Larimichthys crocea (large yellow croaker): 104922247
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Entry
104922247 CDS
T04659
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104922247
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104922247
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104922247
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
104922247
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104922247
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104922247
Prokaryotic type
104922247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
GST_C_7
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
104922247
NCBI-ProteinID:
XP_027145509
LinkDB
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Position
XVI:complement(4235579..4245496)
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AA seq
1277 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALVAAEFCPSSRPRILKEDPPAALNARSRPTLVLGAGDGDSVL
CGATAVSWYLASQGKKAGVDVKQQSQVWQWLSFADNELNPVSCAVVFPLMGMMGVDKKLQ
QSSRAELMRVLKVLDQTLEPRTFLVGESITLADMAVATAVLLPFKYVLEPSDRKVLTNVT
RWFTTCINQPGFLNVLGKIALCEKMVPVTPKTNAAANAQAANASPAVDSADAATNGPPKT
EAQLKKEAKKREKLEKFQQKKEMEAKKKTQPPTEKKAKPEKKELGVITYNVPTAPGEKKD
VISPLPDSYSPQYVEAAWYPWWEKQGFFKPEHGRKNISEQNPRGTFMMCIPPPNVTGSLH
LGHALTNAIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGISRHDLGREK
FIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDSKLSYAVQEAFIRMHDEGVIYRS
KRLVNWSCSLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIV
ATTRIETMLGDTAVAVHPADSRYQHLKGKMVLHPFCDRKMPIVFDDFVDMSFGTGAVKIT
PAHDHNDYEVGERHNLPFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDRGQFKEI
KDNPMVVPVCSRSKDIVEPLMKPQWYVSCTDMGKQAADAVREGRLKIIPDHHLKTWFNWM
DNIRDWCISRQLWWGHRIPAYFVTVSDASVKPGEDMDGHYWVSGRTEDEAREKAAKRFNV
SADKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARM
VMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLTDSN
LDPLEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKL
WNAVKFAMKTLGDNFVPSEKAQLCGDESVSDRWILSRLCAAVGLCDAAFKAYDFPAITTA
IYNFWLYELCDVYLESVKPVFGKAEEDSTSQRQALVCRQTLYTCLEVGLRLLSPLMPFVT
EELYQRLPRRQPQSDPPSISVTSYPDTEELCWHSEEVDRDMEFIMTVVKTIRSLRADYNL
TKTRADCYLQCIDSATASLVQKYSLQIQTLSYSQAIIPLTATEPVPEGCAVAIASDRCTV
NLMLKGLIDVEKEVAKLMTKKGDLEKQMEKLREKIGKSDYKEKVPVKVQEQDAEKLRQSQ
TELEKVKEAMDNFRKMM
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtgtcccctcaccctgatgacttcaggagtcttctggctctcgta
gctgctgagttttgtccgtcctctcgcccgaggatcctcaaagaggaccctcctgcggct
ctgaatgcccgttcgagaccgaccctggtgctgggcgccggggacggtgactccgtcctg
tgtggggccactgccgtgtcctggtacctggcctcacaggggaagaaggctggtgtagat
gtaaagcagcagagccaggtgtggcagtggctcagctttgcggataatgaactgaacccg
gtgtcctgtgcggtggtcttcccactgatgggtatgatgggagtggataagaagctccag
cagagttctcgtgccgagctgatgcgtgttcttaaggttcttgatcagactctggaacca
agaaccttcttggtgggggagagcatcaccctggctgacatggctgtagccacagctgtt
cttctaccttttaaatatgtgttggagccatcggacagaaaggtcttgaccaatgttacc
aggtggttcacaacctgcataaatcagccagggttcctgaacgtgttggggaagatcgct
ctttgtgagaagatggtgccagttacaccaaagacgaatgctgctgcgaatgcccaagct
gctaatgccagtccggctgttgattctgcagacgctgcaactaatggcccaccaaagaca
gaagcccagctgaagaaggaagcgaagaagagggaaaagctggaaaagttccagcagaag
aaggaaatggaggcaaagaaaaagacacagccaccgacagagaaaaaggctaaacctgag
aagaaggagttgggagtgatcacatacaatgttcccactgctcctggggagaaaaaggat
gtcattagtccgcttcctgactcctacagtcctcagtatgtggaggctgcctggtatcca
tggtgggagaagcaggggttcttcaagcctgagcatgggaggaagaatatcagtgagcag
aaccctcgcggcaccttcatgatgtgtatccctccacccaatgtgactggatcacttcac
ctgggtcacgccctcaccaacgccattcaggatactctcaccagatggcacaggatgcga
ggtgagaccaccttgtggaacccgggctgtgaccacgctggtatcgccacccaggtggtg
gtggaaaagaagctgatgagagagaggggtataagccgccacgatctgggcagagaaaaa
ttcatccaggaagtctggaagtggaagaacgagaagggagaccgtatctaccaccagctg
aagaagctgggctcctctctggactgggacagagcctgcttcaccatggactctaaactt
tcttatgcagtccaagaggcctttatccgcatgcatgatgaaggcgtgatctacaggagc
aagaggctggttaactggtcctgctcactaaactctgcgatctctgacatagaggtggat
aagaaagagctcaccggcaggactctgttgcctgtgcctggttacaaagagaaagtggag
tttggcgttttggtgtctttcgcctacaaggtggacggatcagacgaggaagtgattgtg
gcaacaactcgtattgagactatgctgggagacactgctgtcgctgtccatccagctgac
tccagatatcagcatctgaaggggaaaatggtgctgcaccccttctgcgaccgcaagatg
ccgattgtcttcgatgactttgtggacatgagctttggaacaggtgctgtcaaaatcacc
ccggcccatgaccataatgactacgaggttggcgagagacacaatctgcccttcatcaac
atcttggatgagaatggcctgctcattaacgtgcctccccccttcctgggcatgaagcgc
tttgaggccaggaaggccgttcttcaggctctcaaggacagaggccagtttaaagaaatt
aaagacaaccctatggtcgtcccagtctgcagtcgctccaaggacatcgtggagccgctg
atgaagccgcagtggtatgtgagctgcaccgatatgggcaaacaggccgcagacgcagtc
agagagggtcggctaaaaatcatccccgatcaccacctgaagacgtggttcaactggatg
gataatatcagggactggtgcatctctcggcagctgtggtggggtcaccgtattcctgct
tactttgtcactgtcagtgatgcctctgtgaaaccaggggaggacatggacggtcattac
tgggtgagtgggagaacagaagatgaggccagagagaaggcggcaaaacgcttcaacgtg
tctgctgacaaaattacactcaggcaggatgaggatgttctggacacttggttctcatct
ggcattttccctttctccatcttcggatggcctaatgagacccaggacctgaatgtgttc
taccccggcaccttgctggagacgggtcatgacattctgttcttctgggttgctcgtatg
gtgatgatgggcctcaaactgactggcaagctgcccttcaaagaggtttatctacatgca
gtggtgagagacgcccacggaaggaagatgagcaagtctcttggcaacgtcattgaccca
ctggacgtcattacaggaatctccctggagggtctacatgcccagttgacggacagcaac
ttggatccactggaggtggagaaggcaaagcagggccagaagtcagactacccaaatggc
atcccagagtgtggcacagatgctctccggttcgccctgtgtgcctacactagccaaggt
agggatatcaatctggatgtcaaccgcatcctgggttaccgtcacttctgtaacaaactg
tggaacgctgtgaagtttgccatgaagacgctgggggacaactttgtaccatcagagaaa
gcccagttgtgtggagacgagagtgtatcagacaggtggattctgtcgagactgtgcgct
gctgttggcctctgtgacgctgccttcaaggcctatgactttccagccatcacaaccgcc
atctacaacttctggctgtacgagctctgcgacgtctacctggaaagtgtgaaaccggtg
ttcggtaaagcggaggaagacagcacgagccagagacaggcactggtgtgcagacagacc
ctttacacctgtttagaagttggtctgcgccttctgtctcccttgatgcccttcgtcact
gaggagctctaccagaggttaccaagacgacaacctcagagtgatccacccagcatcagc
gtcacatcttaccctgacacagaagagctctgctggcacagcgaggaggtcgaccgcgac
atggaatttataatgactgtggtcaagaccattcggtcactgagggctgactacaacctg
accaaaaccagagctgactgttaccttcagtgcattgactctgcgactgcctccctggtg
cagaaatacagtttgcagattcagaccttgtcttattctcaggccatcatccctctgaca
gccaccgagcccgtcccagaaggctgtgctgtggctattgcctctgacagatgtactgtc
aaccttatgctcaagggtctcatcgacgtggagaaggaagtggctaaactgatgacaaag
aaaggtgacttggagaaacagatggagaaactgagagagaagattggaaagagtgattac
aaggagaaggtgccggtgaaggtgcaggagcaggatgctgaaaagctacgacagagccaa
accgaacttgagaaagtgaaagaagccatggacaacttcaggaaaatgatgtaa
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