Larimichthys crocea (large yellow croaker): 104922402
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Entry
104922402 CDS
T04659
Symbol
epas1
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
lco04140
Autophagy - animal
lco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104922402 (epas1)
04137 Mitophagy - animal
104922402 (epas1)
04148 Efferocytosis
104922402 (epas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104922402 (epas1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104922402 (epas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
PAS_8
Motif
Other DBs
NCBI-GeneID:
104922402
NCBI-ProteinID:
XP_010733559
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Position
XVI:complement(14910484..14917471)
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AA seq
378 aa
AA seq
DB search
MTADKEKRRAISREAARRRRRVESDVFGDLARLLPLQPSVRAHLDKPSVIRLTLSYIRTQ
TLLRGKTGTKTPVQSSHTVKNGQVTEGGEEQRERDGERDVEEKKNKDVATLEETNMYLRV
LEGFLVVLSTVGDIIFLSDNVSKYMGLTQTELMGHSIFEFTHPCDHEEIRNNLRLTAEEV
WCGAKRDFVMRIKSALTHRGRSANLKSATWKVLHCQGRAKVCLTPSSVSCLVLTCQPLPL
SHTLLSTHTFTSQHSMDMRFTYCDQRVALLLGYSPEELLGRSIYDLCHTLDTNCLTKNHL
NLCFKSQSVSGQYRMLVKGGGYVWVESHSAVIPSVRPSKSRPSGHQPLCILCVTYVLSGV
EEPTLQLSLEQTGHRYMR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaaggagaagagaagggcgatcagccgcgaggcagccagaaggagacga
cgggttgagtctgacgtttttggagatttggctcgtctcctgccgctccaaccgtccgtc
cgagctcacctggacaagccttcggtcattcgcctcaccctcagctacatacgcacacaa
acactgctcagagggaagactggaacaaaaactccagtccagtccagccatacagtaaaa
aatggacaagtgacagaaggtggagaggaacagcgagagcgtgacggagaacgtgatgtg
gaggagaaaaaaaacaaggatgtggcgactttggaggagacaaacatgtacttgagggtc
ctagagggattcctggtggttctgtccactgtgggagacataatcttcctgtctgacaat
gtcagcaaatacatgggcctgacacagaccgagctgatgggacacagtatttttgagttc
actcacccttgtgaccatgaagaaatcagaaataatctacgtctaacagcagaggaagtt
tggtgcggcgcaaagagggactttgtcatgaggataaaaagcgctctgacacacagagga
agaagtgctaacctcaagtcagcaacatggaaggttctccactgtcagggcagagcaaaa
gtgtgtctcaccccgtcttcggtttcctgcttggtgcttacctgccagcctctgccactc
tcacacacactcctcagcacacacaccttcaccagccagcacagcatggacatgaggttc
acatactgcgaccagagagtggcgctgctgttaggttacagtcctgaggagcttctgggt
cgttctatctatgatctctgtcacacgttggacacaaactgtttgacaaaaaatcatctg
aacttgtgttttaagagccagtcagtcagtggtcagtacaggatgcttgtgaaaggtgga
ggttacgtctgggtggagagtcacagtgccgtcatacccagcgtccgaccatccaaatcc
aggcccagtggccatcagccactctgcatcctctgtgttacctatgtcctcagtggagtg
gaggagccgaccctgcagctctctttggaacagactggccacagatacatgaggtga
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