Larimichthys crocea (large yellow croaker): 104922266
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Entry
104922266 CDS
T04659
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lco04054
]
104922266
Pattern recognition receptors [BR:
lco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
104922266
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_14
TIR_2
LRR_1
LRR_9
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
104922266
NCBI-ProteinID:
XP_010733358
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Position
XIII:complement(29580156..29584494)
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AA seq
981 aa
AA seq
DB search
MASLIHQLLSVAVVLDAVQLISGYSFNNCIEDQNKEKTFNCIERRTNNISAIVNDLPSST
INLNISFSRVSHIPNKTFVNLPNLQSLRLDHNHLTTIDPFAFKDLTQLTHLNLTSNNLSE
LNPSLFKDLHSLVFLSLVNNTLKQLPEGIFLNVPNLDTLLIRQNFLTNFSEIAESVSNLT
RLRILDLCFNNFTSLGHSNVSLPQNLTTLYICRNNLSTLGCNHWFFSFIQLLDLSYNPRL
PTEAFQGMDLRNVKYLRLRSTSVKIIEFLNMSNIYAGHVDFSNTGLKNDSLLMGLCRLLK
RKVKVIRNLNLVSNEIQNITNDALRYCPKIKVALDLSRNELKSVDCLNFLKDQIDIKGFS
AEHNHLTGLPKCKTQNMVYFKKLEEVSYRYNRILSVGSHAFYHTPNIKTLKLNINTIAYL
DLEAFKGLKELETLRLDNNLLTDLFKKTFEDLHSLQVLNLRNNRISVIFNETFFNLRNLT
TLDLGGNKITYFQPSGLNGLKRLSKFYLDGNNLKTIDTSHYREFQNTLTVLDLKGNQICF
RTGKFTFSPFVNFRKLSDLKLDAQQPHGLTAIPRNFFRGLYSLKSLYLTNNKIFHLPPDA
FDDLTELRFLSLDDCCVGVTQLEPGVFKNLRNLTKLAVENIGIQNFSKEVFGNLTKLRTM
QLNHNVMQSIDVDALQSLTKLHYLDLRNIPLSCTCENTLLRNWTVHNPNVQVVYLYSLSC
PHNPGHKFYNFDSKVCFIDLGKYMFLSTAIVIFLFTVTPLLYVKLYWKMKYGYYVFRSWF
SEQWRRLRDEEENCKYDAFISYNSSDEQWVMDELLPNLEGNGSSFKLCLHHRDFELGRDI
VDNIVSAVYGSRKTICVVSRNFLKSEWCSLEIQLASYRLFDEHRDVLLLVFLEPIAERHL
SSYHRMRKIMLKKTYLQWPGLDCTDPTQAQDLFWNQLRRAIRTGSRLETVETYESDKRVT
EETEDQMKVIETSDENFYLQP
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcttattcatcagcttctgtcagttgcggttgttcttgatgctgttcaactc
atcagtggttacagctttaacaactgcattgaagaccagaacaaagaaaaaactttcaat
tgcatcgaaagaaggaccaacaacatctcggctattgtaaacgacctgccgtcatctacc
attaatctcaacatctcttttagtcgtgtgagccacattcccaacaagacctttgttaac
ctaccaaaccttcaaagcctcagactggatcataatcacctgacgaccatcgacccattt
gctttcaaggacttaactcaacttacgcatctaaatctgacctccaacaacctttcagag
ctcaacccttctctgtttaaggatctgcacagccttgtctttctctcactggtgaacaat
acactaaagcagcttcctgagggcatttttcttaatgttcccaatcttgacactttactc
ataaggcaaaactttctgacgaatttctcagagattgctgaatctgtgtcaaatctaaca
cgcctgagaatactagatctttgctttaataattttacctctctcggtcactcaaatgtg
tcactaccccaaaacctcactacgctatatatatgtagaaacaacctgtctacattagga
tgtaaccattggtttttcagcttcatccagctactagatttgtcatacaatcctaggctt
cctacagaggcttttcaaggaatggatttaaggaatgtaaagtatctgcgcctacgttca
acaagtgtcaagataatagagtttttaaacatgagcaacatctatgcaggccatgttgat
ttctctaacacaggtctaaaaaatgacagtctgctcatggggctgtgcagactgttaaag
agaaaggtgaaagtgattagaaatttgaacttggtgagtaatgagattcagaatataaca
aatgatgcactgcgctattgtcctaagatcaaggtggctttggatctatcccgcaatgaa
ctgaaaagtgttgattgtcttaactttctcaaggatcagatagatataaaaggctttagt
gcagaacataaccatctcaccggccttccaaaatgtaaaacacaaaatatggtttatttt
aaaaaactggaagaggtgagctatcgttacaaccgcatcctttcagttggctctcatgct
ttctatcatacaccaaatattaagactttaaaacttaacataaacacaattgcttatctt
gatcttgaagctttcaaaggtttaaaagagcttgagactcttcgtttggacaataacctc
ttgactgatctgttcaagaagacatttgaagatcttcacagcctacaagtccttaaccta
cgtaacaaccgtatttcagtcatttttaatgagaccttcttcaatctcaggaatctgact
acactggacctaggaggtaacaagattacttattttcaaccatctggccttaatggacta
aaacgtctgtccaaattctatctagatggaaacaatcttaaaacaattgacacttcccac
tatcgcgaatttcaaaacactctaacagtgctggatttaaaaggcaatcagatttgtttt
cgcactggaaaattcactttttcaccatttgtgaatttcagaaaactcagtgatctgaaa
ctagatgcgcagcagccacacggcctcaccgctataccccgcaattttttccgtggcctc
tactcgctgaaatctttgtatctcaccaacaataagatctttcatcttcctcctgatgcc
tttgatgatctgacagagttacgtttcctctcattggatgactgctgtgttggggtgaca
caactagagcctggagtttttaaaaatctaagaaatttgaccaagttggctgtagaaaat
attggcattcagaatttctctaaggaggtttttgggaatcttacaaagttacgcacaatg
cagctcaaccacaatgtgatgcagagcatcgatgttgatgcactgcaaagtttaactaaa
ctccactatcttgacttacgtaatattcctttaagctgcacctgcgagaacaccttgctg
agaaattggacagttcataacccaaatgtccaggtggtctatctctacagtctgagttgc
ccacacaatccaggacacaaattctacaactttgatagcaaggtttgtttcatagatcta
ggaaagtacatgttcttaagtacagcaattgtgatctttttgttcacagtcactccttta
ctttatgtcaaactctactggaaaatgaagtacggctactatgtgttccgctcctggttt
agtgagcagtggcgcagactcagagatgaggaggaaaattgcaaatatgatgcgttcatt
tcctataattcctctgacgaacaatgggtcatggacgagttgctgcccaacctagaggga
aatggatcgtcttttaaactttgcctacatcacagggactttgagctgggccgtgatatt
gtggacaatatcgtctctgctgtgtatggcagccggaaaactatttgtgtggtgagcaga
aatttcctaaaaagtgagtggtgttctctggaaatccaactggccagctacagactgttt
gatgagcaccgggatgttctcctgctcgtgtttctggagccaatcgctgaaaggcacttg
tcgtcctatcaccgcatgaggaaaatcatgttaaagaagacttatctgcagtggcctggc
ttagactgcactgacccaactcaggcccaagacctattttggaatcagctacgtagggca
ataagaacggggagtaggctggaaacggtggaaacttatgaaagcgataaacgtgtaact
gaagaaactgaagatcagatgaaggtgattgagacatcagatgaaaacttttacttgcaa
ccttga
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