Larimichthys crocea (large yellow croaker): 104922479
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Entry
104922479 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104922479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104922479
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
hnRNP proteins
104922479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
104922479
NCBI-ProteinID:
XP_027137843
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Position
IX:complement(4926118..4937170)
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AA seq
430 aa
AA seq
DB search
MEVKIEEQDEDNTFSNTDTNGKRPAEDMDEEQAFKRSRNADEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGEILLKIIPTLEEYQHYSGIDF
DSELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVI
ECIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMLFEERGRRPIGGFPIRVRGGFE
RMPPVRGNRPMPPSRRDYEDMSPRRGPPPPLSRGGRGGSRARNLPLPPPPPPRGGGDRFS
HGSYHSSMDDRPSDRRSRGDRYDSMSGGGYDNNSSWEHFQSGGRGSYSDIGGPVITTQVT
IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN
SVRQYSGRFF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaaatcgaagagcaggacgaagacaacacattcagtaacaccgacacgaat
ggtaaacgtccagctgaggacatggacgaggagcaagccttcaaacgttctcgcaacgcg
gacgagatggtggagcttcgcgtgctgctccagagcaaaaatgctggcgctgttattgga
aagggtgggaagaacataaaagctctacgcacagactacaatgccagtgtatcagtccca
gacagcagtggcccagagcggatcctgagcgtaaatgccagcatcgacacaatcggagag
attctgttgaaaatcatacctactctggaggagtaccagcattacagcgggattgatttc
gacagtgagcttcgcctgctgatccatcagagcttggcagggggcatcatcggggtaaaa
ggtgccaagataaaggagctgagagagaacacccagaccacaatcaagttgttccaagag
tgctgtccacactccactgacagagtcgtgttggtgggaggaaagccagaacgtgtcatt
gaatgtataaaagtcatcctggagctggtgtcagaggcaccaatcaaaggtcgcgcccag
ccttatgaccctaatttctacgatgaaacgtacgactacggcggtttcaccatgttgttc
gaagagagaggcagacgacccatcggtggcttccctatccgtgtgcgcgggggcttcgag
cgcatgcccccagttcgcggcaacagacccatgcctccctccagaagggactacgaggac
atgagcccccgccggggtcctccaccaccgctgagcagaggaggacgagggggcagccga
gcacgtaatctgcctcttcccccgccaccaccgccaagaggagggggagaccggttctca
catggcagctatcatagcagcatggacgacagaccaagtgacagaagaagcagaggagac
cgttatgacagcatgagtggaggcggatatgacaacaattcttcctgggagcactttcag
tccggcggtagaggctcatacagtgatatcggaggcccagtcatcacgacacaagtcaca
atcccaaaagacctggctggctccatcatcgggaagggcggccagaggatcaagcagatc
cgccatgagtctggggcatctatcaagattgatgaaccactagagggctctgaggaccgc
atcatcaccatcacaggaacacaggaccagatccagaacgcccagtacctgctgcagaac
agcgtgaggcagtactctggtcggttcttctag
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