcactcaccctcaagaacctgaggaacggatccttgaagaagactcaacccctg
gagctggctacccctgccttcagctacgggcacctcaaatcccacagagccgtcttagac
gctccccaaagctgcagtggaggaggctccaggcacagcgagcgggagaatggcatcagc
cagcgagggaaaggtggaagtgggaatgggagtggagcgggcaccaatgtggaaaacgga
gatctcatgttcggggaaagagggtcagtttctaagggtcaggtcagcgcagaagctggc
tgcagtaagtcttcaggaggcaggaagcggagatggtctgcccctgaaggtcgaaaagta
gaaaaatcagaggaggagccgcccttgaccctgcccaagccttccttcatccctcatgag
gtgaaagtcagcattgagggaaggtcgaatattggcaagtga
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